RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 ARHGAP27Q6ZUM4 889 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 TMC3Q7Z5M5 1100 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 CCDC84Q86UT8 332 aaPredicted RBP7.05□□□□□ -1.28
CCDC6-202ENST00000491922 STAG2Q8N3U4 1231 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 CCDC82Q8N4S0 544 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 ANKRD13CQ8N6S4 541 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 FANCBQ8NB91 859 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 PLBD2Q8NHP8 589 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 ATXN2LQ8WWM7 1075 aaKnown RBP7.05□□□□□ -1.28
CCDC6-202ENST00000491922 P2RX5Q93086 422 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 DTNBP1Q96EV8 351 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 FAM167BQ9BTA0 163 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 EDEM3Q9BZQ6 932 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 INCENPQ9NQS7 918 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 TMEM2Q9UHN6 1383 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 GPR75-ASB3A0A0A6YYF3 556 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 DPPA5A6NC42 116 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 LRRC53A6NM62 1247 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 DCDC2CA8MYV0 355 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 CCDC188H7C350 402 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 UBOX5O94941 541 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 KIF4AO95239 1232 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 CHN1P15882 459 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 ADORA1P30542 326 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 GBP1P32455 592 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 SLC1A4P43007 532 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 MSH2P43246 934 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 MMP13P45452 471 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 COPS2P61201 443 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 PPARDQ03181 441 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 MAP3K12Q12852 859 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 SCARF1Q14162 830 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 NAB2Q15742 525 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 GALNTL6Q49A17 601 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 ARL6IP4Q66PJ3 421 aaKnown RBP7.04□□□□□ -1.28
CCDC6-202ENST00000491922 ARHGAP22Q7Z5H3 698 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 APBB1IPQ7Z5R6 666 aaPredicted RBP7.04□□□□□ -1.28
CCDC6-202ENST00000491922 SDCCAG8Q86SQ7 713 aaPredicted RBP7.04□□□□□ -1.28
CCDC6-202ENST00000491922 ANKLE2Q86XL3 938 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 LRRC34Q8IZ02 419 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 B4GALNT2Q8NHY0 566 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 MDM1Q8TC05 714 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 SCFD2Q8WU76 684 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 TEKT4Q8WW24 435 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 KLHL29Q96CT2 875 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 BICD1Q96G01 975 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 PBKQ96KB5 322 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 ELAC2Q9BQ52 826 aaKnown RBP7.04□□□□□ -1.28
CCDC6-202ENST00000491922 GORASP1Q9BQQ3 440 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 ARHGEF3Q9NR81 526 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 CHCHD3Q9NX63 227 aaKnown RBP7.04□□□□□ -1.28
CCDC6-202ENST00000491922 ADAM22Q9P0K1 906 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 SIK3Q9Y2K2 1263 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 LRRC42Q9Y546 428 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 ASB3Q9Y575 518 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 COL22A1Q8NFW1 1626 aaPredicted RBP7.04□□□□□ -1.28
CCDC6-202ENST00000491922 SCN11AQ9UI33 1791 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 UBR1Q8IWV7 1749 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 RTL9Q8NET4 1388 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 AKAP11Q9UKA4 1901 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 WNT7AO00755 349 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 KLRC4O43908 158 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 HIP1RO75146 1068 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 FTCDO95954 541 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 DSG3P32926 999 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 RBM5P52756 815 aaKnown RBP eCLIP7.04□□□□□ -1.28
CCDC6-202ENST00000491922 GFPT1Q06210 699 aaPredicted RBP7.04□□□□□ -1.28
CCDC6-202ENST00000491922 MTA1Q13330 715 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 TCIRG1Q13488 830 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 CUL3Q13618 768 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 AKNAD1Q5T1N1 836 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 MFSD6Q6ZSS7 791 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 RRAGAQ7L523 313 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 SPATA21Q7Z572 469 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 CROCCP2Q86T23 111 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 ZNF654Q8IZM8 581 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 SPICE1Q8N0Z3 855 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 ACTRT1Q8TDG2 376 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 FBF1Q8TES7 1133 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 PRCCQ92733 491 aaPredicted RBP7.04□□□□□ -1.28
CCDC6-202ENST00000491922 TNFRSF25Q93038 417 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 ZNF594Q96JF6 807 aaPredicted RBP7.04□□□□□ -1.28
CCDC6-202ENST00000491922 NEUROG2Q9H2A3 272 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 DISC1Q9NRI5 854 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 FAM114A2Q9NRY5 505 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 ABCF3Q9NUQ8 709 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 CTNNAL1Q9UBT7 734 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 PNMA2Q9UL42 364 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 ZNF142P52746 1687 aaPredicted RBP7.04□□□□□ -1.28
CCDC6-202ENST00000491922 CAMTA1Q9Y6Y1 1673 aa7.04□□□□□ -1.28
CCDC6-202ENST00000491922 ABCB11O95342 1321 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 PDLIM1O00151 329 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 PRPF3O43395 683 aaKnown RBP7.03□□□□□ -1.28
CCDC6-202ENST00000491922 RNF8O76064 485 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 KRT16P08779 473 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 PDE6BP35913 854 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 PDE6CP51160 858 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 EHHADHQ08426 723 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 BNIP1Q12981 228 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 DYNC1I2Q13409 638 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms