RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 ANAPC4Q9UJX5 808 aa5.86□□□□□ -1.47
RTN4-215ENST00000491592 PCDHA2Q9Y5H9 948 aa5.86□□□□□ -1.47
RTN4-215ENST00000491592 TIMM13Q9Y5L4 95 aaPredicted RBP5.86□□□□□ -1.47
RTN4-215ENST00000491592 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.85□□□□□ -1.47
RTN4-215ENST00000491592 EFCAB14O75071 495 aa5.85□□□□□ -1.47
RTN4-215ENST00000491592 RAPGEF3O95398 923 aa5.85□□□□□ -1.47
RTN4-215ENST00000491592 VIL1P09327 827 aaKnown RBP5.85□□□□□ -1.47
RTN4-215ENST00000491592 FPR2P25090 351 aa5.85□□□□□ -1.47
RTN4-215ENST00000491592 GTF2A2P52657 109 aa5.85□□□□□ -1.47
RTN4-215ENST00000491592 DHX8Q14562 1220 aaKnown RBP5.85□□□□□ -1.47
RTN4-215ENST00000491592 SNX17Q15036 470 aa5.85□□□□□ -1.47
RTN4-215ENST00000491592 KCNMB1Q16558 191 aa5.85□□□□□ -1.47
RTN4-215ENST00000491592 KIZQ2M2Z5 673 aa5.85□□□□□ -1.47
RTN4-215ENST00000491592 GLIPR1L2Q4G1C9 344 aa5.85□□□□□ -1.47
RTN4-215ENST00000491592 FNDC3BQ53EP0 1204 aaKnown RBP5.85□□□□□ -1.47
RTN4-215ENST00000491592 CASC1Q6TDU7 716 aa5.85□□□□□ -1.47
RTN4-215ENST00000491592 LBX2Q6XYB7 198 aa5.85□□□□□ -1.47
RTN4-215ENST00000491592 BRAPQ7Z569 592 aa5.85□□□□□ -1.47
RTN4-215ENST00000491592 KIAA0907Q7Z7F0 614 aaPredicted RBP5.85□□□□□ -1.47
RTN4-215ENST00000491592 IFNL3Q8IZI9 196 aa5.85□□□□□ -1.47
RTN4-215ENST00000491592 Q8N1Y9 231 aa5.85□□□□□ -1.47
RTN4-215ENST00000491592 SLC7A14Q8TBB6 771 aa5.85□□□□□ -1.47
RTN4-215ENST00000491592 DPF3Q92784 378 aa5.85□□□□□ -1.47
RTN4-215ENST00000491592 IL17RAQ96F46 866 aa5.85□□□□□ -1.47
RTN4-215ENST00000491592 PAGR1Q9BTK6 254 aa5.85□□□□□ -1.47
RTN4-215ENST00000491592 TNFRSF12AQ9NP84 129 aa5.85□□□□□ -1.47
RTN4-215ENST00000491592 CRTAC1Q9NQ79 661 aa5.85□□□□□ -1.47
RTN4-215ENST00000491592 PDLIM7Q9NR12 457 aa5.85□□□□□ -1.47
RTN4-215ENST00000491592 YBX2Q9Y2T7 364 aaKnown RBP5.85□□□□□ -1.47
RTN4-215ENST00000491592 GLI1P08151 1106 aa5.84□□□□□ -1.47
RTN4-215ENST00000491592 GRK2P25098 689 aa5.84□□□□□ -1.47
RTN4-215ENST00000491592 GRK3P35626 688 aa5.84□□□□□ -1.47
RTN4-215ENST00000491592 ARL4AP40617 200 aa5.84□□□□□ -1.47
RTN4-215ENST00000491592 BCL6P41182 706 aa5.84□□□□□ -1.47
RTN4-215ENST00000491592 EVA1CP58658 441 aa5.84□□□□□ -1.47
RTN4-215ENST00000491592 CYP4F8P98187 520 aa5.84□□□□□ -1.47
RTN4-215ENST00000491592 VPS72Q15906 364 aa5.84□□□□□ -1.47
RTN4-215ENST00000491592 KRTAP19-4Q3LI73 84 aa5.84□□□□□ -1.47
RTN4-215ENST00000491592 SIRT2Q8IXJ6 389 aa5.84□□□□□ -1.47
RTN4-215ENST00000491592 LZTR1Q8N653 840 aa5.84□□□□□ -1.47
RTN4-215ENST00000491592 PDILTQ8N807 584 aa5.84□□□□□ -1.47
RTN4-215ENST00000491592 NLGN2Q8NFZ4 835 aa5.84□□□□□ -1.47
RTN4-215ENST00000491592 IPO4Q8TEX9 1081 aaKnown RBP5.84□□□□□ -1.47
RTN4-215ENST00000491592 PPM1EQ8WY54 764 aa5.84□□□□□ -1.47
RTN4-215ENST00000491592 INTS4Q96HW7 963 aaKnown RBP5.84□□□□□ -1.47
RTN4-215ENST00000491592 ALG1Q9BT22 464 aa5.84□□□□□ -1.47
RTN4-215ENST00000491592 TRIM39Q9HCM9 518 aa5.84□□□□□ -1.47
RTN4-215ENST00000491592 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.84□□□□□ -1.471e-9■■■■■ 34.3
RTN4-215ENST00000491592 PPARGC1AQ9UBK2 798 aaKnown RBP5.84□□□□□ -1.47
RTN4-215ENST00000491592 NAP1L2Q9ULW6 460 aaPredicted RBP5.84□□□□□ -1.47
RTN4-215ENST00000491592 CFAP69A5D8W1 941 aa5.83□□□□□ -1.48
RTN4-215ENST00000491592 H7BY64 318 aa5.83□□□□□ -1.48
RTN4-215ENST00000491592 CAND2O75155 1236 aa5.83□□□□□ -1.48
RTN4-215ENST00000491592 RASGRP1O95267 797 aa5.83□□□□□ -1.48
RTN4-215ENST00000491592 FUCA1P04066 466 aa5.83□□□□□ -1.48
RTN4-215ENST00000491592 PNLIPP16233 465 aa5.83□□□□□ -1.48
RTN4-215ENST00000491592 NAT1P18440 290 aa5.83□□□□□ -1.48
RTN4-215ENST00000491592 PABPC4Q13310 644 aaKnown RBP eCLIP5.83□□□□□ -1.483e-7■■■□□ 17.8
RTN4-215ENST00000491592 BRD3Q15059 726 aa5.83□□□□□ -1.48
RTN4-215ENST00000491592 L1TD1Q5T7N2 865 aaKnown RBP5.83□□□□□ -1.48
RTN4-215ENST00000491592 BICRALQ6AI39 1079 aa5.83□□□□□ -1.48
RTN4-215ENST00000491592 CCDC174Q6PII3 467 aa5.83□□□□□ -1.48
RTN4-215ENST00000491592 FERMT3Q86UX7 667 aa5.83□□□□□ -1.48
RTN4-215ENST00000491592 CABP7Q86V35 215 aa5.83□□□□□ -1.48
RTN4-215ENST00000491592 SAMD3Q8N6K7 520 aa5.83□□□□□ -1.48
RTN4-215ENST00000491592 PAF1Q8N7H5 531 aa5.83□□□□□ -1.48
RTN4-215ENST00000491592 BHLHE22Q8NFJ8 381 aaPredicted RBP5.83□□□□□ -1.48
RTN4-215ENST00000491592 TMEM169Q96HH4 297 aa5.83□□□□□ -1.48
RTN4-215ENST00000491592 CHAMP1Q96JM3 812 aa5.83□□□□□ -1.48
RTN4-215ENST00000491592 FAM84AQ96KN4 292 aa5.83□□□□□ -1.48
RTN4-215ENST00000491592 INO80BQ9C086 356 aaPredicted RBP5.83□□□□□ -1.48
RTN4-215ENST00000491592 SLC6A17Q9H1V8 727 aa5.83□□□□□ -1.48
RTN4-215ENST00000491592 CLDND1Q9NY35 253 aa5.83□□□□□ -1.48
RTN4-215ENST00000491592 PLAAQ9Y263 795 aa5.83□□□□□ -1.48
RTN4-215ENST00000491592 FRMD4BQ9Y2L6 1034 aa5.83□□□□□ -1.48
RTN4-215ENST00000491592 UNC13AQ9UPW8 1703 aa5.82□□□□□ -1.48
RTN4-215ENST00000491592 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.82□□□□□ -1.48
RTN4-215ENST00000491592 A0A1W2PQJ5 194 aa5.82□□□□□ -1.48
RTN4-215ENST00000491592 C22orf46C9J442 243 aa5.82□□□□□ -1.48
RTN4-215ENST00000491592 ARVCFO00192 962 aa5.82□□□□□ -1.48
RTN4-215ENST00000491592 SRGAP3O43295 1099 aa5.82□□□□□ -1.48
RTN4-215ENST00000491592 KCNQ2O43526 872 aa5.82□□□□□ -1.48
RTN4-215ENST00000491592 PPP1R11O60927 126 aaPredicted RBP5.82□□□□□ -1.48
RTN4-215ENST00000491592 RFPL3O75679 317 aa5.82□□□□□ -1.48
RTN4-215ENST00000491592 CRTAMO95727 393 aa5.82□□□□□ -1.48
RTN4-215ENST00000491592 LDHAP00338 332 aaKnown RBP5.82□□□□□ -1.48
RTN4-215ENST00000491592 AMPD3Q01432 767 aa5.82□□□□□ -1.48
RTN4-215ENST00000491592 GUCY1A3Q02108 690 aa5.82□□□□□ -1.48
RTN4-215ENST00000491592 LSAMPQ13449 338 aa5.82□□□□□ -1.48
RTN4-215ENST00000491592 ADGRF1Q5T601 910 aa5.82□□□□□ -1.48
RTN4-215ENST00000491592 ICE2Q659A1 982 aa5.82□□□□□ -1.48
RTN4-215ENST00000491592 WWC2Q6AWC2 1192 aa5.82□□□□□ -1.48
RTN4-215ENST00000491592 SPOCD1Q6ZMY3 1216 aa5.82□□□□□ -1.48
RTN4-215ENST00000491592 FGD2Q7Z6J4 655 aa5.82□□□□□ -1.48
RTN4-215ENST00000491592 USP33Q8TEY7 942 aa5.82□□□□□ -1.48
RTN4-215ENST00000491592 CLUHP3Q96NS8 147 aa5.82□□□□□ -1.48
RTN4-215ENST00000491592 ZHX3Q9H4I2 956 aa5.82□□□□□ -1.48
RTN4-215ENST00000491592 FAM53CQ9NYF3 392 aa5.82□□□□□ -1.48
RTN4-215ENST00000491592 MAP3K20Q9NYL2 800 aaKnown RBP5.82□□□□□ -1.48
RTN4-215ENST00000491592 KCNG1Q9UIX4 513 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 513.6 ms