RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 RNPEPQ9H4A4 650 aa9.55□□□□□ -0.88
APP-216ENST00000491395 TUT1Q9H6E5 874 aaKnown RBP9.55□□□□□ -0.88
APP-216ENST00000491395 PSTPIP2Q9H939 334 aa9.55□□□□□ -0.88
APP-216ENST00000491395 SLC12A7Q9Y666 1083 aa9.55□□□□□ -0.88
APP-216ENST00000491395 CDH23Q9H251 3354 aa9.54□□□□□ -0.88
APP-216ENST00000491395 UNC80Q8N2C7 3258 aa9.54□□□□□ -0.88
APP-216ENST00000491395 LCHNA4D1U4 455 aa9.54□□□□□ -0.88
APP-216ENST00000491395 PIK3CDO00329 1044 aa9.54□□□□□ -0.88
APP-216ENST00000491395 TREHO43280 583 aa9.54□□□□□ -0.88
APP-216ENST00000491395 TLL1O43897 1013 aa9.54□□□□□ -0.88
APP-216ENST00000491395 STAM2O75886 525 aa9.54□□□□□ -0.88
APP-216ENST00000491395 PARNO95453 639 aaKnown RBP9.54□□□□□ -0.88
APP-216ENST00000491395 CALM1P0DP23 149 aa9.54□□□□□ -0.88
APP-216ENST00000491395 CALM2P0DP24 149 aa9.54□□□□□ -0.88
APP-216ENST00000491395 CALM3P0DP25 149 aa9.54□□□□□ -0.88
APP-216ENST00000491395 SP4Q02446 784 aa9.54□□□□□ -0.88
APP-216ENST00000491395 PCNX4Q63HM2 1172 aa9.54□□□□□ -0.88
APP-216ENST00000491395 XRRA1Q6P2D8 792 aa9.54□□□□□ -0.88
APP-216ENST00000491395 METTL7BQ6UX53 244 aa9.54□□□□□ -0.88
APP-216ENST00000491395 TMTC3Q6ZXV5 915 aa9.54□□□□□ -0.88
APP-216ENST00000491395 NLRX1Q86UT6 975 aa9.54□□□□□ -0.88
APP-216ENST00000491395 TRIM50Q86XT4 487 aa9.54□□□□□ -0.88
APP-216ENST00000491395 FANCBQ8NB91 859 aa9.54□□□□□ -0.88
APP-216ENST00000491395 SYMPKQ92797 1274 aaKnown RBP9.54□□□□□ -0.88
APP-216ENST00000491395 ATP6V0A1Q93050 837 aa9.54□□□□□ -0.88
APP-216ENST00000491395 ZBED2Q9BTP6 218 aa9.54□□□□□ -0.88
APP-216ENST00000491395 USP26Q9BXU7 913 aa9.54□□□□□ -0.88
APP-216ENST00000491395 SETD4Q9NVD3 440 aa9.54□□□□□ -0.88
APP-216ENST00000491395 THEGQ9P2T0 379 aa9.54□□□□□ -0.88
APP-216ENST00000491395 MTCH2Q9Y6C9 303 aa9.54□□□□□ -0.88
APP-216ENST00000491395 ABHD14A-ACY1A0A1B0GW23 586 aa9.53□□□□□ -0.88
APP-216ENST00000491395 RSPH10B2B2RC85 870 aa9.53□□□□□ -0.88
APP-216ENST00000491395 ATP9AO75110 1047 aa9.53□□□□□ -0.88
APP-216ENST00000491395 LGR5O75473 907 aa9.53□□□□□ -0.88
APP-216ENST00000491395 RSPH10BP0C881 870 aa9.53□□□□□ -0.88
APP-216ENST00000491395 HOXC8P31273 242 aa9.53□□□□□ -0.88
APP-216ENST00000491395 EXOSC10Q01780 885 aaKnown RBP9.53□□□□□ -0.88
APP-216ENST00000491395 IKBKEQ14164 716 aa9.53□□□□□ -0.88
APP-216ENST00000491395 UBE2SQ16763 222 aa9.53□□□□□ -0.88
APP-216ENST00000491395 BMP2KLQ5H9B9 411 aa9.53□□□□□ -0.88
APP-216ENST00000491395 KRT40Q6A162 431 aa9.53□□□□□ -0.88
APP-216ENST00000491395 FAM117BQ6P1L5 589 aa9.53□□□□□ -0.88
APP-216ENST00000491395 MICU3Q86XE3 530 aa9.53□□□□□ -0.88
APP-216ENST00000491395 RASEFQ8IZ41 740 aa9.53□□□□□ -0.88
APP-216ENST00000491395 DBF4BQ8NFT6 615 aa9.53□□□□□ -0.88
APP-216ENST00000491395 ATXN2LQ8WWM7 1075 aaKnown RBP9.53□□□□□ -0.88
APP-216ENST00000491395 TCEANC2Q96MN5 208 aa9.53□□□□□ -0.88
APP-216ENST00000491395 NEK1Q96PY6 1258 aa9.53□□□□□ -0.88
APP-216ENST00000491395 ASB2Q96Q27 587 aa9.53□□□□□ -0.88
APP-216ENST00000491395 SENP7Q9BQF6 1050 aa9.53□□□□□ -0.88
APP-216ENST00000491395 OSBPL7Q9BZF2 842 aa9.53□□□□□ -0.88
APP-216ENST00000491395 PKD2L1Q9P0L9 805 aa9.53□□□□□ -0.88
APP-216ENST00000491395 BRPF3Q9ULD4 1205 aa9.53□□□□□ -0.88
APP-216ENST00000491395 TET1Q8NFU7 2136 aa9.52□□□□□ -0.89
APP-216ENST00000491395 GSTTP1A0A1W2PQM5 241 aa9.52□□□□□ -0.89
APP-216ENST00000491395 GTPBP6O43824 516 aaPredicted RBP9.52□□□□□ -0.89
APP-216ENST00000491395 GJB5O95377 273 aa9.52□□□□□ -0.89
APP-216ENST00000491395 CTSHP09668 335 aa9.52□□□□□ -0.89
APP-216ENST00000491395 KCNA2P16389 499 aa9.52□□□□□ -0.89
APP-216ENST00000491395 ITGB5P18084 799 aa9.52□□□□□ -0.89
APP-216ENST00000491395 POU3F3P20264 500 aaPredicted RBP9.52□□□□□ -0.89
APP-216ENST00000491395 MRPS5P82675 430 aaKnown RBP9.52□□□□□ -0.89
APP-216ENST00000491395 GRB10Q13322 594 aa9.52□□□□□ -0.89
APP-216ENST00000491395 SCN5AQ14524 2016 aa9.52□□□□□ -0.89
APP-216ENST00000491395 SKIV2LQ15477 1246 aaKnown RBP9.52□□□□□ -0.89
APP-216ENST00000491395 ADCK5Q3MIX3 580 aa9.52□□□□□ -0.89
APP-216ENST00000491395 RNF20Q5VTR2 975 aa9.52□□□□□ -0.89
APP-216ENST00000491395 SYNE3Q6ZMZ3 975 aa9.52□□□□□ -0.89
APP-216ENST00000491395 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.52□□□□□ -0.89
APP-216ENST00000491395 CENPQQ7L2Z9 268 aaPredicted RBP9.52□□□□□ -0.89
APP-216ENST00000491395 HEATR3Q7Z4Q2 680 aa9.52□□□□□ -0.89
APP-216ENST00000491395 SGMS1Q86VZ5 419 aa9.52□□□□□ -0.89
APP-216ENST00000491395 PRUNE2Q8WUY3 3088 aa9.52□□□□□ -0.89
APP-216ENST00000491395 RAD9AQ99638 391 aa9.52□□□□□ -0.89
APP-216ENST00000491395 PCDHA6Q9UN73 950 aa9.52□□□□□ -0.89
APP-216ENST00000491395 PCDHA8Q9Y5H6 950 aa9.52□□□□□ -0.89
APP-216ENST00000491395 UBIAD1Q9Y5Z9 338 aa9.52□□□□□ -0.89
APP-216ENST00000491395 SPTBN5Q9NRC6 3674 aaKnown RBP9.52□□□□□ -0.89
APP-216ENST00000491395 SPDYE3A6NKU9 549 aa9.51□□□□□ -0.89
APP-216ENST00000491395 LPXNO60711 386 aa9.51□□□□□ -0.89
APP-216ENST00000491395 EFCAB14O75071 495 aa9.51□□□□□ -0.89
APP-216ENST00000491395 TCF7P36402 384 aaPredicted RBP9.51□□□□□ -0.89
APP-216ENST00000491395 ADAM17P78536 824 aa9.51□□□□□ -0.89
APP-216ENST00000491395 ARHGAP4P98171 946 aa9.51□□□□□ -0.89
APP-216ENST00000491395 TFF2Q03403 129 aa9.51□□□□□ -0.89
APP-216ENST00000491395 FUT2Q10981 343 aa9.51□□□□□ -0.89
APP-216ENST00000491395 WWC2Q6AWC2 1192 aa9.51□□□□□ -0.89
APP-216ENST00000491395 TYW1BQ6NUM6 668 aa9.51□□□□□ -0.89
APP-216ENST00000491395 APOA5Q6Q788 366 aa9.51□□□□□ -0.89
APP-216ENST00000491395 DHX32Q7L7V1 743 aaKnown RBP9.51□□□□□ -0.89
APP-216ENST00000491395 GIMAP8Q8ND71 665 aaPredicted RBP9.51□□□□□ -0.89
APP-216ENST00000491395 GPRASP2Q96D09 838 aa9.51□□□□□ -0.89
APP-216ENST00000491395 TSPYL2Q9H2G4 693 aaPredicted RBP9.51□□□□□ -0.89
APP-216ENST00000491395 CHD7Q9P2D1 2997 aa9.51□□□□□ -0.89
APP-216ENST00000491395 ZNF215Q9UL58 517 aaPredicted RBP9.51□□□□□ -0.89
APP-216ENST00000491395 MTUS1Q9ULD2 1270 aa9.51□□□□□ -0.89
APP-216ENST00000491395 V9GY48 417 aaPredicted RBP9.51□□□□□ -0.89
APP-216ENST00000491395 EMSYQ7Z589 1322 aa9.51□□□□□ -0.89
APP-216ENST00000491395 PRRC2BQ5JSZ5 2229 aaKnown RBP9.51□□□□□ -0.89
APP-216ENST00000491395 LINC01553A4QN01 128 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms