RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-223ENST00000490833 KLRC4O43908 158 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 TACC1O75410 805 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 GYPCP04921 128 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 CYP3A4P08684 503 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 H2AFXP16104 143 aaPredicted RBP7.03□□□□□ -1.28
FN1-223ENST00000490833 CIITAP33076 1130 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 EPS15P42566 896 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 MARSP56192 900 aaKnown RBP7.03□□□□□ -1.28
FN1-223ENST00000490833 STX17P56962 302 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 CHMP4BP1P59074 171 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 SNRPFP62306 86 aaKnown RBP7.03□□□□□ -1.28
FN1-223ENST00000490833 ALCAMQ13740 583 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 TNIP1Q15025 636 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 IL17AQ16552 155 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 CCDC96Q2M329 555 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 ABCB5Q2M3G0 1257 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 SLFN13Q68D06 897 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 APOBEC3HQ6NTF7 200 aaKnown RBP7.03□□□□□ -1.28
FN1-223ENST00000490833 CDC42EP5Q6NZY7 148 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 KIAA1328Q86T90 577 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 VPS36Q86VN1 386 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 FBXO11Q86XK2 927 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 GRAMD1CQ8IYS0 662 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 ZNF507Q8TCN5 953 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 NEK9Q8TD19 979 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 SNX29Q8TEQ0 813 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 LMBR1Q8WVP7 490 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.03□□□□□ -1.28
FN1-223ENST00000490833 PCMTD1Q96MG8 357 aaPredicted RBP7.03□□□□□ -1.28
FN1-223ENST00000490833 MBOAT7Q96N66 472 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 TIPINQ9BVW5 301 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 VPS16Q9H269 839 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 BLZF1Q9H2G9 400 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 JMJD4Q9H9V9 463 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 VAT1LQ9HCJ6 419 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 INTS13Q9NVM9 706 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 BIN2Q9UBW5 565 aaPredicted RBP7.03□□□□□ -1.28
FN1-223ENST00000490833 PLAGL2Q9UPG8 496 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 JRKLQ9Y4A0 524 aa7.03□□□□□ -1.28
FN1-223ENST00000490833 ATP8B3O60423 1300 aa7.02□□□□□ -1.28
FN1-223ENST00000490833 CCDC66A2RUB6 948 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 USP27XA6NNY8 438 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 POTECB2RU33 542 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 TMEM232C9JQI7 657 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 TEX33O43247 280 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 TADA3O75528 432 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 GFPT2O94808 682 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 KRT18P05783 430 aaKnown RBP7.02□□□□□ -1.29
FN1-223ENST00000490833 TCP1P17987 556 aaKnown RBP7.02□□□□□ -1.29
FN1-223ENST00000490833 RPA1P27694 616 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 SHMT1P34896 483 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 CCT6AP40227 531 aaKnown RBP7.02□□□□□ -1.29
FN1-223ENST00000490833 TNNI2P48788 182 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 RBM5P52756 815 aaKnown RBP eCLIP7.02□□□□□ -1.29
FN1-223ENST00000490833 KCNQ4P56696 695 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 SETQ01105 290 aaPredicted RBP7.02□□□□□ -1.29
FN1-223ENST00000490833 ICA1Q05084 483 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 PICALMQ13492 652 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 MYBPC2Q14324 1141 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 ZNF827Q17R98 1081 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 SLC9C1Q4G0N8 1177 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 TMEM119Q4V9L6 283 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 GLE1Q53GS7 698 aaKnown RBP7.02□□□□□ -1.29
FN1-223ENST00000490833 ZNF569Q5MCW4 686 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 HDXQ7Z353 690 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 FRMD5Q7Z6J6 570 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 MCF2L2Q86YR7 1114 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 TRMT44Q8IYL2 757 aaKnown RBP7.02□□□□□ -1.29
FN1-223ENST00000490833 NEK11Q8NG66 645 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 SLC16A10Q8TF71 515 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 CPLX3Q8WVH0 158 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 SHISA4Q96DD7 197 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 IWS1Q96ST2 819 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 POLR3CQ9BUI4 534 aaPredicted RBP7.02□□□□□ -1.29
FN1-223ENST00000490833 PRR14Q9BWN1 585 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 WDR11Q9BZH6 1224 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 NDST4Q9H3R1 872 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 DEF6Q9H4E7 631 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 FBXL5Q9UKA1 691 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 MRPL11Q9Y3B7 192 aaKnown RBP7.02□□□□□ -1.29
FN1-223ENST00000490833 COL4A3BPQ9Y5P4 624 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 SAR1BQ9Y6B6 198 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 ATRNL1Q5VV63 1379 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 NAV1Q8NEY1 1877 aa7.02□□□□□ -1.29
FN1-223ENST00000490833 UBE4BO95155 1302 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 GTPBP10A4D1E9 387 aaKnown RBP7.01□□□□□ -1.29
FN1-223ENST00000490833 WTIPA6NIX2 430 aaPredicted RBP7.01□□□□□ -1.29
FN1-223ENST00000490833 PDXKO00764 312 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 SLC16A3O15427 465 aaKnown RBP7.01□□□□□ -1.29
FN1-223ENST00000490833 DKC1O60832 514 aaKnown RBP eCLIP7.01□□□□□ -1.298e-47■□□□□ 9.3
FN1-223ENST00000490833 TRIM37O94972 964 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 APBA3O96018 575 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 GOLGA8HP0CJ92 632 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 BMP3P12645 472 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 AKR1B1P15121 316 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 RFX1P22670 979 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 ZNF76P36508 570 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 PAFAH1B1P43034 410 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 DDR1Q08345 913 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 CETN1Q12798 172 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms