RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 ARIH2O95376 493 aa22.44■■□□□ 1.18
SHROOM3-209ENST00000490690 C6orf222P0C671 652 aaPredicted RBP22.44■■□□□ 1.18
SHROOM3-209ENST00000490690 ARP10275 920 aa22.44■■□□□ 1.18
SHROOM3-209ENST00000490690 ATP2B1P20020 1258 aa22.44■■□□□ 1.18
SHROOM3-209ENST00000490690 MCM7P33993 719 aa22.44■■□□□ 1.18
SHROOM3-209ENST00000490690 SEMA3FQ13275 785 aa22.44■■□□□ 1.18
SHROOM3-209ENST00000490690 LRCH2Q5VUJ6 765 aa22.44■■□□□ 1.18
SHROOM3-209ENST00000490690 SMAP1Q8IYB5 467 aaPredicted RBP22.44■■□□□ 1.18
SHROOM3-209ENST00000490690 RDM1Q8NG50 284 aa22.44■■□□□ 1.18
SHROOM3-209ENST00000490690 SLC5A5Q92911 643 aa22.44■■□□□ 1.18
SHROOM3-209ENST00000490690 ZFP91Q96JP5 570 aaPredicted RBP22.44■■□□□ 1.18
SHROOM3-209ENST00000490690 SPATA33Q96N06 139 aa22.44■■□□□ 1.18
SHROOM3-209ENST00000490690 CRISPLD2Q9H0B8 497 aa22.44■■□□□ 1.18
SHROOM3-209ENST00000490690 POLR3EQ9NVU0 708 aa22.44■■□□□ 1.18
SHROOM3-209ENST00000490690 SLC9A2Q9UBY0 812 aa22.44■■□□□ 1.18
SHROOM3-209ENST00000490690 SYNRGQ9UMZ2 1314 aa22.44■■□□□ 1.18
SHROOM3-209ENST00000490690 MOXD2PA6NHM9 499 aa22.43■■□□□ 1.18
SHROOM3-209ENST00000490690 A6NJR5 290 aa22.43■■□□□ 1.18
SHROOM3-209ENST00000490690 DNM1LO00429 736 aa22.43■■□□□ 1.18
SHROOM3-209ENST00000490690 PPFIA4O75335 1185 aa22.43■■□□□ 1.18
SHROOM3-209ENST00000490690 CABYRO75952 493 aa22.43■■□□□ 1.18
SHROOM3-209ENST00000490690 FARP2O94887 1054 aaPredicted RBP22.43■■□□□ 1.18
SHROOM3-209ENST00000490690 MYCP01106 439 aaPredicted RBP22.43■■□□□ 1.18
SHROOM3-209ENST00000490690 TFRCP02786 760 aaKnown RBP22.43■■□□□ 1.18
SHROOM3-209ENST00000490690 SFNP31947 248 aa22.43■■□□□ 1.18
SHROOM3-209ENST00000490690 ARHGAP1Q07960 439 aa22.43■■□□□ 1.18
SHROOM3-209ENST00000490690 FSCN1Q16658 493 aaKnown RBP22.43■■□□□ 1.18
SHROOM3-209ENST00000490690 DGKDQ16760 1214 aa22.43■■□□□ 1.18
SHROOM3-209ENST00000490690 TMEM266Q2M3C6 531 aa22.43■■□□□ 1.18
SHROOM3-209ENST00000490690 ZNF746Q6NUN9 644 aaPredicted RBP22.43■■□□□ 1.18
SHROOM3-209ENST00000490690 CYFIP1Q7L576 1253 aa22.43■■□□□ 1.18
SHROOM3-209ENST00000490690 ETNPPLQ8TBG4 499 aa22.43■■□□□ 1.18
SHROOM3-209ENST00000490690 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.43■■□□□ 1.18
SHROOM3-209ENST00000490690 STK24Q9Y6E0 443 aa22.43■■□□□ 1.18
SHROOM3-209ENST00000490690 MYH7BA7E2Y1 1941 aa22.42■■□□□ 1.18
SHROOM3-209ENST00000490690 KIAA1217Q5T5P2 1943 aa22.42■■□□□ 1.18
SHROOM3-209ENST00000490690 SLC37A4O43826 429 aa22.42■■□□□ 1.18
SHROOM3-209ENST00000490690 EDIL3O43854 480 aa22.42■■□□□ 1.18
SHROOM3-209ENST00000490690 ADAMTS4O75173 837 aa22.42■■□□□ 1.18
SHROOM3-209ENST00000490690 OR52Z1P0C646 297 aa22.42■■□□□ 1.18
SHROOM3-209ENST00000490690 PRPHP41219 470 aa22.42■■□□□ 1.18
SHROOM3-209ENST00000490690 JAK3P52333 1124 aa22.42■■□□□ 1.18
SHROOM3-209ENST00000490690 ARL6IP4Q66PJ3 421 aaKnown RBP22.42■■□□□ 1.18
SHROOM3-209ENST00000490690 POTEDQ86YR6 584 aa22.42■■□□□ 1.18
SHROOM3-209ENST00000490690 SEZ6LQ9BYH1 1024 aa22.42■■□□□ 1.18
SHROOM3-209ENST00000490690 CFAP45Q9UL16 551 aa22.42■■□□□ 1.18
SHROOM3-209ENST00000490690 SP2Q02086 613 aa22.41■■□□□ 1.18
SHROOM3-209ENST00000490690 ZNF174Q15697 407 aa22.41■■□□□ 1.18
SHROOM3-209ENST00000490690 GNASQ5JWF2 1037 aa22.41■■□□□ 1.18
SHROOM3-209ENST00000490690 SEPT1Q8WYJ6 367 aa22.41■■□□□ 1.18
SHROOM3-209ENST00000490690 TNPO1Q92973 898 aaKnown RBP22.41■■□□□ 1.18
SHROOM3-209ENST00000490690 KATNAL1Q9BW62 490 aa22.41■■□□□ 1.18
SHROOM3-209ENST00000490690 PCDHA12Q9UN75 941 aa22.41■■□□□ 1.18
SHROOM3-209ENST00000490690 MORC2Q9Y6X9 1032 aaPredicted RBP22.41■■□□□ 1.18
SHROOM3-209ENST00000490690 ELP1O95163 1332 aa22.4■■□□□ 1.18
SHROOM3-209ENST00000490690 WDR64B1ANS9 1081 aa22.4■■□□□ 1.18
SHROOM3-209ENST00000490690 ADCY6O43306 1168 aa22.4■■□□□ 1.18
SHROOM3-209ENST00000490690 ATP9AO75110 1047 aa22.4■■□□□ 1.18
SHROOM3-209ENST00000490690 DDIT3P35638 169 aa22.4■■□□□ 1.18
SHROOM3-209ENST00000490690 TOB1P50616 345 aaPredicted RBP22.4■■□□□ 1.18
SHROOM3-209ENST00000490690 LRRC41Q15345 812 aa22.4■■□□□ 1.18
SHROOM3-209ENST00000490690 MIS18BP1Q6P0N0 1132 aa22.4■■□□□ 1.18
SHROOM3-209ENST00000490690 KLHDC9Q8NEP7 349 aa22.4■■□□□ 1.18
SHROOM3-209ENST00000490690 CHMP5Q9NZZ3 219 aa22.4■■□□□ 1.18
SHROOM3-209ENST00000490690 PKD2L1Q9P0L9 805 aa22.4■■□□□ 1.18
SHROOM3-209ENST00000490690 PCDHB6Q9Y5E3 794 aa22.4■■□□□ 1.18
SHROOM3-209ENST00000490690 HTTP42858 3142 aa22.39■■□□□ 1.17
SHROOM3-209ENST00000490690 DKC1O60832 514 aaKnown RBP eCLIP22.39■■□□□ 1.17
SHROOM3-209ENST00000490690 PSMD10O75832 226 aa22.39■■□□□ 1.17
SHROOM3-209ENST00000490690 PGK1P00558 417 aa22.39■■□□□ 1.17
SHROOM3-209ENST00000490690 MMP3P08254 477 aa22.39■■□□□ 1.17
SHROOM3-209ENST00000490690 HOXD8P13378 290 aaPredicted RBP22.39■■□□□ 1.17
SHROOM3-209ENST00000490690 PTGDRQ13258 359 aa22.39■■□□□ 1.17
SHROOM3-209ENST00000490690 ITGB3BPQ13352 177 aaPredicted RBP22.39■■□□□ 1.17
SHROOM3-209ENST00000490690 PPP2R5CQ13362 524 aa22.39■■□□□ 1.17
SHROOM3-209ENST00000490690 ANO1Q5XXA6 986 aa22.39■■□□□ 1.17
SHROOM3-209ENST00000490690 AFG1LQ8WV93 481 aa22.39■■□□□ 1.17
SHROOM3-209ENST00000490690 COPS5Q92905 334 aa22.39■■□□□ 1.17
SHROOM3-209ENST00000490690 MTMR9Q96QG7 549 aa22.39■■□□□ 1.17
SHROOM3-209ENST00000490690 AZI2Q9H6S1 392 aa22.39■■□□□ 1.17
SHROOM3-209ENST00000490690 ZNF215Q9UL58 517 aaPredicted RBP22.39■■□□□ 1.17
SHROOM3-209ENST00000490690 DHX15O43143 795 aaKnown RBP22.38■■□□□ 1.17
SHROOM3-209ENST00000490690 SLC26A2P50443 739 aa22.38■■□□□ 1.17
SHROOM3-209ENST00000490690 ATP2C1P98194 919 aaPredicted RBP22.38■■□□□ 1.17
SHROOM3-209ENST00000490690 FAM160B1Q5W0V3 765 aa22.38■■□□□ 1.17
SHROOM3-209ENST00000490690 PCDHA10Q9Y5I2 948 aa22.38■■□□□ 1.17
SHROOM3-209ENST00000490690 MYCNP04198 464 aaPredicted RBP22.37■■□□□ 1.17
SHROOM3-209ENST00000490690 PSAPP07602 524 aa22.37■■□□□ 1.17
SHROOM3-209ENST00000490690 ACTR2P61160 394 aa22.37■■□□□ 1.17
SHROOM3-209ENST00000490690 SF3A1Q15459 793 aaKnown RBP22.37■■□□□ 1.17
SHROOM3-209ENST00000490690 HSDL1Q3SXM5 330 aa22.37■■□□□ 1.17
SHROOM3-209ENST00000490690 GJC2Q5T442 439 aaPredicted RBP22.37■■□□□ 1.17
SHROOM3-209ENST00000490690 DTHD1Q6ZMT9 781 aa22.37■■□□□ 1.17
SHROOM3-209ENST00000490690 ERMNQ8TAM6 284 aa22.37■■□□□ 1.17
SHROOM3-209ENST00000490690 NEK9Q8TD19 979 aa22.37■■□□□ 1.17
SHROOM3-209ENST00000490690 HAS1Q92839 578 aa22.37■■□□□ 1.17
SHROOM3-209ENST00000490690 FERMT2Q96AC1 680 aa22.37■■□□□ 1.17
SHROOM3-209ENST00000490690 LENG1Q96BZ8 264 aaPredicted RBP22.37■■□□□ 1.17
SHROOM3-209ENST00000490690 GLT1D1Q96MS3 346 aa22.37■■□□□ 1.17
SHROOM3-209ENST00000490690 GPR20Q99678 358 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms