RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 SART1O43290 800 aaKnown RBP14□□□□□ -0.17
SHOX2-205ENST00000490689 KRT5P13647 590 aa14□□□□□ -0.17
SHOX2-205ENST00000490689 PTGISQ16647 500 aa14□□□□□ -0.17
SHOX2-205ENST00000490689 PRR16Q569H4 304 aa14□□□□□ -0.17
SHOX2-205ENST00000490689 PAPD7Q5XG87 772 aaKnown RBP14□□□□□ -0.17
SHOX2-205ENST00000490689 DNAAF5Q86Y56 855 aa14□□□□□ -0.17
SHOX2-205ENST00000490689 CCDC13Q8IYE1 715 aa14□□□□□ -0.17
SHOX2-205ENST00000490689 USTQ9Y2C2 406 aa14□□□□□ -0.17
SHOX2-205ENST00000490689 NCAPD2Q15021 1401 aa14□□□□□ -0.17
SHOX2-205ENST00000490689 H0Y3Z8 333 aa13.99□□□□□ -0.17
SHOX2-205ENST00000490689 FANCGO15287 622 aa13.99□□□□□ -0.17
SHOX2-205ENST00000490689 MYL1P05976 194 aa13.99□□□□□ -0.17
SHOX2-205ENST00000490689 TRIP13Q15645 432 aaPredicted RBP13.99□□□□□ -0.17
SHOX2-205ENST00000490689 UBE2SQ16763 222 aa13.99□□□□□ -0.17
SHOX2-205ENST00000490689 SUSD4Q5VX71 490 aa13.99□□□□□ -0.17
SHOX2-205ENST00000490689 TAB3Q8N5C8 712 aaPredicted RBP13.99□□□□□ -0.17
SHOX2-205ENST00000490689 TSEN2Q8NCE0 465 aaKnown RBP13.99□□□□□ -0.17
SHOX2-205ENST00000490689 MYCBPAPQ8TBZ2 947 aa13.99□□□□□ -0.17
SHOX2-205ENST00000490689 STMN2Q93045 179 aa13.99□□□□□ -0.17
SHOX2-205ENST00000490689 YIPF3Q9GZM5 350 aa13.99□□□□□ -0.17
SHOX2-205ENST00000490689 ZMYND12Q9H0C1 365 aa13.99□□□□□ -0.17
SHOX2-205ENST00000490689 ABCA9Q8IUA7 1624 aa13.99□□□□□ -0.17
SHOX2-205ENST00000490689 GLI1P08151 1106 aa13.99□□□□□ -0.17
SHOX2-205ENST00000490689 PRDX5P30044 214 aa13.99□□□□□ -0.17
SHOX2-205ENST00000490689 RPS8P62241 208 aaKnown RBP13.99□□□□□ -0.17
SHOX2-205ENST00000490689 SLF2Q8IX21 1173 aa13.99□□□□□ -0.17
SHOX2-205ENST00000490689 SPDL1Q96EA4 605 aa13.99□□□□□ -0.17
SHOX2-205ENST00000490689 LBHD1Q9BQE6 289 aaPredicted RBP13.99□□□□□ -0.17
SHOX2-205ENST00000490689 IQCGQ9H095 443 aaKnown RBP13.99□□□□□ -0.17
SHOX2-205ENST00000490689 EMILIN3Q9NT22 766 aa13.99□□□□□ -0.17
SHOX2-205ENST00000490689 TMEM260Q9NX78 707 aa13.99□□□□□ -0.17
SHOX2-205ENST00000490689 HLA-DOAP06340 250 aa13.99□□□□□ -0.17
SHOX2-205ENST00000490689 KLRC1P26715 233 aa13.99□□□□□ -0.17
SHOX2-205ENST00000490689 CUL1Q13616 776 aa13.99□□□□□ -0.17
SHOX2-205ENST00000490689 TBC1D10BQ4KMP7 808 aaPredicted RBP13.99□□□□□ -0.17
SHOX2-205ENST00000490689 HAUS3Q68CZ6 603 aa13.99□□□□□ -0.17
SHOX2-205ENST00000490689 MMGT1Q8N4V1 131 aa13.99□□□□□ -0.17
SHOX2-205ENST00000490689 PIGBQ92521 554 aa13.99□□□□□ -0.17
SHOX2-205ENST00000490689 FAM153BP0C7A2 387 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 ATP5DP30049 168 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 SLC16A2P36021 539 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 KCNQ4P56696 695 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 DR1Q01658 176 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 MECOMQ03112 1051 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 MUM1Q2TAK8 710 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 FAM153CQ494X1 144 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 C6orf163Q5TEZ5 329 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 TPH2Q8IWU9 490 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 PPFIBP2Q8ND30 876 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 PBKQ96KB5 322 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 MAGEF1Q9HAY2 307 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 SPATS2LQ9NUQ6 558 aaKnown RBP13.98□□□□□ -0.17
SHOX2-205ENST00000490689 CCDC87Q9NVE4 849 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 FAM153AQ9UHL3 310 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 HDAC9Q9UKV0 1011 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 RASGRF2O14827 1237 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 TAF11Q15544 211 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 AP1ARQ63HQ0 302 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 FAM47EQ6ZV65 393 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 MCUR1Q96AQ8 359 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 RIC8AQ9NPQ8 531 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.98□□□□□ -0.17
SHOX2-205ENST00000490689 TPX2Q9ULW0 747 aaKnown RBP13.98□□□□□ -0.17
SHOX2-205ENST00000490689 SMIM22K7EJ46 135 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 LAD1O00515 517 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 THAP12O43422 761 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 TSNAXIP1Q2TAA8 658 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 HHATQ5VTY9 493 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 DNAJC7Q99615 494 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 NT5C3AQ9H0P0 336 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 HOMER2Q9NSB8 354 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 ATP8A2Q9NTI2 1148 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 PTPRUQ92729 1446 aa13.98□□□□□ -0.17
SHOX2-205ENST00000490689 RCCD1A6NED2 376 aa13.97□□□□□ -0.17
SHOX2-205ENST00000490689 DDX39AO00148 427 aaKnown RBP13.97□□□□□ -0.17
SHOX2-205ENST00000490689 TTI1O43156 1089 aa13.97□□□□□ -0.17
SHOX2-205ENST00000490689 ADCY8P40145 1251 aa13.97□□□□□ -0.17
SHOX2-205ENST00000490689 CYP4F22Q6NT55 531 aa13.97□□□□□ -0.17
SHOX2-205ENST00000490689 PPP1R14CQ8TAE6 165 aa13.97□□□□□ -0.17
SHOX2-205ENST00000490689 SEC16BQ96JE7 1060 aa13.97□□□□□ -0.17
SHOX2-205ENST00000490689 LZTS2Q9BRK4 669 aa13.97□□□□□ -0.17
SHOX2-205ENST00000490689 CELF4Q9BZC1 486 aaKnown RBP13.97□□□□□ -0.17
SHOX2-205ENST00000490689 AZI2Q9H6S1 392 aa13.97□□□□□ -0.17
SHOX2-205ENST00000490689 PNMA2Q9UL42 364 aa13.97□□□□□ -0.17
SHOX2-205ENST00000490689 SFI1A8K8P3 1242 aa13.97□□□□□ -0.17
SHOX2-205ENST00000490689 SMIM24O75264 130 aa13.97□□□□□ -0.17
SHOX2-205ENST00000490689 PRPF6O94906 941 aaKnown RBP13.97□□□□□ -0.17
SHOX2-205ENST00000490689 LRRC63Q05C16 580 aa13.97□□□□□ -0.17
SHOX2-205ENST00000490689 ZNF449Q6P9G9 518 aa13.97□□□□□ -0.17
SHOX2-205ENST00000490689 ZNF804AQ7Z570 1209 aa13.97□□□□□ -0.17
SHOX2-205ENST00000490689 BICD1Q96G01 975 aa13.97□□□□□ -0.17
SHOX2-205ENST00000490689 TRIM51Q9BSJ1 452 aa13.97□□□□□ -0.17
SHOX2-205ENST00000490689 PSTPIP2Q9H939 334 aa13.97□□□□□ -0.17
SHOX2-205ENST00000490689 GCNT4Q9P109 453 aa13.97□□□□□ -0.17
SHOX2-205ENST00000490689 PDS5AQ29RF7 1337 aaKnown RBP13.97□□□□□ -0.17
SHOX2-205ENST00000490689 FAM107AO95990 144 aa13.97□□□□□ -0.17
SHOX2-205ENST00000490689 PDHBP11177 359 aa13.97□□□□□ -0.17
SHOX2-205ENST00000490689 SCP2P22307 547 aa13.97□□□□□ -0.17
SHOX2-205ENST00000490689 BIRC3Q13489 604 aa13.97□□□□□ -0.17
SHOX2-205ENST00000490689 PDXDC1Q6P996 788 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms