RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 ADGRE1Q14246 886 aa11.92□□□□□ -0.5
TTC28-207ENST00000490475 HSDL1Q3SXM5 330 aa11.92□□□□□ -0.5
TTC28-207ENST00000490475 METTL7BQ6UX53 244 aa11.92□□□□□ -0.5
TTC28-207ENST00000490475 NFXL1Q6ZNB6 911 aa11.92□□□□□ -0.5
TTC28-207ENST00000490475 NLRX1Q86UT6 975 aa11.92□□□□□ -0.5
TTC28-207ENST00000490475 ZNF654Q8IZM8 581 aa11.92□□□□□ -0.5
TTC28-207ENST00000490475 USP38Q8NB14 1042 aa11.92□□□□□ -0.5
TTC28-207ENST00000490475 TCEANC2Q96MN5 208 aa11.92□□□□□ -0.5
TTC28-207ENST00000490475 TUT1Q9H6E5 874 aaKnown RBP11.92□□□□□ -0.5
TTC28-207ENST00000490475 EHMT1Q9H9B1 1298 aa11.92□□□□□ -0.5
TTC28-207ENST00000490475 LY9Q9HBG7 655 aa11.92□□□□□ -0.5
TTC28-207ENST00000490475 COG5Q9UP83 839 aa11.92□□□□□ -0.5
TTC28-207ENST00000490475 SH2B2O14492 632 aaPredicted RBP11.91□□□□□ -0.5
TTC28-207ENST00000490475 MAFGO15525 162 aa11.91□□□□□ -0.5
TTC28-207ENST00000490475 ZNF286BP0CG31 522 aa11.91□□□□□ -0.5
TTC28-207ENST00000490475 KRT32Q14532 448 aa11.91□□□□□ -0.5
TTC28-207ENST00000490475 PCNX4Q63HM2 1172 aa11.91□□□□□ -0.5
TTC28-207ENST00000490475 SYNE3Q6ZMZ3 975 aa11.91□□□□□ -0.5
TTC28-207ENST00000490475 DHX32Q7L7V1 743 aaKnown RBP11.91□□□□□ -0.5
TTC28-207ENST00000490475 SERINC5Q86VE9 423 aa11.91□□□□□ -0.5
TTC28-207ENST00000490475 DHX38Q92620 1227 aaKnown RBP11.91□□□□□ -0.5
TTC28-207ENST00000490475 TNPO1Q92973 898 aaKnown RBP11.91□□□□□ -0.5
TTC28-207ENST00000490475 ATP6V0A1Q93050 837 aa11.91□□□□□ -0.5
TTC28-207ENST00000490475 CTAGE1Q96RT6 745 aa11.91□□□□□ -0.5
TTC28-207ENST00000490475 RAD9AQ99638 391 aa11.91□□□□□ -0.5
TTC28-207ENST00000490475 MYL10Q9BUA6 226 aa11.91□□□□□ -0.5
TTC28-207ENST00000490475 TRANK1O15050 2925 aa11.91□□□□□ -0.5
TTC28-207ENST00000490475 PRRC2BQ5JSZ5 2229 aaKnown RBP11.91□□□□□ -0.5
TTC28-207ENST00000490475 CHD7Q9P2D1 2997 aa11.91□□□□□ -0.5
TTC28-207ENST00000490475 VCANP13611 3396 aa11.9□□□□□ -0.5
TTC28-207ENST00000490475 RSPH10B2B2RC85 870 aa11.9□□□□□ -0.5
TTC28-207ENST00000490475 SPATA31C2B4DYI2 1134 aa11.9□□□□□ -0.5
TTC28-207ENST00000490475 LGR5O75473 907 aa11.9□□□□□ -0.5
TTC28-207ENST00000490475 GJB5O95377 273 aa11.9□□□□□ -0.5
TTC28-207ENST00000490475 SEC24BO95487 1268 aa11.9□□□□□ -0.5
TTC28-207ENST00000490475 AMHP03971 560 aa11.9□□□□□ -0.5
TTC28-207ENST00000490475 LGALS2P05162 132 aa11.9□□□□□ -0.5
TTC28-207ENST00000490475 RSPH10BP0C881 870 aa11.9□□□□□ -0.5
TTC28-207ENST00000490475 MYOGP15173 224 aa11.9□□□□□ -0.5
TTC28-207ENST00000490475 TAP1Q03518 808 aa11.9□□□□□ -0.5
TTC28-207ENST00000490475 CCDC85BQ15834 202 aaPredicted RBP11.9□□□□□ -0.5
TTC28-207ENST00000490475 RAB11FIP4Q86YS3 637 aa11.9□□□□□ -0.5
TTC28-207ENST00000490475 GPRASP2Q96D09 838 aa11.9□□□□□ -0.5
TTC28-207ENST00000490475 JAKMIP1Q96N16 626 aaKnown RBP11.9□□□□□ -0.5
TTC28-207ENST00000490475 C16orf70Q9BSU1 422 aa11.9□□□□□ -0.5
TTC28-207ENST00000490475 PRDM6Q9NQX0 595 aa11.9□□□□□ -0.5
TTC28-207ENST00000490475 INSL6Q9Y581 213 aa11.9□□□□□ -0.5
TTC28-207ENST00000490475 SLC12A7Q9Y666 1083 aa11.9□□□□□ -0.5
TTC28-207ENST00000490475 NBNO60934 754 aa11.89□□□□□ -0.51
TTC28-207ENST00000490475 HOXC8P31273 242 aa11.89□□□□□ -0.51
TTC28-207ENST00000490475 THPOP40225 353 aa11.89□□□□□ -0.51
TTC28-207ENST00000490475 SP2Q02086 613 aa11.89□□□□□ -0.51
TTC28-207ENST00000490475 SKIV2LQ15477 1246 aaKnown RBP11.89□□□□□ -0.51
TTC28-207ENST00000490475 SLC35G1Q2M3R5 365 aa11.89□□□□□ -0.51
TTC28-207ENST00000490475 TRIM71Q2Q1W2 868 aaKnown RBP11.89□□□□□ -0.51
TTC28-207ENST00000490475 ZNF618Q5T7W0 954 aa11.89□□□□□ -0.51
TTC28-207ENST00000490475 FAM43BQ6ZT52 329 aaPredicted RBP11.89□□□□□ -0.51
TTC28-207ENST00000490475 IL31RAQ8NI17 732 aa11.89□□□□□ -0.51
TTC28-207ENST00000490475 ARNTL2Q8WYA1 636 aa11.89□□□□□ -0.51
TTC28-207ENST00000490475 APBB2Q92870 758 aa11.89□□□□□ -0.51
TTC28-207ENST00000490475 SAMD11Q96NU1 681 aa11.89□□□□□ -0.51
TTC28-207ENST00000490475 TGS1Q96RS0 853 aaKnown RBP11.89□□□□□ -0.51
TTC28-207ENST00000490475 GLT8D2Q9H1C3 349 aa11.89□□□□□ -0.51
TTC28-207ENST00000490475 PSTPIP2Q9H939 334 aa11.89□□□□□ -0.51
TTC28-207ENST00000490475 RBM19Q9Y4C8 960 aaKnown RBP11.89□□□□□ -0.51
TTC28-207ENST00000490475 MTCH2Q9Y6C9 303 aa11.89□□□□□ -0.51
TTC28-207ENST00000490475 NRCAMQ92823 1304 aa11.88□□□□□ -0.51
TTC28-207ENST00000490475 SPDYE3A6NKU9 549 aa11.88□□□□□ -0.51
TTC28-207ENST00000490475 hCG_1984214I3L0E3 225 aa11.88□□□□□ -0.51
TTC28-207ENST00000490475 EPB41L2O43491 1005 aaKnown RBP11.88□□□□□ -0.51
TTC28-207ENST00000490475 HMGB1P09429 215 aaKnown RBP11.88□□□□□ -0.51
TTC28-207ENST00000490475 SMIM10L2AP0DMW4 78 aa11.88□□□□□ -0.51
TTC28-207ENST00000490475 SMIM10L2BP0DMW5 78 aa11.88□□□□□ -0.51
TTC28-207ENST00000490475 RXRAP19793 462 aa11.88□□□□□ -0.51
TTC28-207ENST00000490475 MRPS9P82933 396 aaKnown RBP11.88□□□□□ -0.51
TTC28-207ENST00000490475 TAF2Q6P1X5 1199 aa11.88□□□□□ -0.51
TTC28-207ENST00000490475 CYFIP1Q7L576 1253 aa11.88□□□□□ -0.51
TTC28-207ENST00000490475 RSPH3Q86UC2 560 aa11.88□□□□□ -0.51
TTC28-207ENST00000490475 SGMS1Q86VZ5 419 aa11.88□□□□□ -0.51
TTC28-207ENST00000490475 MICALL1Q8N3F8 863 aa11.88□□□□□ -0.51
TTC28-207ENST00000490475 ZNF713Q8N859 430 aaPredicted RBP11.88□□□□□ -0.51
TTC28-207ENST00000490475 ADAMTS19Q8TE59 1207 aa11.88□□□□□ -0.51
TTC28-207ENST00000490475 PPP1R13LQ8WUF5 828 aa11.88□□□□□ -0.51
TTC28-207ENST00000490475 SEPT8Q92599 483 aa11.88□□□□□ -0.51
TTC28-207ENST00000490475 UHRF1Q96T88 793 aaPredicted RBP11.88□□□□□ -0.51
TTC28-207ENST00000490475 GPR20Q99678 358 aa11.88□□□□□ -0.51
TTC28-207ENST00000490475 RBM28Q9NW13 759 aaKnown RBP11.88□□□□□ -0.51
TTC28-207ENST00000490475 BRPF3Q9ULD4 1205 aa11.88□□□□□ -0.51
TTC28-207ENST00000490475 MICAL3Q7RTP6 2002 aa11.87□□□□□ -0.51
TTC28-207ENST00000490475 MEIS2O14770 477 aa11.87□□□□□ -0.51
TTC28-207ENST00000490475 PSMA5P28066 241 aa11.87□□□□□ -0.51
TTC28-207ENST00000490475 ERVK-21P61565 698 aa11.87□□□□□ -0.51
TTC28-207ENST00000490475 GPNMBQ14956 572 aa11.87□□□□□ -0.51
TTC28-207ENST00000490475 PLEKHG4Q58EX7 1191 aa11.87□□□□□ -0.51
TTC28-207ENST00000490475 BLOC1S2Q6QNY1 142 aa11.87□□□□□ -0.51
TTC28-207ENST00000490475 Q6ZUG5 572 aa11.87□□□□□ -0.51
TTC28-207ENST00000490475 RPAINQ86UA6 219 aa11.87□□□□□ -0.51
TTC28-207ENST00000490475 CMTR1Q8N1G2 835 aaKnown RBP11.87□□□□□ -0.51
TTC28-207ENST00000490475 FANCBQ8NB91 859 aa11.87□□□□□ -0.51
TTC28-207ENST00000490475 PIBF1Q8WXW3 757 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms