RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-215	ENST00000490140	KIF5B	P33176	963 aa		13.61	□□□□□ -0.23
FDPS-215	ENST00000490140	HTRA4	P83105	476 aa	Predicted RBP	13.61	□□□□□ -0.23
FDPS-215	ENST00000490140	WTAP	Q15007	396 aa		13.61	□□□□□ -0.23
FDPS-215	ENST00000490140	PLEKHG4	Q58EX7	1191 aa		13.61	□□□□□ -0.23
FDPS-215	ENST00000490140	TMCO2	Q7Z6W1	182 aa	Predicted RBP	13.61	□□□□□ -0.23
FDPS-215	ENST00000490140	FCHSD1	Q86WN1	690 aa		13.61	□□□□□ -0.23
FDPS-215	ENST00000490140	DBF4B	Q8NFT6	615 aa		13.61	□□□□□ -0.23
FDPS-215	ENST00000490140	MRPL38	Q96DV4	380 aa	Known RBP	13.61	□□□□□ -0.23
FDPS-215	ENST00000490140	C16orf70	Q9BSU1	422 aa		13.61	□□□□□ -0.23
FDPS-215	ENST00000490140	RIOX1	Q9H6W3	641 aa		13.61	□□□□□ -0.23
FDPS-215	ENST00000490140	SEC63	Q9UGP8	760 aa	Known RBP	13.61	□□□□□ -0.23
FDPS-215	ENST00000490140	RWDD3	Q9Y3V2	267 aa		13.61	□□□□□ -0.23
FDPS-215	ENST00000490140	HOXC8	P31273	242 aa		13.6	□□□□□ -0.23
FDPS-215	ENST00000490140	ICAM3	P32942	547 aa		13.6	□□□□□ -0.23
FDPS-215	ENST00000490140	MBTPS1	Q14703	1052 aa		13.6	□□□□□ -0.23
FDPS-215	ENST00000490140	LEXM	Q3ZCV2	418 aa		13.6	□□□□□ -0.23
FDPS-215	ENST00000490140	TRAF7	Q6Q0C0	670 aa		13.6	□□□□□ -0.23
FDPS-215	ENST00000490140	RSPH3	Q86UC2	560 aa		13.6	□□□□□ -0.23
FDPS-215	ENST00000490140	NCOA7	Q8NI08	942 aa		13.6	□□□□□ -0.23
FDPS-215	ENST00000490140	SP7	Q8TDD2	431 aa	Predicted RBP	13.6	□□□□□ -0.23
FDPS-215	ENST00000490140	CDHR1	Q96JP9	859 aa		13.6	□□□□□ -0.23
FDPS-215	ENST00000490140	INPP4A	Q96PE3	977 aa	Predicted RBP	13.6	□□□□□ -0.23
FDPS-215	ENST00000490140	PIGS	Q96S52	555 aa		13.6	□□□□□ -0.23
FDPS-215	ENST00000490140	FRMPD4	Q14CM0	1322 aa		13.6	□□□□□ -0.23
FDPS-215	ENST00000490140	PIEZO1	Q92508	2521 aa		13.59	□□□□□ -0.23
FDPS-215	ENST00000490140	NCK2	O43639	380 aa		13.59	□□□□□ -0.23
FDPS-215	ENST00000490140	GPR37L1	O60883	481 aa		13.59	□□□□□ -0.23
FDPS-215	ENST00000490140	PPP1R11	O60927	126 aa	Predicted RBP	13.59	□□□□□ -0.23
FDPS-215	ENST00000490140	KCNA5	P22460	613 aa		13.59	□□□□□ -0.23
FDPS-215	ENST00000490140	SSTR3	P32745	418 aa	Predicted RBP	13.59	□□□□□ -0.23
FDPS-215	ENST00000490140	ZNF200	P98182	395 aa	Predicted RBP	13.59	□□□□□ -0.23
FDPS-215	ENST00000490140	TAF2	Q6P1X5	1199 aa		13.59	□□□□□ -0.23
FDPS-215	ENST00000490140	SPRED2	Q7Z698	418 aa		13.59	□□□□□ -0.23
FDPS-215	ENST00000490140	NLRX1	Q86UT6	975 aa		13.59	□□□□□ -0.23
FDPS-215	ENST00000490140	IL31RA	Q8NI17	732 aa		13.59	□□□□□ -0.23
FDPS-215	ENST00000490140	CTCFL	Q8NI51	663 aa	Predicted RBP	13.59	□□□□□ -0.23
FDPS-215	ENST00000490140	SMARCC2	Q8TAQ2	1214 aa		13.59	□□□□□ -0.23
FDPS-215	ENST00000490140	RRP36	Q96EU6	259 aa	Known RBP	13.59	□□□□□ -0.23
FDPS-215	ENST00000490140	SENP7	Q9BQF6	1050 aa		13.59	□□□□□ -0.23
FDPS-215	ENST00000490140	LRFN3	Q9BTN0	628 aa		13.59	□□□□□ -0.23
FDPS-215	ENST00000490140	IFIH1	Q9BYX4	1025 aa	Known RBP	13.59	□□□□□ -0.23
FDPS-215	ENST00000490140	KAT6A	Q92794	2004 aa		13.59	□□□□□ -0.23
FDPS-215	ENST00000490140	NRCAM	Q92823	1304 aa		13.59	□□□□□ -0.23
FDPS-215	ENST00000490140	RALGAPA2	Q2PPJ7	1873 aa		13.59	□□□□□ -0.23
FDPS-215	ENST00000490140	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.58	□□□□□ -0.24
FDPS-215	ENST00000490140	SPATA31C2	B4DYI2	1134 aa		13.58	□□□□□ -0.24
FDPS-215	ENST00000490140	SORBS3	O60504	671 aa		13.58	□□□□□ -0.24
FDPS-215	ENST00000490140	CTSH	P09668	335 aa		13.58	□□□□□ -0.24
FDPS-215	ENST00000490140	ALAD	P13716	330 aa		13.58	□□□□□ -0.24
FDPS-215	ENST00000490140	SP2	Q02086	613 aa		13.58	□□□□□ -0.24
FDPS-215	ENST00000490140	EPC2	Q52LR7	807 aa		13.58	□□□□□ -0.24
FDPS-215	ENST00000490140	PCNX4	Q63HM2	1172 aa		13.58	□□□□□ -0.24
FDPS-215	ENST00000490140	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	13.58	□□□□□ -0.24	3e-10	■■■■□ 21.1
FDPS-215	ENST00000490140	CYB5R4	Q7L1T6	521 aa		13.58	□□□□□ -0.24
FDPS-215	ENST00000490140	CYFIP1	Q7L576	1253 aa		13.58	□□□□□ -0.24
FDPS-215	ENST00000490140	GJD3	Q8N144	294 aa		13.58	□□□□□ -0.24
FDPS-215	ENST00000490140	WNT8B	Q93098	351 aa		13.58	□□□□□ -0.24
FDPS-215	ENST00000490140	TOP1MT	Q969P6	601 aa		13.58	□□□□□ -0.24
FDPS-215	ENST00000490140	MAP3K14	Q99558	947 aa		13.58	□□□□□ -0.24
FDPS-215	ENST00000490140	LZTS2	Q9BRK4	669 aa		13.58	□□□□□ -0.24
FDPS-215	ENST00000490140	C17orf80	Q9BSJ5	609 aa		13.58	□□□□□ -0.24
FDPS-215	ENST00000490140	RAPGEFL1	Q9UHV5	662 aa		13.58	□□□□□ -0.24
FDPS-215	ENST00000490140	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.58	□□□□□ -0.24
FDPS-215	ENST00000490140		H3BNC9	293 aa		13.57	□□□□□ -0.24
FDPS-215	ENST00000490140	TREH	O43280	583 aa		13.57	□□□□□ -0.24
FDPS-215	ENST00000490140	DDAH1	O94760	285 aa		13.57	□□□□□ -0.24
FDPS-215	ENST00000490140	GNAQ	P50148	359 aa		13.57	□□□□□ -0.24
FDPS-215	ENST00000490140	ARHGAP4	P98171	946 aa		13.57	□□□□□ -0.24
FDPS-215	ENST00000490140	TROAP	Q12815	778 aa		13.57	□□□□□ -0.24
FDPS-215	ENST00000490140	MKRN4P	Q13434	485 aa	Predicted RBP	13.57	□□□□□ -0.24
FDPS-215	ENST00000490140	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.57	□□□□□ -0.24
FDPS-215	ENST00000490140	BANK1	Q8NDB2	785 aa		13.57	□□□□□ -0.24
FDPS-215	ENST00000490140	TNPO1	Q92973	898 aa	Known RBP	13.57	□□□□□ -0.24
FDPS-215	ENST00000490140	GPR20	Q99678	358 aa		13.57	□□□□□ -0.24
FDPS-215	ENST00000490140	C11orf84	Q9BUA3	381 aa	Predicted RBP	13.57	□□□□□ -0.24
FDPS-215	ENST00000490140	SPZ1	Q9BXG8	430 aa		13.57	□□□□□ -0.24
FDPS-215	ENST00000490140	RNPEP	Q9H4A4	650 aa		13.57	□□□□□ -0.24
FDPS-215	ENST00000490140	NSUN3	Q9H649	340 aa	Known RBP	13.57	□□□□□ -0.24
FDPS-215	ENST00000490140	EPHX3	Q9H6B9	360 aa		13.57	□□□□□ -0.24
FDPS-215	ENST00000490140	NLRC5	Q86WI3	1866 aa		13.57	□□□□□ -0.24
FDPS-215	ENST00000490140	PI4K2B	G5E9Z4	385 aa		13.56	□□□□□ -0.24
FDPS-215	ENST00000490140	PIK3CD	O00329	1044 aa		13.56	□□□□□ -0.24
FDPS-215	ENST00000490140	UPP2	O95045	317 aa		13.56	□□□□□ -0.24
FDPS-215	ENST00000490140	IGHD	P01880	384 aa		13.56	□□□□□ -0.24
FDPS-215	ENST00000490140	SMARCA1	P28370	1054 aa		13.56	□□□□□ -0.24
FDPS-215	ENST00000490140	GPM6B	Q13491	265 aa		13.56	□□□□□ -0.24
FDPS-215	ENST00000490140	CSPP1	Q1MSJ5	1256 aa		13.56	□□□□□ -0.24
FDPS-215	ENST00000490140	TCTN1	Q2MV58	587 aa		13.56	□□□□□ -0.24
FDPS-215	ENST00000490140	TTC22	Q5TAA0	569 aa		13.56	□□□□□ -0.24
FDPS-215	ENST00000490140	CASC1	Q6TDU7	716 aa		13.56	□□□□□ -0.24
FDPS-215	ENST00000490140	RPAIN	Q86UA6	219 aa		13.56	□□□□□ -0.24
FDPS-215	ENST00000490140	FAM178B	Q8IXR5	827 aa		13.56	□□□□□ -0.24
FDPS-215	ENST00000490140	TMEM192	Q8IY95	271 aa		13.56	□□□□□ -0.24
FDPS-215	ENST00000490140	FIBCD1	Q8N539	461 aa		13.56	□□□□□ -0.24
FDPS-215	ENST00000490140	PPP2R3C	Q969Q6	453 aa		13.56	□□□□□ -0.24
FDPS-215	ENST00000490140	GPRASP2	Q96D09	838 aa		13.56	□□□□□ -0.24
FDPS-215	ENST00000490140	IL17RA	Q96F46	866 aa		13.56	□□□□□ -0.24
FDPS-215	ENST00000490140	MTA3	Q9BTC8	594 aa		13.56	□□□□□ -0.24
FDPS-215	ENST00000490140	LMAN2L	Q9H0V9	348 aa		13.56	□□□□□ -0.24
FDPS-215	ENST00000490140	EHMT1	Q9H9B1	1298 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms