RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 AGXT2Q9BYV1 514 aa11.2□□□□□ -0.62
TMEM39A-210ENST00000490099 SEC63Q9UGP8 760 aaKnown RBP11.2□□□□□ -0.62
TMEM39A-210ENST00000490099 YBX2Q9Y2T7 364 aaKnown RBP11.2□□□□□ -0.62
TMEM39A-210ENST00000490099 PCDHA11Q9Y5I1 949 aa11.2□□□□□ -0.62
TMEM39A-210ENST00000490099 SLC4A7Q9Y6M7 1214 aa11.2□□□□□ -0.62
TMEM39A-210ENST00000490099 TRIP12Q14669 1992 aaPredicted RBP11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 MYH7BA7E2Y1 1941 aa11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 H3BRB1 525 aa11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 RIOK3O14730 519 aaKnown RBP11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 GALR2O43603 387 aaPredicted RBP11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 HMGB1P09429 215 aaKnown RBP11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 ZNF286BP0CG31 522 aa11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 CKBP12277 381 aa11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 SELPP16109 830 aa11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 ITGB5P18084 799 aa11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 HSPA4P34932 840 aa11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 ADAM17P78536 824 aa11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 TYW1BQ6NUM6 668 aa11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 SERINC5Q86VE9 423 aa11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 C7orf31Q8N865 590 aa11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 MAFAQ8NHW3 353 aaPredicted RBP11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 SMARCC2Q8TAQ2 1214 aa11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 CUL5Q93034 780 aa11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 WNT8BQ93098 351 aa11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 GPRASP2Q96D09 838 aa11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 GPR20Q99678 358 aa11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 USP26Q9BXU7 913 aa11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 TUT1Q9H6E5 874 aaKnown RBP11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 MLXIPQ9HAP2 919 aa11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 RBM28Q9NW13 759 aaKnown RBP11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 RTEL1Q9NZ71 1219 aa11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 MSRAQ9UJ68 235 aa11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 PCDHB8Q9UN66 801 aa11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 TELO2Q9Y4R8 837 aa11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 UBIAD1Q9Y5Z9 338 aa11.19□□□□□ -0.62
TMEM39A-210ENST00000490099 SCN5AQ14524 2016 aa11.18□□□□□ -0.62
TMEM39A-210ENST00000490099 CNTNAP5Q8WYK1 1306 aa11.18□□□□□ -0.62
TMEM39A-210ENST00000490099 hCG_1642624A0A1W2PR95 340 aa11.18□□□□□ -0.62
TMEM39A-210ENST00000490099 MAFGO15525 162 aa11.18□□□□□ -0.62
TMEM39A-210ENST00000490099 ZBTB43O43298 467 aa11.18□□□□□ -0.62
TMEM39A-210ENST00000490099 EPB41L2O43491 1005 aaKnown RBP11.18□□□□□ -0.62
TMEM39A-210ENST00000490099 NBNO60934 754 aa11.18□□□□□ -0.62
TMEM39A-210ENST00000490099 BAIAP3O94812 1187 aa11.18□□□□□ -0.62
TMEM39A-210ENST00000490099 LGALS2P05162 132 aa11.18□□□□□ -0.62
TMEM39A-210ENST00000490099 KCNA2P16389 499 aa11.18□□□□□ -0.62
TMEM39A-210ENST00000490099 ATP2A2P16615 1042 aaKnown RBP11.18□□□□□ -0.62
TMEM39A-210ENST00000490099 EVCP57679 992 aa11.18□□□□□ -0.62
TMEM39A-210ENST00000490099 ZNF200P98182 395 aaPredicted RBP11.18□□□□□ -0.62
TMEM39A-210ENST00000490099 MBTPS1Q14703 1052 aa11.18□□□□□ -0.62
TMEM39A-210ENST00000490099 LRRC8DQ7L1W4 858 aa11.18□□□□□ -0.62
TMEM39A-210ENST00000490099 DEFB128Q7Z7B8 93 aa11.18□□□□□ -0.62
TMEM39A-210ENST00000490099 MICU3Q86XE3 530 aa11.18□□□□□ -0.62
TMEM39A-210ENST00000490099 CCDC155Q8N6L0 562 aa11.18□□□□□ -0.62
TMEM39A-210ENST00000490099 GIMAP8Q8ND71 665 aaPredicted RBP11.18□□□□□ -0.62
TMEM39A-210ENST00000490099 NOD1Q9Y239 953 aa11.18□□□□□ -0.62
TMEM39A-210ENST00000490099 ATP9AO75110 1047 aa11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 ACTN1P12814 892 aa11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 FOSL2P15408 326 aa11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 POU3F3P20264 500 aaPredicted RBP11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 CDC27P30260 824 aa11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 RABGGTBP53611 331 aa11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 ADGRE1Q14246 886 aa11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 RTN1Q16799 776 aa11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 ERICH6BQ5W0A0 696 aa11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 WWC2Q6AWC2 1192 aa11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 SYNE3Q6ZMZ3 975 aa11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 CYFIP1Q7L576 1253 aa11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 NLRX1Q86UT6 975 aa11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 RAB11FIP4Q86YS3 637 aa11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 CCDC82Q8N4S0 544 aa11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 CCDC136Q96JN2 1154 aa11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 CDHR1Q96JP9 859 aa11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 TCEANC2Q96MN5 208 aa11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 SLC9A7Q96T83 725 aa11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 ALG1Q9BT22 464 aa11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 NKX2-4Q9H2Z4 354 aa11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 RNPEPQ9H4A4 650 aa11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 RIC8AQ9NPQ8 531 aa11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 JADE2Q9NQC1 790 aa11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 PCDHA6Q9UN73 950 aa11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 PCDHA8Q9Y5H6 950 aa11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 SNX14Q9Y5W7 946 aa11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 V9GY48 417 aaPredicted RBP11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 TTC28Q96AY4 2481 aa11.17□□□□□ -0.62
TMEM39A-210ENST00000490099 NID2Q14112 1375 aa11.16□□□□□ -0.62
TMEM39A-210ENST00000490099 ABHD14A-ACY1A0A1B0GW23 586 aa11.16□□□□□ -0.62
TMEM39A-210ENST00000490099 GSTTP1A0A1W2PQM5 241 aa11.16□□□□□ -0.62
TMEM39A-210ENST00000490099 hCG_1984214I3L0E3 225 aa11.16□□□□□ -0.62
TMEM39A-210ENST00000490099 STXBP3O00186 592 aa11.16□□□□□ -0.62
TMEM39A-210ENST00000490099 DLL1O00548 723 aa11.16□□□□□ -0.62
TMEM39A-210ENST00000490099 CAND2O75155 1236 aa11.16□□□□□ -0.62
TMEM39A-210ENST00000490099 FOSP01100 380 aaPredicted RBP11.16□□□□□ -0.62
TMEM39A-210ENST00000490099 SMIM10L2AP0DMW4 78 aa11.16□□□□□ -0.62
TMEM39A-210ENST00000490099 SMIM10L2BP0DMW5 78 aa11.16□□□□□ -0.62
TMEM39A-210ENST00000490099 MYOGP15173 224 aa11.16□□□□□ -0.62
TMEM39A-210ENST00000490099 CLK2P49760 499 aaKnown RBP11.16□□□□□ -0.62
TMEM39A-210ENST00000490099 CHMP4BP1P59074 171 aa11.16□□□□□ -0.62
TMEM39A-210ENST00000490099 TCTN1Q2MV58 587 aa11.16□□□□□ -0.62
TMEM39A-210ENST00000490099 ZNF618Q5T7W0 954 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms