RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 RAPGEF1Q13905 1077 aa17.38■□□□□ 0.37
BRD9-208ENST00000489816 SH3BP5LQ7L8J4 393 aa17.38■□□□□ 0.37
BRD9-208ENST00000489816 TBC1D5Q92609 795 aa17.38■□□□□ 0.37
BRD9-208ENST00000489816 CDK5RAP2Q96SN8 1893 aa17.38■□□□□ 0.37
BRD9-208ENST00000489816 F5H6K3 240 aa17.38■□□□□ 0.37
BRD9-208ENST00000489816 KLRC3Q07444 240 aa17.38■□□□□ 0.37
BRD9-208ENST00000489816 KCNA1Q09470 495 aa17.38■□□□□ 0.37
BRD9-208ENST00000489816 PDIA5Q14554 519 aa17.38■□□□□ 0.37
BRD9-208ENST00000489816 RGL1Q9NZL6 768 aa17.38■□□□□ 0.37
BRD9-208ENST00000489816 MAST2Q6P0Q8 1798 aa17.38■□□□□ 0.37
BRD9-208ENST00000489816 PRPF6O94906 941 aaKnown RBP17.38■□□□□ 0.37
BRD9-208ENST00000489816 ICA1Q05084 483 aa17.38■□□□□ 0.37
BRD9-208ENST00000489816 TCERG1LQ5VWI1 586 aa17.38■□□□□ 0.37
BRD9-208ENST00000489816 MTMR8Q96EF0 704 aa17.38■□□□□ 0.37
BRD9-208ENST00000489816 RABEP2Q9H5N1 569 aa17.38■□□□□ 0.37
BRD9-208ENST00000489816 ADAMTS1Q9UHI8 967 aa17.38■□□□□ 0.37
BRD9-208ENST00000489816 SMARCA1P28370 1054 aa17.37■□□□□ 0.37
BRD9-208ENST00000489816 NOVP48745 357 aa17.37■□□□□ 0.37
BRD9-208ENST00000489816 USP14P54578 494 aa17.37■□□□□ 0.37
BRD9-208ENST00000489816 ADAM9Q13443 819 aa17.37■□□□□ 0.37
BRD9-208ENST00000489816 GPATCH4Q5T3I0 446 aaKnown RBP17.37■□□□□ 0.37
BRD9-208ENST00000489816 SIAH1Q8IUQ4 282 aa17.37■□□□□ 0.37
BRD9-208ENST00000489816 FAM133AQ8N9E0 248 aa17.37■□□□□ 0.37
BRD9-208ENST00000489816 RETREG2Q8NC44 543 aa17.37■□□□□ 0.37
BRD9-208ENST00000489816 PROCA1Q8NCQ7 364 aaPredicted RBP17.37■□□□□ 0.37
BRD9-208ENST00000489816 PIGOQ8TEQ8 1089 aa17.37■□□□□ 0.37
BRD9-208ENST00000489816 UBXN6Q9BZV1 441 aa17.37■□□□□ 0.37
BRD9-208ENST00000489816 DMGDHQ9UI17 866 aaKnown RBP17.37■□□□□ 0.37
BRD9-208ENST00000489816 COL4A3BPQ9Y5P4 624 aa17.37■□□□□ 0.37
BRD9-208ENST00000489816 CLIC2O15247 247 aa17.37■□□□□ 0.37
BRD9-208ENST00000489816 USO1O60763 962 aaKnown RBP17.37■□□□□ 0.37
BRD9-208ENST00000489816 FTCDO95954 541 aa17.37■□□□□ 0.37
BRD9-208ENST00000489816 GH2P01242 217 aa17.37■□□□□ 0.37
BRD9-208ENST00000489816 EPS15P42566 896 aa17.37■□□□□ 0.37
BRD9-208ENST00000489816 FKBP3Q00688 224 aaKnown RBP17.37■□□□□ 0.37
BRD9-208ENST00000489816 TMEM119Q4V9L6 283 aa17.37■□□□□ 0.37
BRD9-208ENST00000489816 CATSPER3Q86XQ3 398 aa17.37■□□□□ 0.37
BRD9-208ENST00000489816 KSR1Q8IVT5 923 aa17.37■□□□□ 0.37
BRD9-208ENST00000489816 CCDC170Q8IYT3 715 aa17.37■□□□□ 0.37
BRD9-208ENST00000489816 SCFD1Q8WVM8 642 aa17.37■□□□□ 0.37
BRD9-208ENST00000489816 LRRC1Q9BTT6 524 aa17.37■□□□□ 0.37
BRD9-208ENST00000489816 EMILIN3Q9NT22 766 aa17.37■□□□□ 0.37
BRD9-208ENST00000489816 FAM198AQ9UFP1 575 aa17.37■□□□□ 0.37
BRD9-208ENST00000489816 BCS1LQ9Y276 419 aa17.37■□□□□ 0.37
BRD9-208ENST00000489816 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.37■□□□□ 0.37
BRD9-208ENST00000489816 CLK2P49760 499 aaKnown RBP17.36■□□□□ 0.37
BRD9-208ENST00000489816 DCAF17Q5H9S7 520 aaPredicted RBP17.36■□□□□ 0.37
BRD9-208ENST00000489816 PAPD7Q5XG87 772 aaKnown RBP17.36■□□□□ 0.37
BRD9-208ENST00000489816 PPP4R3AQ6IN85 833 aa17.36■□□□□ 0.37
BRD9-208ENST00000489816 CCDC84Q86UT8 332 aaPredicted RBP17.36■□□□□ 0.37
BRD9-208ENST00000489816 BAP1Q92560 729 aa17.36■□□□□ 0.37
BRD9-208ENST00000489816 PACSIN1Q9BY11 444 aa17.36■□□□□ 0.37
BRD9-208ENST00000489816 MYH7BA7E2Y1 1941 aa17.36■□□□□ 0.37
BRD9-208ENST00000489816 CLRN2A0PK11 232 aa17.36■□□□□ 0.37
BRD9-208ENST00000489816 FAM86B1E9PN63 330 aa17.36■□□□□ 0.37
BRD9-208ENST00000489816 MEIS2O14770 477 aa17.36■□□□□ 0.37
BRD9-208ENST00000489816 ATP8B1O43520 1251 aa17.36■□□□□ 0.37
BRD9-208ENST00000489816 FAM86B2P0C5J1 330 aa17.36■□□□□ 0.37
BRD9-208ENST00000489816 CYP11B2P19099 503 aa17.36■□□□□ 0.37
BRD9-208ENST00000489816 ARHGAP4P98171 946 aa17.36■□□□□ 0.37
BRD9-208ENST00000489816 HSP90B2PQ58FF3 399 aa17.36■□□□□ 0.37
BRD9-208ENST00000489816 FAM83BQ5T0W9 1011 aa17.36■□□□□ 0.37
BRD9-208ENST00000489816 TLR2O60603 784 aa17.36■□□□□ 0.37
BRD9-208ENST00000489816 TACC1O75410 805 aa17.36■□□□□ 0.37
BRD9-208ENST00000489816 POLD1P28340 1107 aa17.36■□□□□ 0.37
BRD9-208ENST00000489816 ZNF76P36508 570 aa17.36■□□□□ 0.37
BRD9-208ENST00000489816 ECE1P42892 770 aa17.36■□□□□ 0.37
BRD9-208ENST00000489816 ARSHQ5FYA8 562 aa17.36■□□□□ 0.37
BRD9-208ENST00000489816 ADAMTSL1Q8N6G6 1762 aa17.35■□□□□ 0.37
BRD9-208ENST00000489816 TAF1LQ8IZX4 1826 aa17.35■□□□□ 0.37
BRD9-208ENST00000489816 RRP1BQ14684 758 aaKnown RBP17.35■□□□□ 0.37
BRD9-208ENST00000489816 AOC3Q16853 763 aa17.35■□□□□ 0.37
BRD9-208ENST00000489816 KRT27Q7Z3Y8 459 aa17.35■□□□□ 0.37
BRD9-208ENST00000489816 PKD2L1Q9P0L9 805 aa17.35■□□□□ 0.37
BRD9-208ENST00000489816 SWAP70Q9UH65 585 aa17.35■□□□□ 0.37
BRD9-208ENST00000489816 TRPC5Q9UL62 973 aaPredicted RBP17.35■□□□□ 0.37
BRD9-208ENST00000489816 POTEB2H3BUK9 544 aa17.35■□□□□ 0.37
BRD9-208ENST00000489816 NR2F2P24468 414 aa17.35■□□□□ 0.37
BRD9-208ENST00000489816 LRRC63Q05C16 580 aa17.35■□□□□ 0.37
BRD9-208ENST00000489816 CCDC181Q5TID7 509 aa17.35■□□□□ 0.37
BRD9-208ENST00000489816 BHMT2Q9H2M3 363 aa17.35■□□□□ 0.37
BRD9-208ENST00000489816 SH2D4AQ9H788 454 aa17.35■□□□□ 0.37
BRD9-208ENST00000489816 A0A0U1RQG5 324 aaPredicted RBP17.34■□□□□ 0.37
BRD9-208ENST00000489816 TCP10L2B9ZVM9 353 aa17.34■□□□□ 0.37
BRD9-208ENST00000489816 CFBP00751 764 aa17.34■□□□□ 0.37
BRD9-208ENST00000489816 CAPN2P17655 700 aa17.34■□□□□ 0.37
BRD9-208ENST00000489816 SLC9A1P19634 815 aa17.34■□□□□ 0.37
BRD9-208ENST00000489816 CREG2Q8IUH2 290 aa17.34■□□□□ 0.37
BRD9-208ENST00000489816 CCDC65Q8IXS2 484 aa17.34■□□□□ 0.37
BRD9-208ENST00000489816 ESYT3A0FGR9 886 aa17.34■□□□□ 0.37
BRD9-208ENST00000489816 ANKRD65E5RJM6 399 aa17.34■□□□□ 0.37
BRD9-208ENST00000489816 NOL4O94818 638 aa17.34■□□□□ 0.37
BRD9-208ENST00000489816 NDUFB10O96000 172 aa17.34■□□□□ 0.37
BRD9-208ENST00000489816 PLS1Q14651 629 aa17.34■□□□□ 0.37
BRD9-208ENST00000489816 CCDC174Q6PII3 467 aa17.34■□□□□ 0.37
BRD9-208ENST00000489816 SFR1Q86XK3 245 aa17.34■□□□□ 0.37
BRD9-208ENST00000489816 HNRNPLLQ8WVV9 542 aaKnown RBP17.34■□□□□ 0.37
BRD9-208ENST00000489816 ZSCAN5CA6NGD5 496 aaPredicted RBP17.34■□□□□ 0.37
BRD9-208ENST00000489816 SPDYE3A6NKU9 549 aa17.34■□□□□ 0.37
BRD9-208ENST00000489816 MYBP10242 640 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms