RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 ME1P48163 572 aa15.67■□□□□ 0.1
C9orf3-221ENST00000489562 FXR2P51116 673 aaKnown RBP eCLIP15.67■□□□□ 0.1
C9orf3-221ENST00000489562 KRT76Q01546 638 aa15.67■□□□□ 0.1
C9orf3-221ENST00000489562 CCDC144BQ3MJ40 725 aa15.67■□□□□ 0.1
C9orf3-221ENST00000489562 DUSP28Q4G0W2 176 aa15.67■□□□□ 0.1
C9orf3-221ENST00000489562 MAP3K21Q5TCX8 1036 aa15.67■□□□□ 0.1
C9orf3-221ENST00000489562 TMEM87AQ8NBN3 555 aa15.67■□□□□ 0.1
C9orf3-221ENST00000489562 PRDM10Q9NQV6 1147 aa15.67■□□□□ 0.1
C9orf3-221ENST00000489562 FAM184BQ9ULE4 1060 aa15.67■□□□□ 0.1
C9orf3-221ENST00000489562 CUTAO60888 179 aa15.66■□□□□ 0.1
C9orf3-221ENST00000489562 ATP9AO75110 1047 aa15.66■□□□□ 0.1
C9orf3-221ENST00000489562 PRKAR2AP13861 404 aaKnown RBP15.66■□□□□ 0.1
C9orf3-221ENST00000489562 MARCKSP29966 332 aaPredicted RBP15.66■□□□□ 0.1
C9orf3-221ENST00000489562 LONP1P36776 959 aaKnown RBP15.66■□□□□ 0.1
C9orf3-221ENST00000489562 CACNB2Q08289 660 aaPredicted RBP15.66■□□□□ 0.1
C9orf3-221ENST00000489562 ITGB3BPQ13352 177 aaPredicted RBP15.66■□□□□ 0.1
C9orf3-221ENST00000489562 PPP2R5CQ13362 524 aa15.66■□□□□ 0.1
C9orf3-221ENST00000489562 PDIA5Q14554 519 aa15.66■□□□□ 0.1
C9orf3-221ENST00000489562 FBXO46Q6PJ61 603 aaPredicted RBP15.66■□□□□ 0.1
C9orf3-221ENST00000489562 METTL7BQ6UX53 244 aa15.66■□□□□ 0.1
C9orf3-221ENST00000489562 ZNF579Q8NAF0 562 aaKnown RBP15.66■□□□□ 0.1
C9orf3-221ENST00000489562 CHAMP1Q96JM3 812 aa15.66■□□□□ 0.1
C9orf3-221ENST00000489562 AK8Q96MA6 479 aa15.66■□□□□ 0.1
C9orf3-221ENST00000489562 JPH1Q9HDC5 661 aaPredicted RBP15.66■□□□□ 0.1
C9orf3-221ENST00000489562 PDGFCQ9NRA1 345 aa15.66■□□□□ 0.1
C9orf3-221ENST00000489562 FBXO2Q9UK22 296 aaPredicted RBP15.66■□□□□ 0.1
C9orf3-221ENST00000489562 Q9Y3F1 56 aa15.66■□□□□ 0.1
C9orf3-221ENST00000489562 STK24Q9Y6E0 443 aa15.66■□□□□ 0.1
C9orf3-221ENST00000489562 LOXHD1Q8IVV2 1947 aa15.66■□□□□ 0.1
C9orf3-221ENST00000489562 FRMPD3Q5JV73 1810 aa15.66■□□□□ 0.1
C9orf3-221ENST00000489562 VWA3AA6NCI4 1184 aa15.65■□□□□ 0.1
C9orf3-221ENST00000489562 DHX15O43143 795 aaKnown RBP15.65■□□□□ 0.1
C9orf3-221ENST00000489562 SEPT4O43236 478 aa15.65■□□□□ 0.1
C9orf3-221ENST00000489562 ARIH2O95376 493 aa15.65■□□□□ 0.1
C9orf3-221ENST00000489562 GGPS1O95749 300 aa15.65■□□□□ 0.1
C9orf3-221ENST00000489562 GH1P01241 217 aa15.65■□□□□ 0.1
C9orf3-221ENST00000489562 INHAP05111 366 aa15.65■□□□□ 0.1
C9orf3-221ENST00000489562 SFNP31947 248 aa15.65■□□□□ 0.1
C9orf3-221ENST00000489562 ADCYAP1R1P41586 468 aa15.65■□□□□ 0.1
C9orf3-221ENST00000489562 TNFAIP2Q03169 654 aa15.65■□□□□ 0.1
C9orf3-221ENST00000489562 LY6KQ17RY6 165 aa15.65■□□□□ 0.1
C9orf3-221ENST00000489562 SLC9C1Q4G0N8 1177 aa15.65■□□□□ 0.1
C9orf3-221ENST00000489562 PRAMEF19Q5SWL8 479 aa15.65■□□□□ 0.1
C9orf3-221ENST00000489562 CELF3Q5SZQ8 465 aaKnown RBP15.65■□□□□ 0.1
C9orf3-221ENST00000489562 ZNF746Q6NUN9 644 aaPredicted RBP15.65■□□□□ 0.1
C9orf3-221ENST00000489562 RDM1Q8NG50 284 aa15.65■□□□□ 0.1
C9orf3-221ENST00000489562 EMID1Q96A84 441 aaPredicted RBP15.65■□□□□ 0.1
C9orf3-221ENST00000489562 MLXIPQ9HAP2 919 aa15.65■□□□□ 0.1
C9orf3-221ENST00000489562 PKD2L1Q9P0L9 805 aa15.65■□□□□ 0.1
C9orf3-221ENST00000489562 SLC9A2Q9UBY0 812 aa15.65■□□□□ 0.1
C9orf3-221ENST00000489562 VAV3Q9UKW4 847 aa15.65■□□□□ 0.1
C9orf3-221ENST00000489562 MSCO60682 206 aa15.64■□□□□ 0.09
C9orf3-221ENST00000489562 FARP2O94887 1054 aaPredicted RBP15.64■□□□□ 0.09
C9orf3-221ENST00000489562 SMPD1P17405 629 aa15.64■□□□□ 0.09
C9orf3-221ENST00000489562 TECP42680 631 aa15.64■□□□□ 0.09
C9orf3-221ENST00000489562 JAK3P52333 1124 aa15.64■□□□□ 0.09
C9orf3-221ENST00000489562 SP2Q02086 613 aa15.64■□□□□ 0.09
C9orf3-221ENST00000489562 LAMC2Q13753 1193 aa15.64■□□□□ 0.09
C9orf3-221ENST00000489562 ADALQ6DHV7 355 aa15.64■□□□□ 0.09
C9orf3-221ENST00000489562 B3GNT9Q6UX72 402 aa15.64■□□□□ 0.09
C9orf3-221ENST00000489562 DHX37Q8IY37 1157 aaKnown RBP15.64■□□□□ 0.09
C9orf3-221ENST00000489562 SMAP1Q8IYB5 467 aaPredicted RBP15.64■□□□□ 0.09
C9orf3-221ENST00000489562 IGSF22Q8N9C0 903 aa15.64■□□□□ 0.09
C9orf3-221ENST00000489562 TRPV1Q8NER1 839 aa15.64■□□□□ 0.09
C9orf3-221ENST00000489562 ERMNQ8TAM6 284 aa15.64■□□□□ 0.09
C9orf3-221ENST00000489562 GDPD2Q9HCC8 539 aa15.64■□□□□ 0.09
C9orf3-221ENST00000489562 PCDHA7Q9UN72 937 aa15.64■□□□□ 0.09
C9orf3-221ENST00000489562 GOLGA6L4A6NEF3 574 aa15.63■□□□□ 0.09
C9orf3-221ENST00000489562 WDR64B1ANS9 1081 aa15.63■□□□□ 0.09
C9orf3-221ENST00000489562 SLC26A4O43511 780 aa15.63■□□□□ 0.09
C9orf3-221ENST00000489562 DUSP11O75319 330 aaKnown RBP15.63■□□□□ 0.09
C9orf3-221ENST00000489562 CNGA1P29973 690 aa15.63■□□□□ 0.09
C9orf3-221ENST00000489562 SPIRE1Q08AE8 756 aa15.63■□□□□ 0.09
C9orf3-221ENST00000489562 TRIM32Q13049 653 aa15.63■□□□□ 0.09
C9orf3-221ENST00000489562 IL17AQ16552 155 aa15.63■□□□□ 0.09
C9orf3-221ENST00000489562 HAUS3Q68CZ6 603 aa15.63■□□□□ 0.09
C9orf3-221ENST00000489562 CYFIP1Q7L576 1253 aa15.63■□□□□ 0.09
C9orf3-221ENST00000489562 NEK9Q8TD19 979 aa15.63■□□□□ 0.09
C9orf3-221ENST00000489562 GJA10Q969M2 543 aa15.63■□□□□ 0.09
C9orf3-221ENST00000489562 HMX1Q9NP08 348 aaPredicted RBP15.63■□□□□ 0.09
C9orf3-221ENST00000489562 LRWD1Q9UFC0 647 aa15.63■□□□□ 0.09
C9orf3-221ENST00000489562 GNEQ9Y223 722 aaKnown RBP15.63■□□□□ 0.09
C9orf3-221ENST00000489562 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.62■□□□□ 0.09
C9orf3-221ENST00000489562 A0A1W2PQ27 194 aa15.62■□□□□ 0.09
C9orf3-221ENST00000489562 A0A1W2PQ64 194 aa15.62■□□□□ 0.09
C9orf3-221ENST00000489562 A0A1W2PQD8 194 aa15.62■□□□□ 0.09
C9orf3-221ENST00000489562 DDX39AO00148 427 aaKnown RBP15.62■□□□□ 0.09
C9orf3-221ENST00000489562 NOP56O00567 594 aaKnown RBP15.62■□□□□ 0.09
C9orf3-221ENST00000489562 RARBP10826 455 aa15.62■□□□□ 0.09
C9orf3-221ENST00000489562 TXLNAP40222 546 aa15.62■□□□□ 0.09
C9orf3-221ENST00000489562 ARHGAP1Q07960 439 aa15.62■□□□□ 0.09
C9orf3-221ENST00000489562 BRDTQ58F21 947 aaPredicted RBP15.62■□□□□ 0.09
C9orf3-221ENST00000489562 AXDND1Q5T1B0 1012 aaPredicted RBP15.62■□□□□ 0.09
C9orf3-221ENST00000489562 NCAPH2Q6IBW4 605 aa15.62■□□□□ 0.09
C9orf3-221ENST00000489562 MIER3Q7Z3K6 550 aa15.62■□□□□ 0.09
C9orf3-221ENST00000489562 PPTC7Q8NI37 304 aa15.62■□□□□ 0.09
C9orf3-221ENST00000489562 UIMC1Q96RL1 719 aa15.62■□□□□ 0.09
C9orf3-221ENST00000489562 AP5M1Q9H0R1 490 aa15.62■□□□□ 0.09
C9orf3-221ENST00000489562 CSRNP2Q9H175 543 aa15.62■□□□□ 0.09
C9orf3-221ENST00000489562 UNC45AQ9H3U1 944 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms