RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 LRWD1Q9UFC0 647 aa7.14□□□□□ -1.27
SF3A3-208ENST00000489537 SERTAD1Q9UHV2 236 aa7.14□□□□□ -1.27
SF3A3-208ENST00000489537 ZBTB21Q9ULJ3 1066 aa7.14□□□□□ -1.27
SF3A3-208ENST00000489537 ABT1Q9ULW3 272 aaKnown RBP7.14□□□□□ -1.27
SF3A3-208ENST00000489537 MTMR7Q9Y216 660 aa7.14□□□□□ -1.27
SF3A3-208ENST00000489537 TLL2Q9Y6L7 1015 aa7.14□□□□□ -1.27
SF3A3-208ENST00000489537 PSME4Q14997 1843 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 FRMPD2Q68DX3 1309 aaPredicted RBP7.13□□□□□ -1.27
SF3A3-208ENST00000489537 PITPNM2Q9BZ72 1349 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 C19orf81C9J6K1 198 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 UBE2Q2LH0YL09 131 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 RAD21O60216 631 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 CELF2O95319 508 aaKnown RBP7.13□□□□□ -1.27
SF3A3-208ENST00000489537 NDUFB10O96000 172 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 CYP3A4P08684 503 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 LMOD1P29536 600 aaPredicted RBP7.13□□□□□ -1.27
SF3A3-208ENST00000489537 CIITAP33076 1130 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 SETQ01105 290 aaPredicted RBP7.13□□□□□ -1.27
SF3A3-208ENST00000489537 DPYDQ12882 1025 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 PNOCQ13519 176 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 TRIM14Q14142 442 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 AMHR2Q16671 573 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 QRICH1Q2TAL8 776 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 DPCR1Q3MIW9 517 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 Q4G0T1 1027 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 ZNF658Q5TYW1 1059 aaPredicted RBP7.13□□□□□ -1.27
SF3A3-208ENST00000489537 XRRA1Q6P2D8 792 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 C11orf57Q6ZUT1 292 aaPredicted RBP7.13□□□□□ -1.27
SF3A3-208ENST00000489537 MOB2Q70IA6 237 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 KCTD1Q719H9 257 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 SH3BP5LQ7L8J4 393 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 CABP7Q86V35 215 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 DHX40Q8IX18 779 aaKnown RBP7.13□□□□□ -1.27
SF3A3-208ENST00000489537 PDILTQ8N807 584 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 PRPF38AQ8NAV1 312 aaKnown RBP7.13□□□□□ -1.27
SF3A3-208ENST00000489537 ZC3H15Q8WU90 426 aaKnown RBP7.13□□□□□ -1.27
SF3A3-208ENST00000489537 PIBF1Q8WXW3 757 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 DHTKD1Q96HY7 919 aaPredicted RBP7.13□□□□□ -1.27
SF3A3-208ENST00000489537 FEZ1Q99689 392 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 ZNF341Q9BYN7 854 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 ANO3Q9BYT9 981 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 KIAA1683Q9H0B3 1180 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 ZNF408Q9H9D4 720 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 KBTBD4Q9NVX7 518 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 BIN2Q9UBW5 565 aaPredicted RBP7.13□□□□□ -1.27
SF3A3-208ENST00000489537 DDX25Q9UHL0 483 aaKnown RBP7.13□□□□□ -1.27
SF3A3-208ENST00000489537 RWDD2AQ9UIY3 292 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 PCDHA12Q9UN75 941 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 PCDHAC2Q9Y5I4 1007 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 CDK5RAP2Q96SN8 1893 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 ECM29Q5VYK3 1845 aa7.13□□□□□ -1.27
SF3A3-208ENST00000489537 MYPNQ86TC9 1320 aa7.12□□□□□ -1.27
SF3A3-208ENST00000489537 GREB1LQ9C091 1923 aaPredicted RBP7.12□□□□□ -1.27
SF3A3-208ENST00000489537 GOLGA6L9A6NEM1 432 aa7.12□□□□□ -1.27
SF3A3-208ENST00000489537 SPDYE5A6NIY4 337 aa7.12□□□□□ -1.27
SF3A3-208ENST00000489537 FAM155AB1AL88 458 aaPredicted RBP7.12□□□□□ -1.27
SF3A3-208ENST00000489537 USP17L10C9JJH3 530 aa7.12□□□□□ -1.27
SF3A3-208ENST00000489537 GCOM1H8Y6P7 765 aaPredicted RBP7.12□□□□□ -1.27
SF3A3-208ENST00000489537 RHOBTB3O94955 611 aa7.12□□□□□ -1.27
SF3A3-208ENST00000489537 POLR2MP0CAP2 368 aa7.12□□□□□ -1.27
SF3A3-208ENST00000489537 SFPQP23246 707 aaKnown RBP eCLIP7.12□□□□□ -1.27
SF3A3-208ENST00000489537 SREBF1P36956 1147 aa7.12□□□□□ -1.27
SF3A3-208ENST00000489537 CACNB3P54284 484 aa7.12□□□□□ -1.27
SF3A3-208ENST00000489537 OAZ1P54368 228 aa7.12□□□□□ -1.27
SF3A3-208ENST00000489537 UBASH3AP57075 661 aa7.12□□□□□ -1.27
SF3A3-208ENST00000489537 KIF4BQ2VIQ3 1234 aa7.12□□□□□ -1.27
SF3A3-208ENST00000489537 PRAMEF18Q5VWM3 479 aa7.12□□□□□ -1.27
SF3A3-208ENST00000489537 JAKMIP3Q5VZ66 844 aa7.12□□□□□ -1.27
SF3A3-208ENST00000489537 ZFPM1Q8IX07 1006 aa7.12□□□□□ -1.27
SF3A3-208ENST00000489537 NEK9Q8TD19 979 aa7.12□□□□□ -1.27
SF3A3-208ENST00000489537 SPIRE2Q8WWL2 714 aa7.12□□□□□ -1.27
SF3A3-208ENST00000489537 EPSTI1Q96J88 318 aa7.12□□□□□ -1.27
SF3A3-208ENST00000489537 MBOAT7Q96N66 472 aa7.12□□□□□ -1.27
SF3A3-208ENST00000489537 MTMR9Q96QG7 549 aa7.12□□□□□ -1.27
SF3A3-208ENST00000489537 C7orf25Q9BPX7 421 aa7.12□□□□□ -1.27
SF3A3-208ENST00000489537 WDR18Q9BV38 432 aa7.12□□□□□ -1.27
SF3A3-208ENST00000489537 RANBP17Q9H2T7 1088 aaKnown RBP7.12□□□□□ -1.27
SF3A3-208ENST00000489537 PICK1Q9NRD5 415 aa7.12□□□□□ -1.27
SF3A3-208ENST00000489537 EXOC1Q9NV70 894 aa7.12□□□□□ -1.27
SF3A3-208ENST00000489537 MAGEC2Q9UBF1 373 aaPredicted RBP7.12□□□□□ -1.27
SF3A3-208ENST00000489537 TCEAL9Q9UHQ7 104 aa7.12□□□□□ -1.27
SF3A3-208ENST00000489537 MAN1B1Q9UKM7 699 aa7.12□□□□□ -1.27
SF3A3-208ENST00000489537 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.12□□□□□ -1.272e-9■■■□□ 15.6
SF3A3-208ENST00000489537 MYH8P13535 1937 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 SYNRGQ9UMZ2 1314 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 CLRN2A0PK11 232 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 UNCXA6NJT0 531 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 B4DLN1 442 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 BIN1O00499 593 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 MAFGO15525 162 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 ZBED4O75132 1171 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 GDF11O95390 407 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 RPN1P04843 607 aaKnown RBP7.11□□□□□ -1.27
SF3A3-208ENST00000489537 CCNYL3P0C7X3 344 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 SMPD1P17405 629 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 EEF1GP26641 437 aaKnown RBP7.11□□□□□ -1.27
SF3A3-208ENST00000489537 NF2P35240 595 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 ZNF76P36508 570 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 TXKP42681 527 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 ARHGAP4P98171 946 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms