RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 TBX3O15119 743 aa16.09■□□□□ 0.17
CLDN11-209ENST00000489485 SPTLC2O15270 562 aa16.09■□□□□ 0.17
CLDN11-209ENST00000489485 SEPT4O43236 478 aa16.09■□□□□ 0.17
CLDN11-209ENST00000489485 ADCY6O43306 1168 aa16.09■□□□□ 0.17
CLDN11-209ENST00000489485 GGPS1O95749 300 aa16.09■□□□□ 0.17
CLDN11-209ENST00000489485 BMP15O95972 392 aa16.09■□□□□ 0.17
CLDN11-209ENST00000489485 OR52Z1P0C646 297 aa16.09■□□□□ 0.17
CLDN11-209ENST00000489485 KCNA2P16389 499 aa16.09■□□□□ 0.17
CLDN11-209ENST00000489485 PTGS1P23219 599 aa16.09■□□□□ 0.17
CLDN11-209ENST00000489485 ITGB3BPQ13352 177 aaPredicted RBP16.09■□□□□ 0.17
CLDN11-209ENST00000489485 NEDD9Q14511 834 aa16.09■□□□□ 0.17
CLDN11-209ENST00000489485 DUSP28Q4G0W2 176 aa16.09■□□□□ 0.17
CLDN11-209ENST00000489485 LRCH2Q5VUJ6 765 aa16.09■□□□□ 0.17
CLDN11-209ENST00000489485 CYFIP1Q7L576 1253 aa16.09■□□□□ 0.17
CLDN11-209ENST00000489485 SLFN12Q8IYM2 578 aa16.09■□□□□ 0.17
CLDN11-209ENST00000489485 HAS1Q92839 578 aa16.09■□□□□ 0.17
CLDN11-209ENST00000489485 COPS5Q92905 334 aa16.09■□□□□ 0.17
CLDN11-209ENST00000489485 LENG1Q96BZ8 264 aaPredicted RBP16.09■□□□□ 0.17
CLDN11-209ENST00000489485 FAM20AQ96MK3 541 aa16.09■□□□□ 0.17
CLDN11-209ENST00000489485 SENP7Q9BQF6 1050 aa16.09■□□□□ 0.17
CLDN11-209ENST00000489485 SDF4Q9BRK5 362 aa16.09■□□□□ 0.17
CLDN11-209ENST00000489485 BCAS3Q9H6U6 928 aa16.09■□□□□ 0.17
CLDN11-209ENST00000489485 MLXIPQ9HAP2 919 aa16.09■□□□□ 0.17
CLDN11-209ENST00000489485 TBC1D22BQ9NU19 505 aa16.09■□□□□ 0.17
CLDN11-209ENST00000489485 LAD1O00515 517 aa16.08■□□□□ 0.17
CLDN11-209ENST00000489485 GAS7O60861 476 aa16.08■□□□□ 0.17
CLDN11-209ENST00000489485 MCM4P33991 863 aa16.08■□□□□ 0.17
CLDN11-209ENST00000489485 ME1P48163 572 aa16.08■□□□□ 0.17
CLDN11-209ENST00000489485 ATP2C1P98194 919 aaPredicted RBP16.08■□□□□ 0.17
CLDN11-209ENST00000489485 SP4Q02446 784 aa16.08■□□□□ 0.17
CLDN11-209ENST00000489485 DHX37Q8IY37 1157 aaKnown RBP16.08■□□□□ 0.17
CLDN11-209ENST00000489485 C4orf32Q8N8J7 132 aa16.08■□□□□ 0.17
CLDN11-209ENST00000489485 GIMAP8Q8ND71 665 aaPredicted RBP16.08■□□□□ 0.17
CLDN11-209ENST00000489485 SLC5A5Q92911 643 aa16.08■□□□□ 0.17
CLDN11-209ENST00000489485 MTMR9Q96QG7 549 aa16.08■□□□□ 0.17
CLDN11-209ENST00000489485 TTC12Q9H892 705 aaPredicted RBP16.08■□□□□ 0.17
CLDN11-209ENST00000489485 PCDHA12Q9UN75 941 aa16.08■□□□□ 0.17
CLDN11-209ENST00000489485 MTFR1Q15390 333 aa16.08■□□□□ 0.16
CLDN11-209ENST00000489485 CSPP1Q1MSJ5 1256 aa16.08■□□□□ 0.16
CLDN11-209ENST00000489485 KCNG4Q8TDN1 519 aa16.08■□□□□ 0.16
CLDN11-209ENST00000489485 RIT2Q99578 217 aa16.08■□□□□ 0.16
CLDN11-209ENST00000489485 MCOLN1Q9GZU1 580 aa16.08■□□□□ 0.16
CLDN11-209ENST00000489485 TCEAL9Q9UHQ7 104 aa16.08■□□□□ 0.16
CLDN11-209ENST00000489485 NKRFO15226 690 aaKnown RBP eCLIP16.07■□□□□ 0.16
CLDN11-209ENST00000489485 DHX15O43143 795 aaKnown RBP16.07■□□□□ 0.16
CLDN11-209ENST00000489485 GH1P01241 217 aa16.07■□□□□ 0.16
CLDN11-209ENST00000489485 RARBP10826 455 aa16.07■□□□□ 0.16
CLDN11-209ENST00000489485 NFKBIBQ15653 356 aa16.07■□□□□ 0.16
CLDN11-209ENST00000489485 CELF3Q5SZQ8 465 aaKnown RBP16.07■□□□□ 0.16
CLDN11-209ENST00000489485 TEKT3Q9BXF9 490 aa16.07■□□□□ 0.16
CLDN11-209ENST00000489485 UNC93B1Q9H1C4 597 aa16.07■□□□□ 0.16
CLDN11-209ENST00000489485 JPH1Q9HDC5 661 aaPredicted RBP16.07■□□□□ 0.16
CLDN11-209ENST00000489485 NFASCO94856 1347 aa16.06■□□□□ 0.16
CLDN11-209ENST00000489485 ELP1O95163 1332 aa16.06■□□□□ 0.16
CLDN11-209ENST00000489485 DYNC1LI2O43237 492 aaPredicted RBP16.06■□□□□ 0.16
CLDN11-209ENST00000489485 CHMP2AO43633 222 aa16.06■□□□□ 0.16
CLDN11-209ENST00000489485 PPP6R2O75170 966 aa16.06■□□□□ 0.16
CLDN11-209ENST00000489485 PSMD10O75832 226 aa16.06■□□□□ 0.16
CLDN11-209ENST00000489485 FARP2O94887 1054 aaPredicted RBP16.06■□□□□ 0.16
CLDN11-209ENST00000489485 TECP42680 631 aa16.06■□□□□ 0.16
CLDN11-209ENST00000489485 METTL7BQ6UX53 244 aa16.06■□□□□ 0.16
CLDN11-209ENST00000489485 DTHD1Q6ZMT9 781 aa16.06■□□□□ 0.16
CLDN11-209ENST00000489485 TLK2Q86UE8 772 aa16.06■□□□□ 0.16
CLDN11-209ENST00000489485 TMEM87AQ8NBN3 555 aa16.06■□□□□ 0.16
CLDN11-209ENST00000489485 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.06■□□□□ 0.16
CLDN11-209ENST00000489485 RNF208Q9H0X6 261 aa16.06■□□□□ 0.16
CLDN11-209ENST00000489485 SLC9A2Q9UBY0 812 aa16.06■□□□□ 0.16
CLDN11-209ENST00000489485 DDX20Q9UHI6 824 aaKnown RBP16.06■□□□□ 0.16
CLDN11-209ENST00000489485 PCDHA7Q9UN72 937 aa16.06■□□□□ 0.16
CLDN11-209ENST00000489485 GNEQ9Y223 722 aaKnown RBP16.06■□□□□ 0.16
CLDN11-209ENST00000489485 VWA3AA6NCI4 1184 aa16.05■□□□□ 0.16
CLDN11-209ENST00000489485 NOP56O00567 594 aaKnown RBP16.05■□□□□ 0.16
CLDN11-209ENST00000489485 GADD45BO75293 160 aaPredicted RBP16.05■□□□□ 0.16
CLDN11-209ENST00000489485 DUSP11O75319 330 aaKnown RBP16.05■□□□□ 0.16
CLDN11-209ENST00000489485 CCL5P13501 91 aa16.05■□□□□ 0.16
CLDN11-209ENST00000489485 PRPHP41219 470 aa16.05■□□□□ 0.16
CLDN11-209ENST00000489485 TMEM266Q2M3C6 531 aa16.05■□□□□ 0.16
CLDN11-209ENST00000489485 ARL6IP4Q66PJ3 421 aaKnown RBP16.05■□□□□ 0.16
CLDN11-209ENST00000489485 OR6J1Q8NGC5 347 aa16.05■□□□□ 0.16
CLDN11-209ENST00000489485 ZNF333Q96JL9 665 aa16.05■□□□□ 0.16
CLDN11-209ENST00000489485 SPATA33Q96N06 139 aa16.05■□□□□ 0.16
CLDN11-209ENST00000489485 CLIC6Q96NY7 704 aa16.05■□□□□ 0.16
CLDN11-209ENST00000489485 AP5M1Q9H0R1 490 aa16.05■□□□□ 0.16
CLDN11-209ENST00000489485 LMBRD1Q9NUN5 540 aa16.05■□□□□ 0.16
CLDN11-209ENST00000489485 MSCO60682 206 aa16.05■□□□□ 0.16
CLDN11-209ENST00000489485 MYCNP04198 464 aaPredicted RBP16.05■□□□□ 0.16
CLDN11-209ENST00000489485 GRIN1Q05586 938 aa16.05■□□□□ 0.16
CLDN11-209ENST00000489485 ARHGAP1Q07960 439 aa16.05■□□□□ 0.16
CLDN11-209ENST00000489485 LAMC2Q13753 1193 aa16.05■□□□□ 0.16
CLDN11-209ENST00000489485 HSDL1Q3SXM5 330 aa16.05■□□□□ 0.16
CLDN11-209ENST00000489485 KRI1Q8N9T8 703 aaKnown RBP16.05■□□□□ 0.16
CLDN11-209ENST00000489485 XPNPEP3Q9NQH7 507 aa16.05■□□□□ 0.16
CLDN11-209ENST00000489485 SAMM50Q9Y512 469 aa16.05■□□□□ 0.16
CLDN11-209ENST00000489485 GOLGA6L4A6NEF3 574 aa16.04■□□□□ 0.16
CLDN11-209ENST00000489485 PGK1P00558 417 aa16.04■□□□□ 0.16
CLDN11-209ENST00000489485 C6orf222P0C671 652 aaPredicted RBP16.04■□□□□ 0.16
CLDN11-209ENST00000489485 DEKP35659 375 aaKnown RBP16.04■□□□□ 0.16
CLDN11-209ENST00000489485 KRT76Q01546 638 aa16.04■□□□□ 0.16
CLDN11-209ENST00000489485 IL17AQ16552 155 aa16.04■□□□□ 0.16
CLDN11-209ENST00000489485 ARMC5Q96C12 935 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms