RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-231	ENST00000489261	TC2N	Q8N9U0	490 aa		12.07	□□□□□ -0.48
ITSN1-231	ENST00000489261	RETREG2	Q8NC44	543 aa		12.07	□□□□□ -0.48
ITSN1-231	ENST00000489261	NEK9	Q8TD19	979 aa		12.07	□□□□□ -0.48
ITSN1-231	ENST00000489261	SLC5A5	Q92911	643 aa		12.07	□□□□□ -0.48
ITSN1-231	ENST00000489261	DNAJC19	Q96DA6	116 aa		12.07	□□□□□ -0.48
ITSN1-231	ENST00000489261	CDCA5	Q96FF9	252 aa		12.07	□□□□□ -0.48
ITSN1-231	ENST00000489261	C12orf42	Q96LP6	360 aa		12.07	□□□□□ -0.48
ITSN1-231	ENST00000489261	P2RX7	Q99572	595 aa	Known RBP	12.07	□□□□□ -0.48
ITSN1-231	ENST00000489261	DUSP9	Q99956	384 aa	Known RBP	12.07	□□□□□ -0.48
ITSN1-231	ENST00000489261	SLC38A10	Q9HBR0	1119 aa		12.07	□□□□□ -0.48
ITSN1-231	ENST00000489261	GBA2	Q9HCG7	927 aa	Predicted RBP	12.07	□□□□□ -0.48
ITSN1-231	ENST00000489261	PANK4	Q9NVE7	773 aa		12.07	□□□□□ -0.48
ITSN1-231	ENST00000489261	WBP1L	Q9NX94	342 aa		12.07	□□□□□ -0.48
ITSN1-231	ENST00000489261	CCPG1	Q9ULG6	757 aa		12.07	□□□□□ -0.48
ITSN1-231	ENST00000489261	MYH7B	A7E2Y1	1941 aa		12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	IGLV3-22	A0A075B6J6	115 aa		12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	FRMD3	A2A2Y4	597 aa		12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	LGALS16	A8MUM7	142 aa		12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	MEIS1	O00470	390 aa		12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	TEX33	O43247	280 aa		12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	GNA14	O95837	355 aa		12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	IDE	P14735	1019 aa		12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	HOXA13	P31271	388 aa	Predicted RBP	12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	OAZ1	P54368	228 aa		12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	BACE1	P56817	501 aa		12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	ZYX	Q15942	572 aa	Known RBP	12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	ECM1	Q16610	540 aa		12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	CEP55	Q53EZ4	464 aa		12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	HSP90AA4P	Q58FG1	418 aa		12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	NOL9	Q5SY16	702 aa	Known RBP	12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	NBPF12	Q5TAG4	269 aa	Predicted RBP	12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	ANKRD40	Q6AI12	368 aa		12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	NCAPH2	Q6IBW4	605 aa		12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	XRRA1	Q6P2D8	792 aa		12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	NYAP1	Q6ZVC0	841 aa		12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	CATSPER3	Q86XQ3	398 aa		12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	IRF2BP1	Q8IU81	584 aa		12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	MYOCD	Q8IZQ8	938 aa		12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	MB21D1	Q8N884	522 aa		12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	MYRIP	Q8NFW9	859 aa		12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	RIT2	Q99578	217 aa		12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	VAV3	Q9UKW4	847 aa		12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	PPP1R9A	Q9ULJ8	1098 aa		12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	MAPK8IP1	Q9UQF2	711 aa		12.06	□□□□□ -0.48
ITSN1-231	ENST00000489261	DYNC1I1	O14576	645 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	MED24	O75448	989 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	PSMD10	O75832	226 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	EYA4	O95677	639 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	FCER1A	P12319	257 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	CYP11B2	P19099	503 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	FECH	P22830	423 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	GTF2F1	P35269	517 aa	Known RBP eCLIP	12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	SLC12A3	P55017	1021 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	UBXN1	Q04323	297 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	COASY	Q13057	564 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	EPHA7	Q15375	998 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	TKFC	Q3LXA3	575 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	FAM26F	Q5R3K3	315 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	CEP135	Q66GS9	1140 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	E4F1	Q66K89	784 aa	Predicted RBP	12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	PPP4R3CP	Q6ZMV5	832 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	OTOP1	Q7RTM1	612 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	DYM	Q7RTS9	669 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	KCNK18	Q7Z418	384 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	GPBP1	Q86WP2	473 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	TMTC1	Q8IUR5	882 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	KIAA0895	Q8NCT3	520 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	ZNF280C	Q8ND82	737 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	CEP63	Q96MT8	703 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	MXRA8	Q9BRK3	442 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	VPS16	Q9H269	839 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	SLC39A2	Q9NP94	309 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	EMILIN3	Q9NT22	766 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	KCND2	Q9NZV8	630 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	ZNF536	O15090	1300 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	RPTOR	Q8N122	1335 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	OTOF	Q9HC10	1997 aa		12.05	□□□□□ -0.48
ITSN1-231	ENST00000489261	POTEB3	A0JP26	581 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	TRIM49B	A6NDI0	452 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261		E9PMD0	336 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	GAS7	O60861	476 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	MFAP3L	O75121	409 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	FLOT1	O75955	427 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	KRT18	P05783	430 aa	Known RBP	12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	SPATA31C1	P0DKV0	1188 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	GAP43	P17677	238 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	PTPRA	P18433	802 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	MAP2K2	P36507	400 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	PMS1	P54277	932 aa	Known RBP	12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	HUNK	P57058	714 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	FKBP1B	P68106	108 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	MAP2K1	Q02750	393 aa	Predicted RBP	12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	RBL2	Q08999	1139 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	TSR1	Q2NL82	804 aa	Known RBP	12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	FIGN	Q5HY92	759 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	FKBP15	Q5T1M5	1219 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	LRCH2	Q5VUJ6	765 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	POTEB	Q6S5H4	581 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	TMEM139	Q8IV31	216 aa		12.04	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms