RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 GPATCH4Q5T3I0 446 aaKnown RBP19.08■□□□□ 0.64
NPHP4-209ENST00000489180 DDIT3P35638 169 aa19.08■□□□□ 0.64
NPHP4-209ENST00000489180 HNRNPH2P55795 449 aaKnown RBP19.08■□□□□ 0.64
NPHP4-209ENST00000489180 DR1Q01658 176 aa19.08■□□□□ 0.64
NPHP4-209ENST00000489180 GPC4O75487 556 aa19.08■□□□□ 0.64
NPHP4-209ENST00000489180 PLA2G4BP0C869 781 aa19.08■□□□□ 0.64
NPHP4-209ENST00000489180 SNAP25P60880 206 aa19.08■□□□□ 0.64
NPHP4-209ENST00000489180 ARHGEF18Q6ZSZ5 1173 aa19.08■□□□□ 0.64
NPHP4-209ENST00000489180 TMTC3Q6ZXV5 915 aa19.08■□□□□ 0.64
NPHP4-209ENST00000489180 STK17AQ9UEE5 414 aa19.08■□□□□ 0.64
NPHP4-209ENST00000489180 FIS1Q9Y3D6 152 aa19.08■□□□□ 0.64
NPHP4-209ENST00000489180 SEMA3EO15041 775 aa19.07■□□□□ 0.64
NPHP4-209ENST00000489180 WDR46O15213 610 aaKnown RBP19.07■□□□□ 0.64
NPHP4-209ENST00000489180 TNFAIP1Q13829 316 aa19.07■□□□□ 0.64
NPHP4-209ENST00000489180 PDCD7Q8N8D1 485 aaKnown RBP19.07■□□□□ 0.64
NPHP4-209ENST00000489180 XDHP47989 1333 aa19.07■□□□□ 0.64
NPHP4-209ENST00000489180 ATP10DQ9P241 1426 aa19.07■□□□□ 0.64
NPHP4-209ENST00000489180 CPP00450 1065 aa19.07■□□□□ 0.64
NPHP4-209ENST00000489180 E2F4Q16254 413 aa19.07■□□□□ 0.64
NPHP4-209ENST00000489180 EAPPQ56P03 285 aaPredicted RBP19.07■□□□□ 0.64
NPHP4-209ENST00000489180 RESP18Q5W5W9 173 aa19.07■□□□□ 0.64
NPHP4-209ENST00000489180 CSRNP1Q96S65 589 aa19.07■□□□□ 0.64
NPHP4-209ENST00000489180 TRIM56Q9BRZ2 755 aaKnown RBP19.07■□□□□ 0.64
NPHP4-209ENST00000489180 MIS12Q9H081 205 aa19.07■□□□□ 0.64
NPHP4-209ENST00000489180 INTUQ9ULD6 942 aa19.07■□□□□ 0.64
NPHP4-209ENST00000489180 GSPT2Q8IYD1 628 aaKnown RBP19.07■□□□□ 0.64
NPHP4-209ENST00000489180 RASGRF2O14827 1237 aa19.06■□□□□ 0.64
NPHP4-209ENST00000489180 FAF1Q9UNN5 650 aaPredicted RBP19.06■□□□□ 0.64
NPHP4-209ENST00000489180 TRIM49BA6NDI0 452 aa19.06■□□□□ 0.64
NPHP4-209ENST00000489180 KCNQ4P56696 695 aa19.06■□□□□ 0.64
NPHP4-209ENST00000489180 THOC1Q96FV9 657 aaKnown RBP19.06■□□□□ 0.64
NPHP4-209ENST00000489180 CFAP36Q96G28 342 aa19.06■□□□□ 0.64
NPHP4-209ENST00000489180 CCDC68Q9H2F9 335 aa19.06■□□□□ 0.64
NPHP4-209ENST00000489180 UNC13AQ9UPW8 1703 aa19.06■□□□□ 0.64
NPHP4-209ENST00000489180 CCNYQ8ND76 341 aa19.06■□□□□ 0.64
NPHP4-209ENST00000489180 HVCN1Q96D96 273 aa19.06■□□□□ 0.64
NPHP4-209ENST00000489180 ZNF277Q9NRM2 450 aaPredicted RBP19.06■□□□□ 0.64
NPHP4-209ENST00000489180 ADAMTS1Q9UHI8 967 aa19.06■□□□□ 0.64
NPHP4-209ENST00000489180 ZNF449Q6P9G9 518 aa19.06■□□□□ 0.64
NPHP4-209ENST00000489180 ZMYND12Q9H0C1 365 aa19.06■□□□□ 0.64
NPHP4-209ENST00000489180 G3BP2Q9UN86 482 aaKnown RBP19.06■□□□□ 0.64
NPHP4-209ENST00000489180 MAGI3Q5TCQ9 1506 aa19.06■□□□□ 0.64
NPHP4-209ENST00000489180 METP08581 1390 aa19.06■□□□□ 0.64
NPHP4-209ENST00000489180 GOLGA8IPA6NC78 632 aa19.05■□□□□ 0.64
NPHP4-209ENST00000489180 GOLGA8JA6NMD2 632 aa19.05■□□□□ 0.64
NPHP4-209ENST00000489180 FAM160B1Q5W0V3 765 aa19.05■□□□□ 0.64
NPHP4-209ENST00000489180 DARS2Q6PI48 645 aaKnown RBP19.05■□□□□ 0.64
NPHP4-209ENST00000489180 ZBTB33Q86T24 672 aa19.05■□□□□ 0.64
NPHP4-209ENST00000489180 NEK9Q8TD19 979 aa19.05■□□□□ 0.64
NPHP4-209ENST00000489180 TRIM11Q96F44 468 aa19.05■□□□□ 0.64
NPHP4-209ENST00000489180 KDM6BO15054 1643 aa19.05■□□□□ 0.64
NPHP4-209ENST00000489180 ALS2CLQ60I27 953 aa19.05■□□□□ 0.64
NPHP4-209ENST00000489180 FMO2Q99518 471 aa19.05■□□□□ 0.64
NPHP4-209ENST00000489180 PLAAQ9Y263 795 aa19.05■□□□□ 0.64
NPHP4-209ENST00000489180 TOM1L1O75674 476 aa19.05■□□□□ 0.64
NPHP4-209ENST00000489180 CD58P19256 250 aa19.05■□□□□ 0.64
NPHP4-209ENST00000489180 KIF21AQ7Z4S6 1674 aa19.05■□□□□ 0.64
NPHP4-209ENST00000489180 SFI1A8K8P3 1242 aa19.05■□□□□ 0.64
NPHP4-209ENST00000489180 EVI5O60447 810 aa19.05■□□□□ 0.64
NPHP4-209ENST00000489180 ACSL3O95573 720 aa19.05■□□□□ 0.64
NPHP4-209ENST00000489180 SKA2Q8WVK7 121 aaPredicted RBP19.05■□□□□ 0.64
NPHP4-209ENST00000489180 CALN1Q9BXU9 219 aa19.05■□□□□ 0.64
NPHP4-209ENST00000489180 TLR3O15455 904 aaKnown RBP19.05■□□□□ 0.64
NPHP4-209ENST00000489180 MT-ND3P03897 115 aa19.05■□□□□ 0.64
NPHP4-209ENST00000489180 MYL1P05976 194 aa19.05■□□□□ 0.64
NPHP4-209ENST00000489180 CTTNQ14247 550 aaKnown RBP19.05■□□□□ 0.64
NPHP4-209ENST00000489180 C10orf76Q5T2E6 689 aa19.05■□□□□ 0.64
NPHP4-209ENST00000489180 HIBCHQ6NVY1 386 aaPredicted RBP19.05■□□□□ 0.64
NPHP4-209ENST00000489180 NLRP7Q8WX94 980 aa19.05■□□□□ 0.64
NPHP4-209ENST00000489180 ANKRD36BP1Q96IX9 119 aa19.05■□□□□ 0.64
NPHP4-209ENST00000489180 EXOC1LA0A1B0GW35 172 aa19.04■□□□□ 0.64
NPHP4-209ENST00000489180 USP27XA6NNY8 438 aa19.04■□□□□ 0.64
NPHP4-209ENST00000489180 PPEF1O14829 653 aaPredicted RBP19.04■□□□□ 0.64
NPHP4-209ENST00000489180 KIF22Q14807 665 aa19.04■□□□□ 0.64
NPHP4-209ENST00000489180 WHAMMQ8TF30 809 aa19.04■□□□□ 0.64
NPHP4-209ENST00000489180 CEP170P1Q96L14 293 aa19.04■□□□□ 0.64
NPHP4-209ENST00000489180 TSPYL2Q9H2G4 693 aaPredicted RBP19.04■□□□□ 0.64
NPHP4-209ENST00000489180 RNF14Q9UBS8 474 aa19.04■□□□□ 0.64
NPHP4-209ENST00000489180 MCF2LO15068 1137 aa19.04■□□□□ 0.64
NPHP4-209ENST00000489180 PLS3P13797 630 aa19.04■□□□□ 0.64
NPHP4-209ENST00000489180 OSTNP61366 133 aa19.04■□□□□ 0.64
NPHP4-209ENST00000489180 RASGRF1Q13972 1273 aa19.04■□□□□ 0.64
NPHP4-209ENST00000489180 PRPSAP1Q14558 356 aa19.04■□□□□ 0.64
NPHP4-209ENST00000489180 KCTD6Q8NC69 237 aa19.04■□□□□ 0.64
NPHP4-209ENST00000489180 FAM149B1Q96BN6 582 aa19.04■□□□□ 0.64
NPHP4-209ENST00000489180 NACC1Q96RE7 527 aa19.04■□□□□ 0.64
NPHP4-209ENST00000489180 CNOT10Q9H9A5 744 aaKnown RBP19.04■□□□□ 0.64
NPHP4-209ENST00000489180 NXF1Q9UBU9 619 aaKnown RBP19.04■□□□□ 0.64
NPHP4-209ENST00000489180 TFAMQ00059 246 aaKnown RBP19.04■□□□□ 0.64
NPHP4-209ENST00000489180 HDLBPQ00341 1268 aaKnown RBP19.04■□□□□ 0.64
NPHP4-209ENST00000489180 NAA30Q147X3 362 aaPredicted RBP19.04■□□□□ 0.64
NPHP4-209ENST00000489180 DNAJC24Q6P3W2 148 aa19.04■□□□□ 0.64
NPHP4-209ENST00000489180 INO80B-WBP1J3KQ70 363 aa19.04■□□□□ 0.64
NPHP4-209ENST00000489180 GCFC2P16383 781 aaKnown RBP19.04■□□□□ 0.64
NPHP4-209ENST00000489180 HOXA13P31271 388 aaPredicted RBP19.04■□□□□ 0.64
NPHP4-209ENST00000489180 TAF11Q15544 211 aa19.04■□□□□ 0.64
NPHP4-209ENST00000489180 CCDC144BQ3MJ40 725 aa19.04■□□□□ 0.64
NPHP4-209ENST00000489180 PPWD1Q96BP3 646 aaKnown RBP19.04■□□□□ 0.64
NPHP4-209ENST00000489180 INO80BQ9C086 356 aaPredicted RBP19.04■□□□□ 0.64
NPHP4-209ENST00000489180 PALM3A6NDB9 673 aaPredicted RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms