RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 SUSD5O60279 629 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 BRINP1O60477 761 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 TCEA3O75764 348 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 HTR3BO95264 441 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 HSP90AA1P07900 732 aaKnown RBP4.28□□□□□ -1.72
PRPF4-203ENST00000488937 IFIT2P09913 472 aaKnown RBP4.28□□□□□ -1.72
PRPF4-203ENST00000488937 SRGNP10124 158 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 PHKG2P15735 406 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 PLCG1P19174 1290 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 L1CAMP32004 1257 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 VIPR1P32241 457 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 YBX1P67809 324 aaKnown RBP4.28□□□□□ -1.72
PRPF4-203ENST00000488937 ITKQ08881 620 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 STAT4Q14765 748 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 KRT72Q14CN4 511 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 SLC14A2Q15849 920 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 TRIM61Q5EBN2 209 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 CYB5RLQ6IPT4 315 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 ZNF280DQ6N043 979 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 TOGARAM2Q6ZUX3 1019 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 FAM129CQ86XR2 697 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 SPATS2Q86XZ4 545 aaKnown RBP4.28□□□□□ -1.72
PRPF4-203ENST00000488937 DTWD2Q8NBA8 298 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 TP53I13Q8NBR0 393 aaPredicted RBP4.28□□□□□ -1.72
PRPF4-203ENST00000488937 LINC01599Q8WXQ3 324 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 MTMR8Q96EF0 704 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 SMAD5Q99717 465 aaKnown RBP4.28□□□□□ -1.72
PRPF4-203ENST00000488937 DHRS4Q9BTZ2 278 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 PPCSQ9HAB8 311 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 NGRNQ9NPE2 291 aaKnown RBP4.28□□□□□ -1.72
PRPF4-203ENST00000488937 PRDM11Q9NQV5 511 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 LUZP4Q9P127 313 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 REV1Q9UBZ9 1251 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 TRHDEQ9UKU6 1024 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 NOB1Q9ULX3 412 aaKnown RBP4.28□□□□□ -1.72
PRPF4-203ENST00000488937 CEP131Q9UPN4 1083 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 PCDHB14Q9Y5E9 798 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 SLC12A7Q9Y666 1083 aa4.28□□□□□ -1.72
PRPF4-203ENST00000488937 WASH4PA8MWX3 477 aa4.27□□□□□ -1.73
PRPF4-203ENST00000488937 KRTAP29-1A8MX34 341 aaPredicted RBP4.27□□□□□ -1.73
PRPF4-203ENST00000488937 VSTM5A8MXK1 200 aa4.27□□□□□ -1.73
PRPF4-203ENST00000488937 K7ESF4 209 aa4.27□□□□□ -1.73
PRPF4-203ENST00000488937 DNAJA2O60884 412 aa4.27□□□□□ -1.73
PRPF4-203ENST00000488937 DNAJC8O75937 253 aaPredicted RBP4.27□□□□□ -1.73
PRPF4-203ENST00000488937 MYL3P08590 195 aa4.27□□□□□ -1.73
PRPF4-203ENST00000488937 U2AF1L5P0DN76 240 aaPredicted RBP4.27□□□□□ -1.73
PRPF4-203ENST00000488937 ZSCAN20P17040 1043 aaPredicted RBP4.27□□□□□ -1.73
PRPF4-203ENST00000488937 SERPINB3P29508 390 aa4.27□□□□□ -1.73
PRPF4-203ENST00000488937 KIR2DL1P43626 348 aaPredicted RBP4.27□□□□□ -1.73
PRPF4-203ENST00000488937 KIR2DL2P43627 348 aaPredicted RBP4.27□□□□□ -1.73
PRPF4-203ENST00000488937 TRAPPC10P48553 1259 aa4.27□□□□□ -1.73
PRPF4-203ENST00000488937 NEK3P51956 506 aa4.27□□□□□ -1.73
PRPF4-203ENST00000488937 ZNF280AP59817 542 aaPredicted RBP4.27□□□□□ -1.73
PRPF4-203ENST00000488937 U2AF1Q01081 240 aaKnown RBP eCLIP4.27□□□□□ -1.73
PRPF4-203ENST00000488937 GBX1Q14549 363 aa4.27□□□□□ -1.73
PRPF4-203ENST00000488937 SYDE2Q5VT97 1194 aa4.27□□□□□ -1.73
PRPF4-203ENST00000488937 IL31Q6EBC2 164 aa4.27□□□□□ -1.73
PRPF4-203ENST00000488937 MORC1Q86VD1 984 aa4.27□□□□□ -1.73
PRPF4-203ENST00000488937 AHI1Q8N157 1196 aa4.27□□□□□ -1.73
PRPF4-203ENST00000488937 TTC9BQ8N6N2 239 aa4.27□□□□□ -1.73
PRPF4-203ENST00000488937 TEX19Q8NA77 164 aa4.27□□□□□ -1.73
PRPF4-203ENST00000488937 DNAJB8Q8NHS0 232 aa4.27□□□□□ -1.73
PRPF4-203ENST00000488937 JPH3Q8WXH2 748 aaPredicted RBP4.27□□□□□ -1.73
PRPF4-203ENST00000488937 KLHL6Q8WZ60 621 aa4.27□□□□□ -1.73
PRPF4-203ENST00000488937 PWWP2AQ96N64 755 aa4.27□□□□□ -1.73
PRPF4-203ENST00000488937 ARHGEF4Q9NR80 690 aa4.27□□□□□ -1.73
PRPF4-203ENST00000488937 USP40Q9NVE5 1235 aa4.27□□□□□ -1.73
PRPF4-203ENST00000488937 USP25Q9UHP3 1055 aa4.27□□□□□ -1.73
PRPF4-203ENST00000488937 LTBP3Q9NS15 1303 aa4.26□□□□□ -1.73
PRPF4-203ENST00000488937 NPHP1O15259 732 aa4.26□□□□□ -1.73
PRPF4-203ENST00000488937 FBXO21O94952 628 aa4.26□□□□□ -1.73
PRPF4-203ENST00000488937 CAPNS1P04632 268 aa4.26□□□□□ -1.73
PRPF4-203ENST00000488937 ITGB3P05106 788 aa4.26□□□□□ -1.73
PRPF4-203ENST00000488937 MPOP05164 745 aa4.26□□□□□ -1.73
PRPF4-203ENST00000488937 LDHCP07864 332 aa4.26□□□□□ -1.73
PRPF4-203ENST00000488937 ACRP10323 421 aa4.26□□□□□ -1.73
PRPF4-203ENST00000488937 PNLIPP16233 465 aa4.26□□□□□ -1.73
PRPF4-203ENST00000488937 BPIP17213 487 aa4.26□□□□□ -1.73
PRPF4-203ENST00000488937 TYRP1P17643 537 aa4.26□□□□□ -1.73
PRPF4-203ENST00000488937 CDR1P51861 262 aa4.26□□□□□ -1.73
PRPF4-203ENST00000488937 TEKQ02763 1124 aa4.26□□□□□ -1.73
PRPF4-203ENST00000488937 STRN3Q13033 797 aa4.26□□□□□ -1.73
PRPF4-203ENST00000488937 PICALMQ13492 652 aa4.26□□□□□ -1.73
PRPF4-203ENST00000488937 SEPT7Q16181 437 aaKnown RBP4.26□□□□□ -1.73
PRPF4-203ENST00000488937 LRRFIP1Q32MZ4 808 aaKnown RBP4.26□□□□□ -1.73
PRPF4-203ENST00000488937 FAM209AQ5JX71 171 aa4.26□□□□□ -1.73
PRPF4-203ENST00000488937 CNNM4Q6P4Q7 775 aa4.26□□□□□ -1.73
PRPF4-203ENST00000488937 PKN3Q6P5Z2 889 aa4.26□□□□□ -1.73
PRPF4-203ENST00000488937 VHLLQ6RSH7 139 aa4.26□□□□□ -1.73
PRPF4-203ENST00000488937 RNF111Q6ZNA4 994 aa4.26□□□□□ -1.73
PRPF4-203ENST00000488937 CNTD1Q8N815 330 aa4.26□□□□□ -1.73
PRPF4-203ENST00000488937 ENAHQ8N8S7 591 aaPredicted RBP4.26□□□□□ -1.73
PRPF4-203ENST00000488937 USP33Q8TEY7 942 aa4.26□□□□□ -1.73
PRPF4-203ENST00000488937 CYB5D2Q8WUJ1 264 aa4.26□□□□□ -1.73
PRPF4-203ENST00000488937 TIFAQ96CG3 184 aa4.26□□□□□ -1.73
PRPF4-203ENST00000488937 TRMT2BQ96GJ1 504 aaKnown RBP4.26□□□□□ -1.73
PRPF4-203ENST00000488937 DPH2Q9BQC3 489 aaPredicted RBP4.26□□□□□ -1.73
PRPF4-203ENST00000488937 MTFR1LQ9H019 292 aa4.26□□□□□ -1.73
PRPF4-203ENST00000488937 ANTXR1Q9H6X2 564 aa4.26□□□□□ -1.73
PRPF4-203ENST00000488937 TRIM39Q9HCM9 518 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms