RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-215ENST00000488914 CROTQ9UKG9 612 aa6.98□□□□□ -1.29
CTNNB1-215ENST00000488914 B4GALT3O60512 393 aa6.97□□□□□ -1.29
CTNNB1-215ENST00000488914 PLATP00750 562 aa6.97□□□□□ -1.29
CTNNB1-215ENST00000488914 LTFP02788 710 aa6.97□□□□□ -1.29
CTNNB1-215ENST00000488914 MAGEA10P43363 369 aaPredicted RBP6.97□□□□□ -1.29
CTNNB1-215ENST00000488914 KIAA2012Q0VF49 1180 aa6.97□□□□□ -1.29
CTNNB1-215ENST00000488914 HSP90AA2PQ14568 343 aaPredicted RBP6.97□□□□□ -1.29
CTNNB1-215ENST00000488914 LIMS2Q7Z4I7 341 aa6.97□□□□□ -1.29
CTNNB1-215ENST00000488914 PROSER1Q86XN7 944 aa6.97□□□□□ -1.29
CTNNB1-215ENST00000488914 FAM9AQ8IZU1 332 aaPredicted RBP6.97□□□□□ -1.29
CTNNB1-215ENST00000488914 ZCCHC14Q8WYQ9 949 aaKnown RBP6.97□□□□□ -1.29
CTNNB1-215ENST00000488914 POLR3GLQ9BT43 218 aa6.97□□□□□ -1.29
CTNNB1-215ENST00000488914 SSBP3Q9BWW4 388 aaPredicted RBP6.97□□□□□ -1.29
CTNNB1-215ENST00000488914 SLC6A20Q9NP91 592 aa6.97□□□□□ -1.29
CTNNB1-215ENST00000488914 PABPC1P11940 636 aaKnown RBP6.96□□□□□ -1.3
CTNNB1-215ENST00000488914 ZNF827Q17R98 1081 aa6.96□□□□□ -1.3
CTNNB1-215ENST00000488914 LGI4Q8N135 537 aa6.96□□□□□ -1.3
CTNNB1-215ENST00000488914 MBD6Q96DN6 1003 aa6.96□□□□□ -1.3
CTNNB1-215ENST00000488914 LCORQ96JN0 433 aaPredicted RBP6.96□□□□□ -1.3
CTNNB1-215ENST00000488914 YTHDC1Q96MU7 727 aaKnown RBP6.96□□□□□ -1.3
CTNNB1-215ENST00000488914 KCNJ15Q99712 375 aa6.96□□□□□ -1.3
CTNNB1-215ENST00000488914 AARSD1Q9BTE6 412 aaKnown RBP6.96□□□□□ -1.3
CTNNB1-215ENST00000488914 KRTAP3-1Q9BYR8 98 aa6.96□□□□□ -1.3
CTNNB1-215ENST00000488914 SMPD4Q9NXE4 827 aa6.96□□□□□ -1.3
CTNNB1-215ENST00000488914 BCCIPQ9P287 314 aaKnown RBP eCLIP6.96□□□□□ -1.3
CTNNB1-215ENST00000488914 CNOT11Q9UKZ1 510 aaKnown RBP6.96□□□□□ -1.3
CTNNB1-215ENST00000488914 ADAM17P78536 824 aa6.95□□□□□ -1.3
CTNNB1-215ENST00000488914 RAB33AQ14088 237 aa6.95□□□□□ -1.3
CTNNB1-215ENST00000488914 ZXDCQ2QGD7 858 aaPredicted RBP6.95□□□□□ -1.3
CTNNB1-215ENST00000488914 LBX2Q6XYB7 198 aa6.95□□□□□ -1.3
CTNNB1-215ENST00000488914 OTOP3Q7RTS5 596 aa6.95□□□□□ -1.3
CTNNB1-215ENST00000488914 SGSM3Q96HU1 749 aa6.95□□□□□ -1.3
CTNNB1-215ENST00000488914 CLIC6Q96NY7 704 aa6.95□□□□□ -1.3
CTNNB1-215ENST00000488914 TELO2Q9Y4R8 837 aa6.95□□□□□ -1.3
CTNNB1-215ENST00000488914 ASXL2Q76L83 1435 aa6.94□□□□□ -1.3
CTNNB1-215ENST00000488914 NKRFO15226 690 aaKnown RBP eCLIP6.94□□□□□ -1.3
CTNNB1-215ENST00000488914 CYP1A1P04798 512 aaPredicted RBP6.94□□□□□ -1.3
CTNNB1-215ENST00000488914 FGFR1P11362 822 aa6.94□□□□□ -1.3
CTNNB1-215ENST00000488914 PUM1Q14671 1186 aaKnown RBP eCLIP6.94□□□□□ -1.3
CTNNB1-215ENST00000488914 RSPO2Q6UXX9 243 aaPredicted RBP6.94□□□□□ -1.3
CTNNB1-215ENST00000488914 NSMFQ6X4W1 530 aa6.94□□□□□ -1.3
CTNNB1-215ENST00000488914 PHOSPHO1Q8TCT1 267 aa6.94□□□□□ -1.3
CTNNB1-215ENST00000488914 DCAF4Q8WV16 495 aa6.94□□□□□ -1.3
CTNNB1-215ENST00000488914 LOXL4Q96JB6 756 aa6.94□□□□□ -1.3
CTNNB1-215ENST00000488914 C8orf49Q96NF6 230 aa6.94□□□□□ -1.3
CTNNB1-215ENST00000488914 GPR20Q99678 358 aa6.94□□□□□ -1.3
CTNNB1-215ENST00000488914 L2HGDHQ9H9P8 463 aa6.94□□□□□ -1.3
CTNNB1-215ENST00000488914 ZNF536O15090 1300 aa6.94□□□□□ -1.3
CTNNB1-215ENST00000488914 KRIT1O00522 736 aa6.93□□□□□ -1.3
CTNNB1-215ENST00000488914 COL6A1P12109 1028 aa6.93□□□□□ -1.3
CTNNB1-215ENST00000488914 GRK2P25098 689 aa6.93□□□□□ -1.3
CTNNB1-215ENST00000488914 GRK3P35626 688 aa6.93□□□□□ -1.3
CTNNB1-215ENST00000488914 TUSC3Q13454 348 aa6.93□□□□□ -1.3
CTNNB1-215ENST00000488914 BORAQ6PGQ7 559 aa6.93□□□□□ -1.3
CTNNB1-215ENST00000488914 SPATC1Q76KD6 591 aa6.93□□□□□ -1.3
CTNNB1-215ENST00000488914 FAM124AQ86V42 546 aa6.93□□□□□ -1.3
CTNNB1-215ENST00000488914 TMEM209Q96SK2 561 aa6.93□□□□□ -1.3
CTNNB1-215ENST00000488914 C9orf118A6NHY6 69 aa6.92□□□□□ -1.3
CTNNB1-215ENST00000488914 CYP4F22Q6NT55 531 aa6.92□□□□□ -1.3
CTNNB1-215ENST00000488914 TRMT10BQ6PF06 316 aaKnown RBP6.92□□□□□ -1.3
CTNNB1-215ENST00000488914 ST13P5Q8NFI4 369 aaPredicted RBP6.92□□□□□ -1.3
CTNNB1-215ENST00000488914 PTPN18Q99952 460 aa6.92□□□□□ -1.3
CTNNB1-215ENST00000488914 TMEM168Q9H0V1 697 aa6.92□□□□□ -1.3
CTNNB1-215ENST00000488914 HSPBP1Q9NZL4 362 aa6.92□□□□□ -1.3
CTNNB1-215ENST00000488914 PPP4R1LQ9P1A2 415 aa6.92□□□□□ -1.3
CTNNB1-215ENST00000488914 ST6GALNAC2Q9UJ37 374 aa6.92□□□□□ -1.3
CTNNB1-215ENST00000488914 TRAF6Q9Y4K3 522 aa6.92□□□□□ -1.3
CTNNB1-215ENST00000488914 TRAV20A0A0B4J274 112 aa6.91□□□□□ -1.3
CTNNB1-215ENST00000488914 IQCA1LA6NCM1 817 aa6.91□□□□□ -1.3
CTNNB1-215ENST00000488914 CKMP06732 381 aa6.91□□□□□ -1.3
CTNNB1-215ENST00000488914 GPR85P60893 370 aa6.91□□□□□ -1.3
CTNNB1-215ENST00000488914 HABP4Q5JVS0 413 aaKnown RBP6.91□□□□□ -1.3
CTNNB1-215ENST00000488914 STYK1Q6J9G0 422 aa6.91□□□□□ -1.3
CTNNB1-215ENST00000488914 DTX3Q8N9I9 347 aa6.91□□□□□ -1.3
CTNNB1-215ENST00000488914 NUDT10Q8NFP7 164 aa6.91□□□□□ -1.3
CTNNB1-215ENST00000488914 IGDCC4Q8TDY8 1250 aa6.91□□□□□ -1.3
CTNNB1-215ENST00000488914 NUDT11Q96G61 164 aa6.91□□□□□ -1.3
CTNNB1-215ENST00000488914 IPPKQ9H8X2 491 aa6.91□□□□□ -1.3
CTNNB1-215ENST00000488914 MAFKO60675 156 aa6.9□□□□□ -1.3
CTNNB1-215ENST00000488914 SOD2P04179 222 aa6.9□□□□□ -1.3
CTNNB1-215ENST00000488914 GNAT1P11488 350 aa6.9□□□□□ -1.3
CTNNB1-215ENST00000488914 IFRD2Q12894 506 aaPredicted RBP6.9□□□□□ -1.3
CTNNB1-215ENST00000488914 KIZQ2M2Z5 673 aa6.9□□□□□ -1.3
CTNNB1-215ENST00000488914 PAN2Q504Q3 1202 aaKnown RBP6.9□□□□□ -1.3
CTNNB1-215ENST00000488914 FOXB2Q5VYV0 432 aa6.9□□□□□ -1.3
CTNNB1-215ENST00000488914 PKN3Q6P5Z2 889 aa6.9□□□□□ -1.3
CTNNB1-215ENST00000488914 TRIM48Q8IWZ4 208 aa6.9□□□□□ -1.3
CTNNB1-215ENST00000488914 KBTBD2Q8IY47 623 aa6.9□□□□□ -1.3
CTNNB1-215ENST00000488914 TTLL11Q8NHH1 800 aa6.9□□□□□ -1.3
CTNNB1-215ENST00000488914 UHMK1Q8TAS1 419 aaKnown RBP6.9□□□□□ -1.3
CTNNB1-215ENST00000488914 SAMD11Q96NU1 681 aa6.9□□□□□ -1.3
CTNNB1-215ENST00000488914 ZDHHC9Q9Y397 364 aa6.9□□□□□ -1.3
CTNNB1-215ENST00000488914 TCRBV5S4A2TA0A5A2 114 aa6.89□□□□□ -1.31
CTNNB1-215ENST00000488914 LAMTOR5O43504 91 aa6.89□□□□□ -1.31
CTNNB1-215ENST00000488914 FAHP16930 419 aa6.89□□□□□ -1.31
CTNNB1-215ENST00000488914 ZNF20P17024 532 aa6.89□□□□□ -1.31
CTNNB1-215ENST00000488914 GLRBP48167 497 aa6.89□□□□□ -1.31
CTNNB1-215ENST00000488914 VASNQ6EMK4 673 aa6.89□□□□□ -1.31
CTNNB1-215ENST00000488914 IFNL3Q8IZI9 196 aa6.89□□□□□ -1.31
CTNNB1-215ENST00000488914 SH3RF2Q8TEC5 729 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms