RNA–Protein interactions for RNA: ENST00000488846.1

SMKR1-202, Transcript of small lysine rich protein 1, humanhuman

TSL 3

Gene SMKR1, Length 424 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-202ENST00000488846 DHX37Q8IY37 1157 aaKnown RBP10.09□□□□□ -0.79
SMKR1-202ENST00000488846 DIS3L2Q8IYB7 885 aaKnown RBP10.09□□□□□ -0.79
SMKR1-202ENST00000488846 FAM184AQ8NB25 1140 aa10.09□□□□□ -0.79
SMKR1-202ENST00000488846 AFG1LQ8WV93 481 aa10.09□□□□□ -0.79
SMKR1-202ENST00000488846 SEZ6LQ9BYH1 1024 aa10.09□□□□□ -0.79
SMKR1-202ENST00000488846 SENP6Q9GZR1 1112 aaPredicted RBP10.09□□□□□ -0.79
SMKR1-202ENST00000488846 FOXP1Q9H334 677 aaPredicted RBP10.09□□□□□ -0.79
SMKR1-202ENST00000488846 AGO4Q9HCK5 861 aaKnown RBP10.09□□□□□ -0.79
SMKR1-202ENST00000488846 BRMS1Q9HCU9 246 aa10.09□□□□□ -0.79
SMKR1-202ENST00000488846 POLR3EQ9NVU0 708 aa10.09□□□□□ -0.79
SMKR1-202ENST00000488846 KIF3AQ9Y496 699 aa10.09□□□□□ -0.79
SMKR1-202ENST00000488846 ALPK3Q96L96 1907 aa10.08□□□□□ -0.8
SMKR1-202ENST00000488846 DHX15O43143 795 aaKnown RBP10.08□□□□□ -0.8
SMKR1-202ENST00000488846 U2AF2P26368 475 aaKnown RBP eCLIP10.08□□□□□ -0.8
SMKR1-202ENST00000488846 CDK7P50613 346 aa10.08□□□□□ -0.8
SMKR1-202ENST00000488846 MLLT1Q03111 559 aaPredicted RBP10.08□□□□□ -0.8
SMKR1-202ENST00000488846 ITGB3BPQ13352 177 aaPredicted RBP10.08□□□□□ -0.8
SMKR1-202ENST00000488846 DGKDQ16760 1214 aa10.08□□□□□ -0.8
SMKR1-202ENST00000488846 INF2Q27J81 1249 aa10.08□□□□□ -0.8
SMKR1-202ENST00000488846 BRDTQ58F21 947 aaPredicted RBP10.08□□□□□ -0.8
SMKR1-202ENST00000488846 PIK3AP1Q6ZUJ8 805 aa10.08□□□□□ -0.8
SMKR1-202ENST00000488846 NEK8Q86SG6 692 aa10.08□□□□□ -0.8
SMKR1-202ENST00000488846 PLA2G4DQ86XP0 818 aa10.08□□□□□ -0.8
SMKR1-202ENST00000488846 HTATIP2Q9BUP3 242 aa10.08□□□□□ -0.8
SMKR1-202ENST00000488846 SMC3Q9UQE7 1217 aa10.08□□□□□ -0.8
SMKR1-202ENST00000488846 GRIN2DO15399 1336 aa10.07□□□□□ -0.8
SMKR1-202ENST00000488846 CCDC194A0A1B0GVG4 234 aa10.07□□□□□ -0.8
SMKR1-202ENST00000488846 FAM205CA6NFA0 338 aa10.07□□□□□ -0.8
SMKR1-202ENST00000488846 HAS3O00219 553 aa10.07□□□□□ -0.8
SMKR1-202ENST00000488846 IPO5O00410 1097 aaKnown RBP10.07□□□□□ -0.8
SMKR1-202ENST00000488846 MSH4O15457 936 aa10.07□□□□□ -0.8
SMKR1-202ENST00000488846 ATG7O95352 703 aa10.07□□□□□ -0.8
SMKR1-202ENST00000488846 F2P00734 622 aa10.07□□□□□ -0.8
SMKR1-202ENST00000488846 GCFC2P16383 781 aaKnown RBP10.07□□□□□ -0.8
SMKR1-202ENST00000488846 ZNF76P36508 570 aa10.07□□□□□ -0.8
SMKR1-202ENST00000488846 SAFBQ15424 915 aaKnown RBP eCLIP10.07□□□□□ -0.8
SMKR1-202ENST00000488846 LRRC26Q2I0M4 334 aa10.07□□□□□ -0.8
SMKR1-202ENST00000488846 B3GNT9Q6UX72 402 aa10.07□□□□□ -0.8
SMKR1-202ENST00000488846 CXCL17Q6UXB2 119 aa10.07□□□□□ -0.8
SMKR1-202ENST00000488846 CYFIP1Q7L576 1253 aa10.07□□□□□ -0.8
SMKR1-202ENST00000488846 ANKRD33Q7Z3H0 272 aa10.07□□□□□ -0.8
SMKR1-202ENST00000488846 NOSTRINQ8IVI9 506 aa10.07□□□□□ -0.8
SMKR1-202ENST00000488846 ETNPPLQ8TBG4 499 aa10.07□□□□□ -0.8
SMKR1-202ENST00000488846 KAT2BQ92831 832 aa10.07□□□□□ -0.8
SMKR1-202ENST00000488846 SLC5A5Q92911 643 aa10.07□□□□□ -0.8
SMKR1-202ENST00000488846 GLT1D1Q96MS3 346 aa10.07□□□□□ -0.8
SMKR1-202ENST00000488846 SPATA33Q96N06 139 aa10.07□□□□□ -0.8
SMKR1-202ENST00000488846 TOX2Q96NM4 488 aa10.07□□□□□ -0.8
SMKR1-202ENST00000488846 RIT2Q99578 217 aa10.07□□□□□ -0.8
SMKR1-202ENST00000488846 GPR20Q99678 358 aa10.07□□□□□ -0.8
SMKR1-202ENST00000488846 NAP1L4Q99733 375 aaKnown RBP10.07□□□□□ -0.8
SMKR1-202ENST00000488846 C16orf70Q9BSU1 422 aa10.07□□□□□ -0.8
SMKR1-202ENST00000488846 MTG1Q9BT17 334 aaPredicted RBP10.07□□□□□ -0.8
SMKR1-202ENST00000488846 MLXIPQ9HAP2 919 aa10.07□□□□□ -0.8
SMKR1-202ENST00000488846 KCNMB3Q9NPA1 279 aa10.07□□□□□ -0.8
SMKR1-202ENST00000488846 STARD7Q9NQZ5 370 aa10.07□□□□□ -0.8
SMKR1-202ENST00000488846 IGKV6D-21A0A0A0MT36 114 aa10.06□□□□□ -0.8
SMKR1-202ENST00000488846 A0A0U1RQG5 324 aaPredicted RBP10.06□□□□□ -0.8
SMKR1-202ENST00000488846 GSTTP1A0A1W2PQM5 241 aa10.06□□□□□ -0.8
SMKR1-202ENST00000488846 KIF28PB7ZC32 967 aa10.06□□□□□ -0.8
SMKR1-202ENST00000488846 ARVCFO00192 962 aa10.06□□□□□ -0.8
SMKR1-202ENST00000488846 TBX3O15119 743 aa10.06□□□□□ -0.8
SMKR1-202ENST00000488846 PSMD10O75832 226 aa10.06□□□□□ -0.8
SMKR1-202ENST00000488846 TDP2O95551 362 aa10.06□□□□□ -0.8
SMKR1-202ENST00000488846 GUCY1B3Q02153 619 aa10.06□□□□□ -0.8
SMKR1-202ENST00000488846 PRR16Q569H4 304 aa10.06□□□□□ -0.8
SMKR1-202ENST00000488846 NFRKBQ6P4R8 1299 aa10.06□□□□□ -0.8
SMKR1-202ENST00000488846 SESTD1Q86VW0 696 aa10.06□□□□□ -0.8
SMKR1-202ENST00000488846 SEPT1Q8WYJ6 367 aa10.06□□□□□ -0.8
SMKR1-202ENST00000488846 FERMT2Q96AC1 680 aa10.06□□□□□ -0.8
SMKR1-202ENST00000488846 ZNF577Q9BSK1 485 aa10.06□□□□□ -0.8
SMKR1-202ENST00000488846 TBC1D22BQ9NU19 505 aa10.06□□□□□ -0.8
SMKR1-202ENST00000488846 SLC9A2Q9UBY0 812 aa10.06□□□□□ -0.8
SMKR1-202ENST00000488846 TELO2Q9Y4R8 837 aa10.06□□□□□ -0.8
SMKR1-202ENST00000488846 PDE4DIPQ5VU43 2346 aa10.06□□□□□ -0.8
SMKR1-202ENST00000488846 DOCK5Q9H7D0 1870 aa10.06□□□□□ -0.8
SMKR1-202ENST00000488846 WNT7AO00755 349 aa10.05□□□□□ -0.8
SMKR1-202ENST00000488846 SLC37A4O43826 429 aa10.05□□□□□ -0.8
SMKR1-202ENST00000488846 LGR5O75473 907 aa10.05□□□□□ -0.8
SMKR1-202ENST00000488846 CCNE2O96020 404 aa10.05□□□□□ -0.8
SMKR1-202ENST00000488846 LGALS2P05162 132 aa10.05□□□□□ -0.8
SMKR1-202ENST00000488846 MYL3P08590 195 aa10.05□□□□□ -0.8
SMKR1-202ENST00000488846 HOXC8P31273 242 aa10.05□□□□□ -0.8
SMKR1-202ENST00000488846 TRAPPC10P48553 1259 aa10.05□□□□□ -0.8
SMKR1-202ENST00000488846 FOSBP53539 338 aa10.05□□□□□ -0.8
SMKR1-202ENST00000488846 RTP1P59025 263 aa10.05□□□□□ -0.8
SMKR1-202ENST00000488846 PTPN11Q06124 597 aaPredicted RBP10.05□□□□□ -0.8
SMKR1-202ENST00000488846 ORC2Q13416 577 aaPredicted RBP10.05□□□□□ -0.8
SMKR1-202ENST00000488846 ITGA7Q13683 1181 aa10.05□□□□□ -0.8
SMKR1-202ENST00000488846 LETM2Q2VYF4 491 aa10.05□□□□□ -0.8
SMKR1-202ENST00000488846 LARP1BQ659C4 914 aaKnown RBP10.05□□□□□ -0.8
SMKR1-202ENST00000488846 ZNF746Q6NUN9 644 aaPredicted RBP10.05□□□□□ -0.8
SMKR1-202ENST00000488846 ABHD15Q6UXT9 468 aa10.05□□□□□ -0.8
SMKR1-202ENST00000488846 HSCBQ8IWL3 235 aa10.05□□□□□ -0.8
SMKR1-202ENST00000488846 HAS1Q92839 578 aa10.05□□□□□ -0.8
SMKR1-202ENST00000488846 FAM20AQ96MK3 541 aa10.05□□□□□ -0.8
SMKR1-202ENST00000488846 SDF4Q9BRK5 362 aa10.05□□□□□ -0.8
SMKR1-202ENST00000488846 JPH1Q9HDC5 661 aaPredicted RBP10.05□□□□□ -0.8
SMKR1-202ENST00000488846 DDX25Q9UHL0 483 aaKnown RBP10.05□□□□□ -0.8
SMKR1-202ENST00000488846 MROH7Q68CQ1 1323 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms