RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 PYGMP11217 842 aa5.84□□□□□ -1.47
SSR1-209ENST00000488834 ATF2P15336 505 aa5.84□□□□□ -1.47
SSR1-209ENST00000488834 FBLN1P23142 703 aa5.84□□□□□ -1.47
SSR1-209ENST00000488834 GRIN1Q05586 938 aa5.84□□□□□ -1.47
SSR1-209ENST00000488834 FNDC3BQ53EP0 1204 aaKnown RBP5.84□□□□□ -1.47
SSR1-209ENST00000488834 TCERG1LQ5VWI1 586 aa5.84□□□□□ -1.47
SSR1-209ENST00000488834 ARHGAP36Q6ZRI8 547 aa5.84□□□□□ -1.47
SSR1-209ENST00000488834 C16orf86Q6ZW13 317 aa5.84□□□□□ -1.47
SSR1-209ENST00000488834 JAZF1Q86VZ6 243 aa5.84□□□□□ -1.47
SSR1-209ENST00000488834 FAM129CQ86XR2 697 aa5.84□□□□□ -1.47
SSR1-209ENST00000488834 C1QL4Q86Z23 238 aa5.84□□□□□ -1.47
SSR1-209ENST00000488834 TMEM151BQ8IW70 566 aa5.84□□□□□ -1.47
SSR1-209ENST00000488834 CISD2Q8N5K1 135 aaKnown RBP5.84□□□□□ -1.47
SSR1-209ENST00000488834 GSTCDQ8NEC7 633 aa5.84□□□□□ -1.47
SSR1-209ENST00000488834 DTLQ9NZJ0 730 aa5.84□□□□□ -1.47
SSR1-209ENST00000488834 ASH2LQ9UBL3 628 aa5.84□□□□□ -1.47
SSR1-209ENST00000488834 B4E1Z4 1266 aa5.83□□□□□ -1.48
SSR1-209ENST00000488834 PDE6AP16499 860 aa5.83□□□□□ -1.48
SSR1-209ENST00000488834 IGFBP6P24592 240 aaPredicted RBP5.83□□□□□ -1.48
SSR1-209ENST00000488834 AFF3P51826 1226 aaKnown RBP5.83□□□□□ -1.48
SSR1-209ENST00000488834 TUSC3Q13454 348 aa5.83□□□□□ -1.48
SSR1-209ENST00000488834 GPR19Q15760 415 aa5.83□□□□□ -1.48
SSR1-209ENST00000488834 TAF7LQ5H9L4 462 aa5.83□□□□□ -1.48
SSR1-209ENST00000488834 C16orf59Q7L2K0 433 aa5.83□□□□□ -1.48
SSR1-209ENST00000488834 FGD2Q7Z6J4 655 aa5.83□□□□□ -1.48
SSR1-209ENST00000488834 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.83□□□□□ -1.48
SSR1-209ENST00000488834 MIB1Q86YT6 1006 aa5.83□□□□□ -1.48
SSR1-209ENST00000488834 RBM12BQ8IXT5 1001 aaKnown RBP5.83□□□□□ -1.48
SSR1-209ENST00000488834 NLGN4XQ8N0W4 816 aa5.83□□□□□ -1.48
SSR1-209ENST00000488834 FAM26EQ8N5C1 309 aa5.83□□□□□ -1.48
SSR1-209ENST00000488834 UHMK1Q8TAS1 419 aaKnown RBP5.83□□□□□ -1.48
SSR1-209ENST00000488834 CD244Q9BZW8 370 aa5.83□□□□□ -1.48
SSR1-209ENST00000488834 PCDH18Q9HCL0 1135 aa5.83□□□□□ -1.48
SSR1-209ENST00000488834 COQ6Q9Y2Z9 468 aa5.83□□□□□ -1.48
SSR1-209ENST00000488834 TCRBV16S1A1N1A0A5B0 115 aa5.82□□□□□ -1.48
SSR1-209ENST00000488834 SMARCA5O60264 1052 aaPredicted RBP5.82□□□□□ -1.48
SSR1-209ENST00000488834 C8BP07358 591 aa5.82□□□□□ -1.48
SSR1-209ENST00000488834 CFPP27918 469 aa5.82□□□□□ -1.48
SSR1-209ENST00000488834 IGFALSP35858 605 aa5.82□□□□□ -1.48
SSR1-209ENST00000488834 FLT3P36888 993 aa5.82□□□□□ -1.48
SSR1-209ENST00000488834 FZD5Q13467 585 aa5.82□□□□□ -1.48
SSR1-209ENST00000488834 C21orf62-AS1Q17RA5 79 aa5.82□□□□□ -1.48
SSR1-209ENST00000488834 SPOCD1Q6ZMY3 1216 aa5.82□□□□□ -1.48
SSR1-209ENST00000488834 KCTD1Q719H9 257 aa5.82□□□□□ -1.48
SSR1-209ENST00000488834 DDX53Q86TM3 631 aaKnown RBP5.82□□□□□ -1.48
SSR1-209ENST00000488834 OSTM1Q86WC4 334 aa5.82□□□□□ -1.48
SSR1-209ENST00000488834 TMEFF1Q8IYR6 380 aa5.82□□□□□ -1.48
SSR1-209ENST00000488834 ZBTB8AQ96BR9 441 aa5.82□□□□□ -1.48
SSR1-209ENST00000488834 SCLYQ96I15 445 aa5.82□□□□□ -1.48
SSR1-209ENST00000488834 TRIM39Q9HCM9 518 aa5.82□□□□□ -1.48
SSR1-209ENST00000488834 CBLCQ9ULV8 474 aa5.82□□□□□ -1.48
SSR1-209ENST00000488834 CD2APQ9Y5K6 639 aa5.82□□□□□ -1.48
SSR1-209ENST00000488834 WNT9AO14904 365 aa5.81□□□□□ -1.48
SSR1-209ENST00000488834 KCNQ2O43526 872 aa5.81□□□□□ -1.48
SSR1-209ENST00000488834 IGSF3O75054 1194 aa5.81□□□□□ -1.48
SSR1-209ENST00000488834 LTFP02788 710 aa5.81□□□□□ -1.48
SSR1-209ENST00000488834 PABPC4Q13310 644 aaKnown RBP eCLIP5.81□□□□□ -1.48
SSR1-209ENST00000488834 SMAD4Q13485 552 aaKnown RBP5.81□□□□□ -1.48
SSR1-209ENST00000488834 PTRH1Q86Y79 214 aaKnown RBP5.81□□□□□ -1.48
SSR1-209ENST00000488834 IGSF22Q8N9C0 903 aa5.81□□□□□ -1.48
SSR1-209ENST00000488834 CLUHP3Q96NS8 147 aa5.81□□□□□ -1.48
SSR1-209ENST00000488834 RIC8BQ9NVN3 520 aa5.81□□□□□ -1.48
SSR1-209ENST00000488834 SRPK3Q9UPE1 567 aa5.81□□□□□ -1.48
SSR1-209ENST00000488834 ATP23Q9Y6H3 246 aa5.81□□□□□ -1.48
SSR1-209ENST00000488834 TLDC2A0PJX2 215 aa5.8□□□□□ -1.48
SSR1-209ENST00000488834 CLSTN1O94985 981 aa5.8□□□□□ -1.48
SSR1-209ENST00000488834 ASLP04424 464 aa5.8□□□□□ -1.48
SSR1-209ENST00000488834 JAM2P57087 298 aa5.8□□□□□ -1.48
SSR1-209ENST00000488834 PAN2Q504Q3 1202 aaKnown RBP5.8□□□□□ -1.48
SSR1-209ENST00000488834 HABP4Q5JVS0 413 aaKnown RBP5.8□□□□□ -1.48
SSR1-209ENST00000488834 BTBD8Q5XKL5 378 aa5.8□□□□□ -1.48
SSR1-209ENST00000488834 VASNQ6EMK4 673 aa5.8□□□□□ -1.48
SSR1-209ENST00000488834 TEPPQ6URK8 271 aa5.8□□□□□ -1.48
SSR1-209ENST00000488834 LCNL1Q6ZST4 164 aa5.8□□□□□ -1.48
SSR1-209ENST00000488834 UBE2R2Q712K3 238 aaPredicted RBP5.8□□□□□ -1.48
SSR1-209ENST00000488834 STK32CQ86UX6 486 aa5.8□□□□□ -1.48
SSR1-209ENST00000488834 C2orf69Q8N8R5 385 aa5.8□□□□□ -1.48
SSR1-209ENST00000488834 CLEC4DQ8WXI8 215 aa5.8□□□□□ -1.48
SSR1-209ENST00000488834 FEZ1Q99689 392 aa5.8□□□□□ -1.48
SSR1-209ENST00000488834 CELF4Q9BZC1 486 aaKnown RBP5.8□□□□□ -1.48
SSR1-209ENST00000488834 SLKQ9H2G2 1235 aaPredicted RBP5.8□□□□□ -1.48
SSR1-209ENST00000488834 SAMD15Q9P1V8 674 aa5.8□□□□□ -1.48
SSR1-209ENST00000488834 MAGEC2Q9UBF1 373 aaPredicted RBP5.8□□□□□ -1.48
SSR1-209ENST00000488834 TNPO3Q9Y5L0 923 aaKnown RBP5.8□□□□□ -1.48
SSR1-209ENST00000488834 KCNK3O14649 394 aa5.79□□□□□ -1.48
SSR1-209ENST00000488834 HIP1RO75146 1068 aa5.79□□□□□ -1.48
SSR1-209ENST00000488834 RFPL3O75679 317 aa5.79□□□□□ -1.48
SSR1-209ENST00000488834 NPTXRO95502 500 aa5.79□□□□□ -1.48
SSR1-209ENST00000488834 ZSCAN22P10073 491 aaPredicted RBP5.79□□□□□ -1.48
SSR1-209ENST00000488834 VMACQ2NL98 169 aa5.79□□□□□ -1.48
SSR1-209ENST00000488834 CR1LQ2VPA4 569 aa5.79□□□□□ -1.48
SSR1-209ENST00000488834 TKFCQ3LXA3 575 aa5.79□□□□□ -1.48
SSR1-209ENST00000488834 FIGNQ5HY92 759 aa5.79□□□□□ -1.48
SSR1-209ENST00000488834 ZCCHC8Q6NZY4 707 aaKnown RBP5.79□□□□□ -1.48
SSR1-209ENST00000488834 GIMAP6Q6P9H5 292 aa5.79□□□□□ -1.48
SSR1-209ENST00000488834 TMC5Q6UXY8 1006 aa5.79□□□□□ -1.48
SSR1-209ENST00000488834 TTLL7Q6ZT98 887 aa5.79□□□□□ -1.48
SSR1-209ENST00000488834 TTLL11Q8NHH1 800 aa5.79□□□□□ -1.48
SSR1-209ENST00000488834 FNIP1Q8TF40 1166 aa5.79□□□□□ -1.48
SSR1-209ENST00000488834 DACT3Q96B18 629 aaPredicted RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms