RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 NBPF20Q3BBV1 942 aa17.14■□□□□ 0.33
CXCL12-207ENST00000488591 LBHD1Q9BQE6 289 aaPredicted RBP17.14■□□□□ 0.33
CXCL12-207ENST00000488591 SDF4Q9BRK5 362 aa17.14■□□□□ 0.33
CXCL12-207ENST00000488591 BRMS1Q9HCU9 246 aa17.14■□□□□ 0.33
CXCL12-207ENST00000488591 TMEM39AQ9NV64 488 aa17.14■□□□□ 0.33
CXCL12-207ENST00000488591 PKD2L1Q9P0L9 805 aa17.14■□□□□ 0.33
CXCL12-207ENST00000488591 CCDC194A0A1B0GVG4 234 aa17.13■□□□□ 0.33
CXCL12-207ENST00000488591 JAK2O60674 1132 aa17.13■□□□□ 0.33
CXCL12-207ENST00000488591 ATP9AO75110 1047 aa17.13■□□□□ 0.33
CXCL12-207ENST00000488591 KCNA2P16389 499 aa17.13■□□□□ 0.33
CXCL12-207ENST00000488591 HMGN5P82970 282 aaKnown RBP17.13■□□□□ 0.33
CXCL12-207ENST00000488591 SETQ01105 290 aaPredicted RBP17.13■□□□□ 0.33
CXCL12-207ENST00000488591 FAM47CQ5HY64 1035 aa17.13■□□□□ 0.33
CXCL12-207ENST00000488591 NFRKBQ6P4R8 1299 aa17.13■□□□□ 0.33
CXCL12-207ENST00000488591 KRT25Q7Z3Z0 450 aa17.13■□□□□ 0.33
CXCL12-207ENST00000488591 PLA2G4DQ86XP0 818 aa17.13■□□□□ 0.33
CXCL12-207ENST00000488591 FAM126BQ8IXS8 530 aa17.13■□□□□ 0.33
CXCL12-207ENST00000488591 CYP2W1Q8TAV3 490 aa17.13■□□□□ 0.33
CXCL12-207ENST00000488591 CRYGNQ8WXF5 182 aa17.13■□□□□ 0.33
CXCL12-207ENST00000488591 BCAS3Q9H6U6 928 aa17.13■□□□□ 0.33
CXCL12-207ENST00000488591 PDLIM7Q9NR12 457 aa17.13■□□□□ 0.33
CXCL12-207ENST00000488591 GRIN2DO15399 1336 aa17.13■□□□□ 0.33
CXCL12-207ENST00000488591 CEP290O15078 2479 aa17.12■□□□□ 0.33
CXCL12-207ENST00000488591 M0R2N6 131 aa17.12■□□□□ 0.33
CXCL12-207ENST00000488591 SUPT20HL2P0C7V6 817 aa17.12■□□□□ 0.33
CXCL12-207ENST00000488591 ARP10275 920 aa17.12■□□□□ 0.33
CXCL12-207ENST00000488591 HOXD8P13378 290 aaPredicted RBP17.12■□□□□ 0.33
CXCL12-207ENST00000488591 CIITAP33076 1130 aa17.12■□□□□ 0.33
CXCL12-207ENST00000488591 SP4Q02446 784 aa17.12■□□□□ 0.33
CXCL12-207ENST00000488591 PTPN11Q06124 597 aaPredicted RBP17.12■□□□□ 0.33
CXCL12-207ENST00000488591 FAAP100Q0VG06 881 aa17.12■□□□□ 0.33
CXCL12-207ENST00000488591 ST3GAL1Q11201 340 aa17.12■□□□□ 0.33
CXCL12-207ENST00000488591 NONOQ15233 471 aaKnown RBP eCLIP17.12■□□□□ 0.33
CXCL12-207ENST00000488591 FAM184AQ8NB25 1140 aa17.12■□□□□ 0.33
CXCL12-207ENST00000488591 TBCKQ8TEA7 893 aa17.12■□□□□ 0.33
CXCL12-207ENST00000488591 GPR20Q99678 358 aa17.12■□□□□ 0.33
CXCL12-207ENST00000488591 AGO4Q9HCK5 861 aaKnown RBP17.12■□□□□ 0.33
CXCL12-207ENST00000488591 JPH1Q9HDC5 661 aaPredicted RBP17.12■□□□□ 0.33
CXCL12-207ENST00000488591 NFASCO94856 1347 aa17.12■□□□□ 0.33
CXCL12-207ENST00000488591 DNAH12Q6ZR08 3092 aa17.11■□□□□ 0.33
CXCL12-207ENST00000488591 FAM86B1E9PN63 330 aa17.11■□□□□ 0.33
CXCL12-207ENST00000488591 KIAA0355O15063 1070 aa17.11■□□□□ 0.33
CXCL12-207ENST00000488591 FAM86B2P0C5J1 330 aa17.11■□□□□ 0.33
CXCL12-207ENST00000488591 ZNF286BP0CG31 522 aa17.11■□□□□ 0.33
CXCL12-207ENST00000488591 RAG1P15918 1043 aa17.11■□□□□ 0.33
CXCL12-207ENST00000488591 KRT2P35908 639 aa17.11■□□□□ 0.33
CXCL12-207ENST00000488591 PSEN2P49810 448 aa17.11■□□□□ 0.33
CXCL12-207ENST00000488591 MFSD10Q14728 455 aa17.11■□□□□ 0.33
CXCL12-207ENST00000488591 NPY5RQ15761 445 aa17.11■□□□□ 0.33
CXCL12-207ENST00000488591 KIAA0753Q2KHM9 967 aa17.11■□□□□ 0.33
CXCL12-207ENST00000488591 PRR16Q569H4 304 aa17.11■□□□□ 0.33
CXCL12-207ENST00000488591 SH3RF1Q7Z6J0 888 aa17.11■□□□□ 0.33
CXCL12-207ENST00000488591 C7orf31Q8N865 590 aa17.11■□□□□ 0.33
CXCL12-207ENST00000488591 SEPT1Q8WYJ6 367 aa17.11■□□□□ 0.33
CXCL12-207ENST00000488591 KAT2BQ92831 832 aa17.11■□□□□ 0.33
CXCL12-207ENST00000488591 GJB4Q9NTQ9 266 aa17.11■□□□□ 0.33
CXCL12-207ENST00000488591 SLC9A2Q9UBY0 812 aa17.11■□□□□ 0.33
CXCL12-207ENST00000488591 SCN10AQ9Y5Y9 1956 aa17.1■□□□□ 0.33
CXCL12-207ENST00000488591 IGLV3-22A0A075B6J6 115 aa17.1■□□□□ 0.33
CXCL12-207ENST00000488591 TRIM43BA6NCK2 446 aa17.1■□□□□ 0.33
CXCL12-207ENST00000488591 H3BRB1 525 aa17.1■□□□□ 0.33
CXCL12-207ENST00000488591 F2P00734 622 aa17.1■□□□□ 0.33
CXCL12-207ENST00000488591 CD4P01730 458 aa17.1■□□□□ 0.33
CXCL12-207ENST00000488591 LGALS2P05162 132 aa17.1■□□□□ 0.33
CXCL12-207ENST00000488591 SAFBQ15424 915 aaKnown RBP eCLIP17.1■□□□□ 0.33
CXCL12-207ENST00000488591 UTP14CQ5TAP6 766 aaKnown RBP17.1■□□□□ 0.33
CXCL12-207ENST00000488591 CHRDL2Q6WN34 429 aa17.1■□□□□ 0.33
CXCL12-207ENST00000488591 TRIM43Q96BQ3 446 aaPredicted RBP17.1■□□□□ 0.33
CXCL12-207ENST00000488591 ZNF577Q9BSK1 485 aa17.1■□□□□ 0.33
CXCL12-207ENST00000488591 TUT1Q9H6E5 874 aaKnown RBP17.1■□□□□ 0.33
CXCL12-207ENST00000488591 TCEAL9Q9UHQ7 104 aa17.1■□□□□ 0.33
CXCL12-207ENST00000488591 ZNF215Q9UL58 517 aaPredicted RBP17.1■□□□□ 0.33
CXCL12-207ENST00000488591 NOD1Q9Y239 953 aa17.1■□□□□ 0.33
CXCL12-207ENST00000488591 KIF3AQ9Y496 699 aa17.1■□□□□ 0.33
CXCL12-207ENST00000488591 DOCK5Q9H7D0 1870 aa17.1■□□□□ 0.33
CXCL12-207ENST00000488591 IPO5O00410 1097 aaKnown RBP17.09■□□□□ 0.33
CXCL12-207ENST00000488591 B4GALT4O60513 344 aa17.09■□□□□ 0.33
CXCL12-207ENST00000488591 MMP1P03956 469 aa17.09■□□□□ 0.33
CXCL12-207ENST00000488591 TCF7P36402 384 aaPredicted RBP17.09■□□□□ 0.33
CXCL12-207ENST00000488591 MAGEA10P43363 369 aaPredicted RBP17.09■□□□□ 0.33
CXCL12-207ENST00000488591 FOSBP53539 338 aa17.09■□□□□ 0.33
CXCL12-207ENST00000488591 MDM2Q00987 491 aaPredicted RBP17.09■□□□□ 0.33
CXCL12-207ENST00000488591 KRT40Q6A162 431 aa17.09■□□□□ 0.33
CXCL12-207ENST00000488591 TMX3Q96JJ7 454 aa17.09■□□□□ 0.33
CXCL12-207ENST00000488591 C8orf76Q96K31 380 aa17.09■□□□□ 0.33
CXCL12-207ENST00000488591 NAP1L4Q99733 375 aaKnown RBP17.09■□□□□ 0.33
CXCL12-207ENST00000488591 C16orf70Q9BSU1 422 aa17.09■□□□□ 0.33
CXCL12-207ENST00000488591 TRPV6Q9H1D0 765 aa17.09■□□□□ 0.33
CXCL12-207ENST00000488591 TBC1D22BQ9NU19 505 aa17.09■□□□□ 0.33
CXCL12-207ENST00000488591 HAS3O00219 553 aa17.08■□□□□ 0.32
CXCL12-207ENST00000488591 TIMP1P01033 207 aa17.08■□□□□ 0.32
CXCL12-207ENST00000488591 ITGB3BPQ13352 177 aaPredicted RBP17.08■□□□□ 0.32
CXCL12-207ENST00000488591 INF2Q27J81 1249 aa17.08■□□□□ 0.32
CXCL12-207ENST00000488591 MOXD1Q6UVY6 613 aa17.08■□□□□ 0.32
CXCL12-207ENST00000488591 PIK3AP1Q6ZUJ8 805 aa17.08■□□□□ 0.32
CXCL12-207ENST00000488591 NEK8Q86SG6 692 aa17.08■□□□□ 0.32
CXCL12-207ENST00000488591 SESTD1Q86VW0 696 aa17.08■□□□□ 0.32
CXCL12-207ENST00000488591 OXER1Q8TDS5 423 aa17.08■□□□□ 0.32
CXCL12-207ENST00000488591 GDF15Q99988 308 aa17.08■□□□□ 0.32
CXCL12-207ENST00000488591 TBX21Q9UL17 535 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms