RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 SCN5AQ14524 2016 aa16.25■□□□□ 0.19
COL9A2-208ENST00000488463 EIF5BO60841 1220 aaKnown RBP16.25■□□□□ 0.19
COL9A2-208ENST00000488463 LARGE1O95461 756 aa16.25■□□□□ 0.19
COL9A2-208ENST00000488463 CYP2C9P11712 490 aa16.25■□□□□ 0.19
COL9A2-208ENST00000488463 HOXC8P31273 242 aa16.25■□□□□ 0.19
COL9A2-208ENST00000488463 PSEN2P49810 448 aa16.25■□□□□ 0.19
COL9A2-208ENST00000488463 FPGSQ05932 587 aa16.25■□□□□ 0.19
COL9A2-208ENST00000488463 JAKMIP3Q5VZ66 844 aa16.25■□□□□ 0.19
COL9A2-208ENST00000488463 GDF6Q6KF10 455 aaPredicted RBP16.25■□□□□ 0.19
COL9A2-208ENST00000488463 NLRX1Q86UT6 975 aa16.25■□□□□ 0.19
COL9A2-208ENST00000488463 MXRA8Q9BRK3 442 aa16.25■□□□□ 0.19
COL9A2-208ENST00000488463 HIPK3Q9H422 1215 aa16.25■□□□□ 0.19
COL9A2-208ENST00000488463 SH3GLB2Q9NR46 395 aa16.25■□□□□ 0.19
COL9A2-208ENST00000488463 VPS54Q9P1Q0 977 aa16.25■□□□□ 0.19
COL9A2-208ENST00000488463 TET1Q8NFU7 2136 aa16.25■□□□□ 0.19
COL9A2-208ENST00000488463 TANC1Q9C0D5 1861 aa16.25■□□□□ 0.19
COL9A2-208ENST00000488463 IGLV3-22A0A075B6J6 115 aa16.24■□□□□ 0.19
COL9A2-208ENST00000488463 MEIS1O00470 390 aa16.24■□□□□ 0.19
COL9A2-208ENST00000488463 MAFGO15525 162 aa16.24■□□□□ 0.19
COL9A2-208ENST00000488463 LGALS2P05162 132 aa16.24■□□□□ 0.19
COL9A2-208ENST00000488463 CYP3A4P08684 503 aa16.24■□□□□ 0.19
COL9A2-208ENST00000488463 CSF2RAP15509 400 aa16.24■□□□□ 0.19
COL9A2-208ENST00000488463 MTMR1Q13613 665 aa16.24■□□□□ 0.19
COL9A2-208ENST00000488463 MFSD10Q14728 455 aa16.24■□□□□ 0.19
COL9A2-208ENST00000488463 KIAA0753Q2KHM9 967 aa16.24■□□□□ 0.19
COL9A2-208ENST00000488463 CEP55Q53EZ4 464 aa16.24■□□□□ 0.19
COL9A2-208ENST00000488463 CCDC12Q8WUD4 166 aaPredicted RBP16.24■□□□□ 0.19
COL9A2-208ENST00000488463 CDHR1Q96JP9 859 aa16.24■□□□□ 0.19
COL9A2-208ENST00000488463 AIFM3Q96NN9 605 aa16.24■□□□□ 0.19
COL9A2-208ENST00000488463 KCNH7Q9NS40 1196 aa16.24■□□□□ 0.19
COL9A2-208ENST00000488463 HDAC6Q9UBN7 1215 aa16.24■□□□□ 0.19
COL9A2-208ENST00000488463 GTF2IRD1Q9UHL9 959 aa16.24■□□□□ 0.19
COL9A2-208ENST00000488463 FAM86B1E9PN63 330 aa16.23■□□□□ 0.19
COL9A2-208ENST00000488463 M0R2N6 131 aa16.23■□□□□ 0.19
COL9A2-208ENST00000488463 DTNBO60941 627 aa16.23■□□□□ 0.19
COL9A2-208ENST00000488463 DEXIO95424 95 aa16.23■□□□□ 0.19
COL9A2-208ENST00000488463 FAM86B2P0C5J1 330 aa16.23■□□□□ 0.19
COL9A2-208ENST00000488463 SUPT20HL2P0C7V6 817 aa16.23■□□□□ 0.19
COL9A2-208ENST00000488463 ARP10275 920 aa16.23■□□□□ 0.19
COL9A2-208ENST00000488463 ARHGAP4P98171 946 aa16.23■□□□□ 0.19
COL9A2-208ENST00000488463 AKAP17AQ02040 695 aaKnown RBP16.23■□□□□ 0.19
COL9A2-208ENST00000488463 SSRP1Q08945 709 aaKnown RBP16.23■□□□□ 0.19
COL9A2-208ENST00000488463 ITGB3BPQ13352 177 aaPredicted RBP16.23■□□□□ 0.19
COL9A2-208ENST00000488463 ME3Q16798 604 aa16.23■□□□□ 0.19
COL9A2-208ENST00000488463 FAM47CQ5HY64 1035 aa16.23■□□□□ 0.19
COL9A2-208ENST00000488463 RASIP1Q5U651 963 aa16.23■□□□□ 0.19
COL9A2-208ENST00000488463 REXO1Q8N1G1 1221 aaKnown RBP16.23■□□□□ 0.19
COL9A2-208ENST00000488463 RASGRP4Q8TDF6 673 aa16.23■□□□□ 0.19
COL9A2-208ENST00000488463 DHX38Q92620 1227 aaKnown RBP16.23■□□□□ 0.19
COL9A2-208ENST00000488463 EHMT1Q9H9B1 1298 aa16.23■□□□□ 0.19
COL9A2-208ENST00000488463 C6orf50Q9HD87 102 aa16.23■□□□□ 0.19
COL9A2-208ENST00000488463 TRANK1O15050 2925 aa16.23■□□□□ 0.19
COL9A2-208ENST00000488463 GSTTP1A0A1W2PQM5 241 aa16.22■□□□□ 0.19
COL9A2-208ENST00000488463 CPLX1O14810 134 aa16.22■□□□□ 0.19
COL9A2-208ENST00000488463 GNA11P29992 359 aa16.22■□□□□ 0.19
COL9A2-208ENST00000488463 NEK4P51957 841 aa16.22■□□□□ 0.19
COL9A2-208ENST00000488463 ST3GAL1Q11201 340 aa16.22■□□□□ 0.19
COL9A2-208ENST00000488463 ANKRD1Q15327 319 aa16.22■□□□□ 0.19
COL9A2-208ENST00000488463 TMEM240Q5SV17 173 aa16.22■□□□□ 0.19
COL9A2-208ENST00000488463 NIPA1Q7RTP0 329 aa16.22■□□□□ 0.19
COL9A2-208ENST00000488463 TRIM50Q86XT4 487 aa16.22■□□□□ 0.19
COL9A2-208ENST00000488463 TRIM22Q8IYM9 498 aa16.22■□□□□ 0.19
COL9A2-208ENST00000488463 GIMAP8Q8ND71 665 aaPredicted RBP16.22■□□□□ 0.19
COL9A2-208ENST00000488463 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.22■□□□□ 0.192e-7■□□□□ 9.6
COL9A2-208ENST00000488463 ALG1Q9BT22 464 aa16.22■□□□□ 0.19
COL9A2-208ENST00000488463 KATNAL1Q9BW62 490 aa16.22■□□□□ 0.19
COL9A2-208ENST00000488463 SLKQ9H2G2 1235 aaPredicted RBP16.22■□□□□ 0.19
COL9A2-208ENST00000488463 STK36Q9NRP7 1315 aa16.21■□□□□ 0.19
COL9A2-208ENST00000488463 H3BRB1 525 aa16.21■□□□□ 0.19
COL9A2-208ENST00000488463 FDPSP14324 419 aaKnown RBP16.21■□□□□ 0.19
COL9A2-208ENST00000488463 CCL23P55773 120 aa16.21■□□□□ 0.19
COL9A2-208ENST00000488463 ZNF200P98182 395 aaPredicted RBP16.21■□□□□ 0.19
COL9A2-208ENST00000488463 RBL2Q08999 1139 aa16.21■□□□□ 0.19
COL9A2-208ENST00000488463 PPIGQ13427 754 aaKnown RBP eCLIP16.21■□□□□ 0.192e-11■■■□□ 18
COL9A2-208ENST00000488463 PTGISQ16647 500 aa16.21■□□□□ 0.19
COL9A2-208ENST00000488463 TRIM71Q2Q1W2 868 aaKnown RBP16.21■□□□□ 0.19
COL9A2-208ENST00000488463 MCTP2Q6DN12 878 aa16.21■□□□□ 0.19
COL9A2-208ENST00000488463 TMEM199Q8N511 208 aa16.21■□□□□ 0.19
COL9A2-208ENST00000488463 DAGLBQ8NCG7 672 aa16.21■□□□□ 0.19
COL9A2-208ENST00000488463 CCDC148Q8NFR7 591 aa16.21■□□□□ 0.19
COL9A2-208ENST00000488463 WNT8BQ93098 351 aa16.21■□□□□ 0.19
COL9A2-208ENST00000488463 GTF3C6Q969F1 213 aa16.21■□□□□ 0.19
COL9A2-208ENST00000488463 LENG9Q96B70 501 aa16.21■□□□□ 0.19
COL9A2-208ENST00000488463 TUT1Q9H6E5 874 aaKnown RBP16.21■□□□□ 0.19
COL9A2-208ENST00000488463 AGO4Q9HCK5 861 aaKnown RBP16.21■□□□□ 0.19
COL9A2-208ENST00000488463 IL23AQ9NPF7 189 aa16.21■□□□□ 0.19
COL9A2-208ENST00000488463 NFASCO94856 1347 aa16.2■□□□□ 0.18
COL9A2-208ENST00000488463 PITPNM1O00562 1244 aa16.2■□□□□ 0.18
COL9A2-208ENST00000488463 NOP56O00567 594 aaKnown RBP16.2■□□□□ 0.18
COL9A2-208ENST00000488463 DHX15O43143 795 aaKnown RBP16.2■□□□□ 0.18
COL9A2-208ENST00000488463 ACRP10323 421 aa16.2■□□□□ 0.18
COL9A2-208ENST00000488463 CIITAP33076 1130 aa16.2■□□□□ 0.18
COL9A2-208ENST00000488463 CHMP4BP1P59074 171 aa16.2■□□□□ 0.18
COL9A2-208ENST00000488463 GPNMBQ14956 572 aa16.2■□□□□ 0.18
COL9A2-208ENST00000488463 GPR153Q6NV75 609 aa16.2■□□□□ 0.18
COL9A2-208ENST00000488463 TRAF7Q6Q0C0 670 aa16.2■□□□□ 0.18
COL9A2-208ENST00000488463 FAM177A1Q8N128 213 aaPredicted RBP16.2■□□□□ 0.18
COL9A2-208ENST00000488463 C7orf31Q8N865 590 aa16.2■□□□□ 0.18
COL9A2-208ENST00000488463 NECAB1Q8N987 351 aa16.2■□□□□ 0.18
COL9A2-208ENST00000488463 BICD2Q8TD16 824 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms