RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 SENP7Q9BQF6 1050 aa27.13■■□□□ 1.93
RNF38-208ENST00000488058 RNF26Q9BY78 433 aaPredicted RBP27.13■■□□□ 1.93
RNF38-208ENST00000488058 GTF2IRD1Q9UHL9 959 aa27.13■■□□□ 1.93
RNF38-208ENST00000488058 CPLX1O14810 134 aa27.12■■□□□ 1.93
RNF38-208ENST00000488058 ATP9AO75110 1047 aa27.12■■□□□ 1.93
RNF38-208ENST00000488058 IFNAR1P17181 557 aa27.12■■□□□ 1.93
RNF38-208ENST00000488058 AP3B2Q13367 1082 aa27.12■■□□□ 1.93
RNF38-208ENST00000488058 GIMAP8Q8ND71 665 aaPredicted RBP27.12■■□□□ 1.93
RNF38-208ENST00000488058 GPR20Q99678 358 aa27.12■■□□□ 1.93
RNF38-208ENST00000488058 C16orf70Q9BSU1 422 aa27.12■■□□□ 1.93
RNF38-208ENST00000488058 C6orf50Q9HD87 102 aa27.12■■□□□ 1.93
RNF38-208ENST00000488058 JADE2Q9NQC1 790 aa27.12■■□□□ 1.93
RNF38-208ENST00000488058 TELO2Q9Y4R8 837 aa27.12■■□□□ 1.93
RNF38-208ENST00000488058 SCN5AQ14524 2016 aa27.11■■□□□ 1.93
RNF38-208ENST00000488058 FGBP02675 491 aa27.11■■□□□ 1.93
RNF38-208ENST00000488058 BFSP2Q13515 415 aa27.11■■□□□ 1.93
RNF38-208ENST00000488058 DEFB128Q7Z7B8 93 aa27.11■■□□□ 1.93
RNF38-208ENST00000488058 TEX2Q8IWB9 1127 aa27.11■■□□□ 1.93
RNF38-208ENST00000488058 RPUSD2Q8IZ73 545 aaKnown RBP27.11■■□□□ 1.93
RNF38-208ENST00000488058 CCDC155Q8N6L0 562 aa27.11■■□□□ 1.93
RNF38-208ENST00000488058 ZNF274Q96GC6 653 aaPredicted RBP27.11■■□□□ 1.93
RNF38-208ENST00000488058 TANC1Q9C0D5 1861 aa27.1■■□□□ 1.93
RNF38-208ENST00000488058 H3BRB1 525 aa27.1■■□□□ 1.93
RNF38-208ENST00000488058 KCNA2P16389 499 aa27.1■■□□□ 1.93
RNF38-208ENST00000488058 CLK2P49760 499 aaKnown RBP27.1■■□□□ 1.93
RNF38-208ENST00000488058 TRIM22Q8IYM9 498 aa27.1■■□□□ 1.93
RNF38-208ENST00000488058 MXRA8Q9BRK3 442 aa27.1■■□□□ 1.93
RNF38-208ENST00000488058 TUT1Q9H6E5 874 aaKnown RBP27.1■■□□□ 1.93
RNF38-208ENST00000488058 ESYT2A0FGR8 921 aa27.09■■□□□ 1.93
RNF38-208ENST00000488058 ZNF76P36508 570 aa27.09■■□□□ 1.93
RNF38-208ENST00000488058 ANAPC15P60006 121 aa27.09■■□□□ 1.93
RNF38-208ENST00000488058 SMAD3P84022 425 aaKnown RBP27.09■■□□□ 1.93
RNF38-208ENST00000488058 SSRP1Q08945 709 aaKnown RBP27.09■■□□□ 1.93
RNF38-208ENST00000488058 OTOP2Q7RTS6 562 aa27.09■■□□□ 1.93
RNF38-208ENST00000488058 TRIM50Q86XT4 487 aa27.09■■□□□ 1.93
RNF38-208ENST00000488058 CCDC148Q8NFR7 591 aa27.09■■□□□ 1.93
RNF38-208ENST00000488058 FAM161BQ96MY7 647 aa27.09■■□□□ 1.93
RNF38-208ENST00000488058 ZMYND12Q9H0C1 365 aa27.09■■□□□ 1.93
RNF38-208ENST00000488058 VPS54Q9P1Q0 977 aa27.09■■□□□ 1.93
RNF38-208ENST00000488058 TRIP12Q14669 1992 aaPredicted RBP27.09■■□□□ 1.93
RNF38-208ENST00000488058 PITPNM1O00562 1244 aa27.08■■□□□ 1.93
RNF38-208ENST00000488058 ADAMTS3O15072 1205 aa27.08■■□□□ 1.93
RNF38-208ENST00000488058 EIF5BO60841 1220 aaKnown RBP27.08■■□□□ 1.93
RNF38-208ENST00000488058 SREBF1P36956 1147 aa27.08■■□□□ 1.93
RNF38-208ENST00000488058 ZNF200P98182 395 aaPredicted RBP27.08■■□□□ 1.93
RNF38-208ENST00000488058 ZNF697Q5TEC3 545 aa27.08■■□□□ 1.93
RNF38-208ENST00000488058 CPLX2Q6PUV4 134 aaKnown RBP27.08■■□□□ 1.93
RNF38-208ENST00000488058 REXO1Q8N1G1 1221 aaKnown RBP27.08■■□□□ 1.93
RNF38-208ENST00000488058 CYP2W1Q8TAV3 490 aa27.08■■□□□ 1.93
RNF38-208ENST00000488058 CTAGE1Q96RT6 745 aa27.08■■□□□ 1.93
RNF38-208ENST00000488058 MTIF3Q9H2K0 278 aaKnown RBP27.08■■□□□ 1.93
RNF38-208ENST00000488058 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.07■■□□□ 1.92
RNF38-208ENST00000488058 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.07■■□□□ 1.92
RNF38-208ENST00000488058 IQCF3P0C7M6 154 aa27.07■■□□□ 1.92
RNF38-208ENST00000488058 GNA11P29992 359 aa27.07■■□□□ 1.92
RNF38-208ENST00000488058 TCF7P36402 384 aaPredicted RBP27.07■■□□□ 1.92
RNF38-208ENST00000488058 ARHGAP4P98171 946 aa27.07■■□□□ 1.92
RNF38-208ENST00000488058 CAGE1Q8TC20 777 aa27.07■■□□□ 1.92
RNF38-208ENST00000488058 DHX38Q92620 1227 aaKnown RBP27.07■■□□□ 1.92
RNF38-208ENST00000488058 KCNH7Q9NS40 1196 aa27.07■■□□□ 1.92
RNF38-208ENST00000488058 ZNF215Q9UL58 517 aaPredicted RBP27.07■■□□□ 1.92
RNF38-208ENST00000488058 LAMA3Q16787 3333 aa27.07■■□□□ 1.92
RNF38-208ENST00000488058 C17orf102A2RUQ5 167 aa27.06■■□□□ 1.92
RNF38-208ENST00000488058 ZBBXA8MT70 800 aa27.06■■□□□ 1.92
RNF38-208ENST00000488058 MAFGO15525 162 aa27.06■■□□□ 1.92
RNF38-208ENST00000488058 SMIM10L2AP0DMW4 78 aa27.06■■□□□ 1.92
RNF38-208ENST00000488058 SMIM10L2BP0DMW5 78 aa27.06■■□□□ 1.92
RNF38-208ENST00000488058 CEP55Q53EZ4 464 aa27.06■■□□□ 1.92
RNF38-208ENST00000488058 RASGRP4Q8TDF6 673 aa27.06■■□□□ 1.92
RNF38-208ENST00000488058 HERVK_113Q902F9 699 aa27.06■■□□□ 1.92
RNF38-208ENST00000488058 SEC24BO95487 1268 aa27.05■■□□□ 1.92
RNF38-208ENST00000488058 ARP10275 920 aa27.05■■□□□ 1.92
RNF38-208ENST00000488058 NLRP5P59047 1200 aa27.05■■□□□ 1.92
RNF38-208ENST00000488058 PTK7Q13308 1070 aa27.05■■□□□ 1.92
RNF38-208ENST00000488058 HIC1Q14526 733 aa27.05■■□□□ 1.92
RNF38-208ENST00000488058 FAM109BQ6ICB4 259 aaPredicted RBP27.05■■□□□ 1.92
RNF38-208ENST00000488058 AFAP1L1Q8TED9 768 aa27.05■■□□□ 1.92
RNF38-208ENST00000488058 SEPT1Q8WYJ6 367 aa27.05■■□□□ 1.92
RNF38-208ENST00000488058 SDF4Q9BRK5 362 aa27.05■■□□□ 1.92
RNF38-208ENST00000488058 FTOQ9C0B1 505 aaKnown RBP eCLIP27.05■■□□□ 1.92
RNF38-208ENST00000488058 SLKQ9H2G2 1235 aaPredicted RBP27.05■■□□□ 1.92
RNF38-208ENST00000488058 CXXC1Q9P0U4 656 aaPredicted RBP27.05■■□□□ 1.92
RNF38-208ENST00000488058 GRXCR1A8MXD5 290 aa27.04■■□□□ 1.92
RNF38-208ENST00000488058 PFKMP08237 780 aa27.04■■□□□ 1.92
RNF38-208ENST00000488058 RFC2P35250 354 aa27.04■■□□□ 1.92
RNF38-208ENST00000488058 RASIP1Q5U651 963 aa27.04■■□□□ 1.92
RNF38-208ENST00000488058 MCTP2Q6DN12 878 aa27.04■■□□□ 1.92
RNF38-208ENST00000488058 LRRC8DQ7L1W4 858 aa27.04■■□□□ 1.92
RNF38-208ENST00000488058 BICD2Q8TD16 824 aa27.04■■□□□ 1.92
RNF38-208ENST00000488058 JPH1Q9HDC5 661 aaPredicted RBP27.04■■□□□ 1.92
RNF38-208ENST00000488058 MTMR10Q9NXD2 777 aa27.04■■□□□ 1.92
RNF38-208ENST00000488058 GSTTP1A0A1W2PQM5 241 aa27.03■■□□□ 1.92
RNF38-208ENST00000488058 DEXIO95424 95 aa27.03■■□□□ 1.92
RNF38-208ENST00000488058 SELPP16109 830 aa27.03■■□□□ 1.92
RNF38-208ENST00000488058 AK2P54819 239 aa27.03■■□□□ 1.92
RNF38-208ENST00000488058 ATP6V0A1Q93050 837 aa27.03■■□□□ 1.92
RNF38-208ENST00000488058 VWCEQ96DN2 955 aa27.03■■□□□ 1.92
RNF38-208ENST00000488058 SLC9A2Q9UBY0 812 aa27.03■■□□□ 1.92
RNF38-208ENST00000488058 TPCN1Q9ULQ1 816 aa27.03■■□□□ 1.92
RNF38-208ENST00000488058 SZT2Q5T011 3432 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms