RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 FASTKD5Q7L8L6 764 aaKnown RBP10.56□□□□□ -0.72
SF3B1-211ENST00000487698 ADSSL1Q8N142 457 aa10.56□□□□□ -0.72
SF3B1-211ENST00000487698 HSD17B14Q9BPX1 270 aa10.56□□□□□ -0.72
SF3B1-211ENST00000487698 EIF2AK1Q9BQI3 630 aaKnown RBP10.56□□□□□ -0.72
SF3B1-211ENST00000487698 NFE2L3Q9Y4A8 694 aa10.56□□□□□ -0.72
SF3B1-211ENST00000487698 ZNFX1Q9P2E3 1918 aaKnown RBP10.56□□□□□ -0.72
SF3B1-211ENST00000487698 PEX10O60683 326 aa10.55□□□□□ -0.72
SF3B1-211ENST00000487698 PRCPP42785 496 aa10.55□□□□□ -0.72
SF3B1-211ENST00000487698 ITGB3BPQ13352 177 aaPredicted RBP10.55□□□□□ -0.72
SF3B1-211ENST00000487698 SNAPC2Q13487 334 aa10.55□□□□□ -0.72
SF3B1-211ENST00000487698 DHX8Q14562 1220 aaKnown RBP10.55□□□□□ -0.72
SF3B1-211ENST00000487698 ARHGEF16Q5VV41 709 aa10.55□□□□□ -0.72
SF3B1-211ENST00000487698 SPATA1Q5VX52 437 aa10.55□□□□□ -0.72
SF3B1-211ENST00000487698 UNC13DQ70J99 1090 aa10.55□□□□□ -0.72
SF3B1-211ENST00000487698 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.55□□□□□ -0.72
SF3B1-211ENST00000487698 VSIG10LQ86VR7 867 aa10.55□□□□□ -0.72
SF3B1-211ENST00000487698 DDX12PQ92771 950 aa10.55□□□□□ -0.72
SF3B1-211ENST00000487698 DNAJC19Q96DA6 116 aa10.55□□□□□ -0.72
SF3B1-211ENST00000487698 TEKT3Q9BXF9 490 aa10.55□□□□□ -0.72
SF3B1-211ENST00000487698 GTPBP4Q9BZE4 634 aaKnown RBP10.55□□□□□ -0.72
SF3B1-211ENST00000487698 SPATC1LQ9H0A9 340 aa10.55□□□□□ -0.72
SF3B1-211ENST00000487698 UNC45AQ9H3U1 944 aa10.55□□□□□ -0.72
SF3B1-211ENST00000487698 ZNF408Q9H9D4 720 aa10.55□□□□□ -0.72
SF3B1-211ENST00000487698 AGO4Q9HCK5 861 aaKnown RBP10.55□□□□□ -0.72
SF3B1-211ENST00000487698 TUFT1Q9NNX1 390 aa10.55□□□□□ -0.72
SF3B1-211ENST00000487698 FBXO40Q9UH90 709 aa10.55□□□□□ -0.72
SF3B1-211ENST00000487698 RWDD2AQ9UIY3 292 aa10.55□□□□□ -0.72
SF3B1-211ENST00000487698 PFASO15067 1338 aa10.55□□□□□ -0.72
SF3B1-211ENST00000487698 NR3C2P08235 984 aa10.55□□□□□ -0.72
SF3B1-211ENST00000487698 PLA2G4BP0C869 781 aa10.55□□□□□ -0.72
SF3B1-211ENST00000487698 MUTP22033 750 aa10.55□□□□□ -0.72
SF3B1-211ENST00000487698 CCND2P30279 289 aa10.55□□□□□ -0.72
SF3B1-211ENST00000487698 SLC12A3P55017 1021 aa10.55□□□□□ -0.72
SF3B1-211ENST00000487698 PDE4DQ08499 809 aa10.55□□□□□ -0.72
SF3B1-211ENST00000487698 PAK1Q13153 545 aa10.55□□□□□ -0.72
SF3B1-211ENST00000487698 PABPC4Q13310 644 aaKnown RBP eCLIP10.55□□□□□ -0.72
SF3B1-211ENST00000487698 MTMR1Q13613 665 aa10.55□□□□□ -0.72
SF3B1-211ENST00000487698 KLHL10Q6JEL2 608 aa10.55□□□□□ -0.72
SF3B1-211ENST00000487698 NSUN6Q8TEA1 469 aaKnown RBP10.55□□□□□ -0.72
SF3B1-211ENST00000487698 CCDC47Q96A33 483 aaKnown RBP10.55□□□□□ -0.72
SF3B1-211ENST00000487698 SLC10A4Q96EP9 437 aa10.55□□□□□ -0.72
SF3B1-211ENST00000487698 INPP4AQ96PE3 977 aaPredicted RBP10.55□□□□□ -0.72
SF3B1-211ENST00000487698 EXOC1Q9NV70 894 aa10.55□□□□□ -0.72
SF3B1-211ENST00000487698 CTNND2Q9UQB3 1225 aa10.55□□□□□ -0.72
SF3B1-211ENST00000487698 ASTN1O14525 1302 aa10.54□□□□□ -0.72
SF3B1-211ENST00000487698 MYCLP12524 364 aaPredicted RBP10.54□□□□□ -0.72
SF3B1-211ENST00000487698 CYP11B2P19099 503 aa10.54□□□□□ -0.72
SF3B1-211ENST00000487698 PSMC6P62333 389 aa10.54□□□□□ -0.72
SF3B1-211ENST00000487698 FANCCQ00597 558 aa10.54□□□□□ -0.72
SF3B1-211ENST00000487698 CYP4A11Q02928 519 aa10.54□□□□□ -0.72
SF3B1-211ENST00000487698 STK4Q13043 487 aa10.54□□□□□ -0.72
SF3B1-211ENST00000487698 EPHA7Q15375 998 aa10.54□□□□□ -0.72
SF3B1-211ENST00000487698 CDKAL1Q5VV42 579 aa10.54□□□□□ -0.72
SF3B1-211ENST00000487698 DYMQ7RTS9 669 aa10.54□□□□□ -0.72
SF3B1-211ENST00000487698 GPRASP2Q96D09 838 aa10.54□□□□□ -0.72
SF3B1-211ENST00000487698 GBA2Q9HCG7 927 aaPredicted RBP10.54□□□□□ -0.72
SF3B1-211ENST00000487698 RGL1Q9NZL6 768 aa10.54□□□□□ -0.72
SF3B1-211ENST00000487698 MYH11P35749 1972 aa10.54□□□□□ -0.72
SF3B1-211ENST00000487698 CHMP2AO43633 222 aa10.54□□□□□ -0.72
SF3B1-211ENST00000487698 RGS20O76081 388 aa10.54□□□□□ -0.72
SF3B1-211ENST00000487698 SLITRK3O94933 977 aa10.54□□□□□ -0.72
SF3B1-211ENST00000487698 FCER1AP12319 257 aa10.54□□□□□ -0.72
SF3B1-211ENST00000487698 STX17P56962 302 aa10.54□□□□□ -0.72
SF3B1-211ENST00000487698 GPBP1Q86WP2 473 aa10.54□□□□□ -0.72
SF3B1-211ENST00000487698 SYT2Q8N9I0 419 aaPredicted RBP10.54□□□□□ -0.72
SF3B1-211ENST00000487698 KIAA0895Q8NCT3 520 aa10.54□□□□□ -0.72
SF3B1-211ENST00000487698 DNERQ8NFT8 737 aa10.54□□□□□ -0.72
SF3B1-211ENST00000487698 NELFBQ8WX92 580 aa10.54□□□□□ -0.72
SF3B1-211ENST00000487698 MS4A4AQ96JQ5 239 aa10.54□□□□□ -0.72
SF3B1-211ENST00000487698 MOV10L1Q9BXT6 1211 aaKnown RBP10.54□□□□□ -0.72
SF3B1-211ENST00000487698 XPO4Q9C0E2 1151 aaKnown RBP10.54□□□□□ -0.72
SF3B1-211ENST00000487698 TXNRD2Q9NNW7 524 aa10.54□□□□□ -0.72
SF3B1-211ENST00000487698 NMRK2Q9NPI5 230 aa10.54□□□□□ -0.72
SF3B1-211ENST00000487698 SAMSN1Q9NSI8 373 aaKnown RBP10.54□□□□□ -0.72
SF3B1-211ENST00000487698 TBC1D22BQ9NU19 505 aa10.54□□□□□ -0.72
SF3B1-211ENST00000487698 IFNKQ9P0W0 207 aa10.54□□□□□ -0.72
SF3B1-211ENST00000487698 RBPJLQ9UBG7 517 aa10.54□□□□□ -0.72
SF3B1-211ENST00000487698 DNM3Q9UQ16 869 aa10.54□□□□□ -0.72
SF3B1-211ENST00000487698 FRMD3A2A2Y4 597 aa10.53□□□□□ -0.72
SF3B1-211ENST00000487698 STAM2O75886 525 aa10.53□□□□□ -0.72
SF3B1-211ENST00000487698 EYA4O95677 639 aa10.53□□□□□ -0.72
SF3B1-211ENST00000487698 PTMAP06454 111 aaKnown RBP10.53□□□□□ -0.72
SF3B1-211ENST00000487698 OSBPP22059 807 aa10.53□□□□□ -0.72
SF3B1-211ENST00000487698 PPP1R2P41236 205 aa10.53□□□□□ -0.72
SF3B1-211ENST00000487698 ARSHQ5FYA8 562 aa10.53□□□□□ -0.72
SF3B1-211ENST00000487698 SPC24Q8NBT2 197 aa10.53□□□□□ -0.72
SF3B1-211ENST00000487698 NEK9Q8TD19 979 aa10.53□□□□□ -0.72
SF3B1-211ENST00000487698 DYDC2Q96IM9 177 aa10.53□□□□□ -0.72
SF3B1-211ENST00000487698 PAGR1Q9BTK6 254 aa10.53□□□□□ -0.72
SF3B1-211ENST00000487698 MAPK8IP1Q9UQF2 711 aa10.53□□□□□ -0.72
SF3B1-211ENST00000487698 SLC45A1Q9Y2W3 748 aa10.53□□□□□ -0.72
SF3B1-211ENST00000487698 PLXNB2O15031 1838 aa10.53□□□□□ -0.72
SF3B1-211ENST00000487698 ARID2Q68CP9 1835 aa10.53□□□□□ -0.72
SF3B1-211ENST00000487698 TESPA1A2RU30 521 aaPredicted RBP10.52□□□□□ -0.72
SF3B1-211ENST00000487698 PSMA7O14818 248 aa10.52□□□□□ -0.72
SF3B1-211ENST00000487698 MAFGO15525 162 aa10.52□□□□□ -0.72
SF3B1-211ENST00000487698 SLC25A27O95847 323 aa10.52□□□□□ -0.72
SF3B1-211ENST00000487698 COPB2P35606 906 aa10.52□□□□□ -0.72
SF3B1-211ENST00000487698 COASYQ13057 564 aa10.52□□□□□ -0.72
SF3B1-211ENST00000487698 PSMD2Q13200 908 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms