RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 UNCXA6NJT0 531 aa6.16□□□□□ -1.42
UBR3-211ENST00000487689 LAMTOR5O43504 91 aa6.16□□□□□ -1.42
UBR3-211ENST00000487689 TESK1Q15569 626 aa6.16□□□□□ -1.42
UBR3-211ENST00000487689 ZSWIM3Q96MP5 696 aa6.16□□□□□ -1.42
UBR3-211ENST00000487689 BARX1Q9HBU1 254 aaPredicted RBP6.16□□□□□ -1.42
UBR3-211ENST00000487689 NPEPPSL1A6NEC2 478 aa6.15□□□□□ -1.42
UBR3-211ENST00000487689 TCF3P15923 654 aa6.15□□□□□ -1.42
UBR3-211ENST00000487689 IL13P35225 146 aa6.15□□□□□ -1.42
UBR3-211ENST00000487689 ETFBP38117 255 aa6.15□□□□□ -1.42
UBR3-211ENST00000487689 MAP4K2Q12851 820 aa6.15□□□□□ -1.42
UBR3-211ENST00000487689 HSP90AA2PQ14568 343 aaPredicted RBP6.15□□□□□ -1.42
UBR3-211ENST00000487689 CR1LQ2VPA4 569 aa6.15□□□□□ -1.42
UBR3-211ENST00000487689 EMC4Q5J8M3 183 aa6.15□□□□□ -1.42
UBR3-211ENST00000487689 CYP4F22Q6NT55 531 aa6.15□□□□□ -1.42
UBR3-211ENST00000487689 TEPPQ6URK8 271 aa6.15□□□□□ -1.42
UBR3-211ENST00000487689 ARHGEF18Q6ZSZ5 1173 aa6.15□□□□□ -1.42
UBR3-211ENST00000487689 USP53Q70EK8 1073 aa6.15□□□□□ -1.42
UBR3-211ENST00000487689 DPH6Q7L8W6 267 aa6.15□□□□□ -1.42
UBR3-211ENST00000487689 KREMEN2Q8NCW0 462 aa6.15□□□□□ -1.42
UBR3-211ENST00000487689 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.15□□□□□ -1.42
UBR3-211ENST00000487689 SYT3Q9BQG1 590 aa6.15□□□□□ -1.42
UBR3-211ENST00000487689 HS3ST3A1Q9Y663 406 aa6.15□□□□□ -1.42
UBR3-211ENST00000487689 TCRBV5S2A0A599 114 aa6.14□□□□□ -1.43
UBR3-211ENST00000487689 GJB6O95452 261 aa6.14□□□□□ -1.43
UBR3-211ENST00000487689 AMHP03971 560 aa6.14□□□□□ -1.43
UBR3-211ENST00000487689 DNAJA1P31689 397 aaKnown RBP6.14□□□□□ -1.43
UBR3-211ENST00000487689 SPIRE1Q08AE8 756 aa6.14□□□□□ -1.43
UBR3-211ENST00000487689 KLF10Q13118 480 aa6.14□□□□□ -1.43
UBR3-211ENST00000487689 SF1Q15637 639 aaKnown RBP6.14□□□□□ -1.43
UBR3-211ENST00000487689 VASNQ6EMK4 673 aa6.14□□□□□ -1.43
UBR3-211ENST00000487689 TRMT10BQ6PF06 316 aaKnown RBP6.14□□□□□ -1.43
UBR3-211ENST00000487689 ARRDC4Q8NCT1 418 aa6.14□□□□□ -1.43
UBR3-211ENST00000487689 CDK5RAP1Q96SZ6 601 aaKnown RBP6.14□□□□□ -1.43
UBR3-211ENST00000487689 GPR27Q9NS67 375 aa6.14□□□□□ -1.43
UBR3-211ENST00000487689 CCDC9Q9Y3X0 531 aaKnown RBP6.14□□□□□ -1.43
UBR3-211ENST00000487689 TADA3O75528 432 aa6.13□□□□□ -1.43
UBR3-211ENST00000487689 FBXO21O94952 628 aa6.13□□□□□ -1.43
UBR3-211ENST00000487689 LCP1P13796 627 aa6.13□□□□□ -1.43
UBR3-211ENST00000487689 ZNF28P17035 718 aa6.13□□□□□ -1.43
UBR3-211ENST00000487689 PPP2R2AP63151 447 aa6.13□□□□□ -1.43
UBR3-211ENST00000487689 CYP4F3Q08477 520 aa6.13□□□□□ -1.43
UBR3-211ENST00000487689 ADAM9Q13443 819 aa6.13□□□□□ -1.43
UBR3-211ENST00000487689 SLC10A6Q3KNW5 377 aa6.13□□□□□ -1.43
UBR3-211ENST00000487689 RSPO2Q6UXX9 243 aaPredicted RBP6.13□□□□□ -1.43
UBR3-211ENST00000487689 IER2Q9BTL4 223 aa6.13□□□□□ -1.43
UBR3-211ENST00000487689 KLC2Q9H0B6 622 aa6.13□□□□□ -1.43
UBR3-211ENST00000487689 ZNF408Q9H9D4 720 aa6.13□□□□□ -1.43
UBR3-211ENST00000487689 ST7Q9NRC1 585 aa6.13□□□□□ -1.43
UBR3-211ENST00000487689 ING1Q9UK53 422 aaPredicted RBP6.13□□□□□ -1.43
UBR3-211ENST00000487689 ZDHHC9Q9Y397 364 aa6.13□□□□□ -1.43
UBR3-211ENST00000487689 GNAT1P11488 350 aa6.12□□□□□ -1.43
UBR3-211ENST00000487689 TGM1P22735 817 aa6.12□□□□□ -1.43
UBR3-211ENST00000487689 ICAM4Q14773 271 aa6.12□□□□□ -1.43
UBR3-211ENST00000487689 KIZQ2M2Z5 673 aa6.12□□□□□ -1.43
UBR3-211ENST00000487689 PRR31Q5SQ13 230 aa6.12□□□□□ -1.43
UBR3-211ENST00000487689 SLC35F1Q5T1Q4 408 aa6.12□□□□□ -1.43
UBR3-211ENST00000487689 TMC5Q6UXY8 1006 aa6.12□□□□□ -1.43
UBR3-211ENST00000487689 CIR1Q86X95 450 aaPredicted RBP6.12□□□□□ -1.43
UBR3-211ENST00000487689 KLHL36Q8N4N3 616 aa6.12□□□□□ -1.43
UBR3-211ENST00000487689 SGSM3Q96HU1 749 aa6.12□□□□□ -1.43
UBR3-211ENST00000487689 PHF20Q9BVI0 1012 aa6.12□□□□□ -1.43
UBR3-211ENST00000487689 DEF6Q9H4E7 631 aa6.12□□□□□ -1.43
UBR3-211ENST00000487689 SLC6A20Q9NP91 592 aa6.12□□□□□ -1.43
UBR3-211ENST00000487689 FBXL7Q9UJT9 491 aa6.12□□□□□ -1.43
UBR3-211ENST00000487689 UNC13AQ9UPW8 1703 aa6.11□□□□□ -1.43
UBR3-211ENST00000487689 APPP05067 770 aa6.11□□□□□ -1.43
UBR3-211ENST00000487689 ZNF568Q3ZCX4 644 aa6.11□□□□□ -1.43
UBR3-211ENST00000487689 MRM1Q6IN84 353 aaKnown RBP6.11□□□□□ -1.43
UBR3-211ENST00000487689 EP400NLQ6ZTU2 488 aa6.11□□□□□ -1.43
UBR3-211ENST00000487689 KBTBD2Q8IY47 623 aa6.11□□□□□ -1.43
UBR3-211ENST00000487689 PIP4K2CQ8TBX8 421 aa6.11□□□□□ -1.43
UBR3-211ENST00000487689 MICAL1Q8TDZ2 1067 aa6.11□□□□□ -1.43
UBR3-211ENST00000487689 DCAF4Q8WV16 495 aa6.11□□□□□ -1.43
UBR3-211ENST00000487689 YTHDC1Q96MU7 727 aaKnown RBP6.11□□□□□ -1.43
UBR3-211ENST00000487689 AARSD1Q9BTE6 412 aaKnown RBP6.11□□□□□ -1.43
UBR3-211ENST00000487689 ASH2LQ9UBL3 628 aa6.11□□□□□ -1.43
UBR3-211ENST00000487689 NPFFR2Q9Y5X5 522 aa6.11□□□□□ -1.43
UBR3-211ENST00000487689 EIF4G1Q04637 1599 aaKnown RBP6.1□□□□□ -1.43
UBR3-211ENST00000487689 A0A1W2PQU0 124 aa6.1□□□□□ -1.43
UBR3-211ENST00000487689 U2SURPO15042 1029 aaKnown RBP6.1□□□□□ -1.43
UBR3-211ENST00000487689 LRG1P02750 347 aa6.1□□□□□ -1.43
UBR3-211ENST00000487689 PPP2CBP62714 309 aa6.1□□□□□ -1.43
UBR3-211ENST00000487689 PPP2CAP67775 309 aa6.1□□□□□ -1.43
UBR3-211ENST00000487689 ANKS3Q6ZW76 656 aa6.1□□□□□ -1.43
UBR3-211ENST00000487689 IFNL2Q8IZJ0 200 aa6.1□□□□□ -1.43
UBR3-211ENST00000487689 TTLL11Q8NHH1 800 aa6.1□□□□□ -1.43
UBR3-211ENST00000487689 HNRNPLLQ8WVV9 542 aaKnown RBP6.1□□□□□ -1.43
UBR3-211ENST00000487689 IPO9Q96P70 1041 aaKnown RBP6.1□□□□□ -1.43
UBR3-211ENST00000487689 ALG1Q9BT22 464 aa6.1□□□□□ -1.43
UBR3-211ENST00000487689 JAM3Q9BX67 310 aa6.1□□□□□ -1.43
UBR3-211ENST00000487689 TRIM55Q9BYV6 548 aa6.1□□□□□ -1.43
UBR3-211ENST00000487689 DLL4Q9NR61 685 aa6.1□□□□□ -1.43
UBR3-211ENST00000487689 TCAF1Q9Y4C2 921 aa6.1□□□□□ -1.43
UBR3-211ENST00000487689 NACADO15069 1562 aa6.1□□□□□ -1.43
UBR3-211ENST00000487689 ARNTLO00327 626 aa6.09□□□□□ -1.43
UBR3-211ENST00000487689 SLC27A2O14975 620 aa6.09□□□□□ -1.43
UBR3-211ENST00000487689 PRODHO43272 600 aa6.09□□□□□ -1.43
UBR3-211ENST00000487689 B4GALT3O60512 393 aa6.09□□□□□ -1.43
UBR3-211ENST00000487689 B4GALT4O60513 344 aa6.09□□□□□ -1.43
UBR3-211ENST00000487689 FGRP09769 529 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms