RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 EFCAB14O75071 495 aa14.3□□□□□ -0.12
SREBF1-215ENST00000487401 CXCL10P02778 98 aa14.3□□□□□ -0.12
SREBF1-215ENST00000487401 SMIM10L2AP0DMW4 78 aa14.3□□□□□ -0.12
SREBF1-215ENST00000487401 SMIM10L2BP0DMW5 78 aa14.3□□□□□ -0.12
SREBF1-215ENST00000487401 SP4Q02446 784 aa14.3□□□□□ -0.12
SREBF1-215ENST00000487401 SEMA3FQ13275 785 aa14.3□□□□□ -0.12
SREBF1-215ENST00000487401 IKBKEQ14164 716 aa14.3□□□□□ -0.12
SREBF1-215ENST00000487401 KRT32Q14532 448 aa14.3□□□□□ -0.12
SREBF1-215ENST00000487401 TRIM71Q2Q1W2 868 aaKnown RBP14.3□□□□□ -0.12
SREBF1-215ENST00000487401 ZNF618Q5T7W0 954 aa14.3□□□□□ -0.12
SREBF1-215ENST00000487401 DHX32Q7L7V1 743 aaKnown RBP14.3□□□□□ -0.12
SREBF1-215ENST00000487401 GPR20Q99678 358 aa14.3□□□□□ -0.12
SREBF1-215ENST00000487401 EHMT1Q9H9B1 1298 aa14.3□□□□□ -0.12
SREBF1-215ENST00000487401 ZNF215Q9UL58 517 aaPredicted RBP14.3□□□□□ -0.12
SREBF1-215ENST00000487401 RSPH10B2B2RC85 870 aa14.29□□□□□ -0.12
SREBF1-215ENST00000487401 ZBTB43O43298 467 aa14.29□□□□□ -0.12
SREBF1-215ENST00000487401 RSPH10BP0C881 870 aa14.29□□□□□ -0.12
SREBF1-215ENST00000487401 WDR5P61964 334 aaKnown RBP14.29□□□□□ -0.12
SREBF1-215ENST00000487401 FGD1P98174 961 aa14.29□□□□□ -0.12
SREBF1-215ENST00000487401 EXOSC10Q01780 885 aaKnown RBP14.29□□□□□ -0.12
SREBF1-215ENST00000487401 HIC1Q14526 733 aa14.29□□□□□ -0.12
SREBF1-215ENST00000487401 UBE2SQ16763 222 aa14.29□□□□□ -0.12
SREBF1-215ENST00000487401 RTN1Q16799 776 aa14.29□□□□□ -0.12
SREBF1-215ENST00000487401 SERINC5Q86VE9 423 aa14.29□□□□□ -0.12
SREBF1-215ENST00000487401 MICALL1Q8N3F8 863 aa14.29□□□□□ -0.12
SREBF1-215ENST00000487401 WNT8BQ93098 351 aa14.29□□□□□ -0.12
SREBF1-215ENST00000487401 GPRASP2Q96D09 838 aa14.29□□□□□ -0.12
SREBF1-215ENST00000487401 TSPYL2Q9H2G4 693 aaPredicted RBP14.29□□□□□ -0.12
SREBF1-215ENST00000487401 RNPEPQ9H4A4 650 aa14.29□□□□□ -0.12
SREBF1-215ENST00000487401 CERS4Q9HA82 394 aa14.29□□□□□ -0.12
SREBF1-215ENST00000487401 TREHO43280 583 aa14.28□□□□□ -0.12
SREBF1-215ENST00000487401 GTPBP6O43824 516 aaPredicted RBP14.28□□□□□ -0.12
SREBF1-215ENST00000487401 LGR5O75473 907 aa14.28□□□□□ -0.12
SREBF1-215ENST00000487401 HMGB1P09429 215 aaKnown RBP14.28□□□□□ -0.12
SREBF1-215ENST00000487401 TSGA10IPQ3SY00 556 aa14.28□□□□□ -0.12
SREBF1-215ENST00000487401 TJAP1Q5JTD0 557 aa14.28□□□□□ -0.12
SREBF1-215ENST00000487401 TRAF7Q6Q0C0 670 aa14.28□□□□□ -0.12
SREBF1-215ENST00000487401 APOA5Q6Q788 366 aa14.28□□□□□ -0.12
SREBF1-215ENST00000487401 EMSYQ7Z589 1322 aa14.28□□□□□ -0.12
SREBF1-215ENST00000487401 ARNTL2Q8WYA1 636 aa14.28□□□□□ -0.12
SREBF1-215ENST00000487401 TCEANC2Q96MN5 208 aa14.28□□□□□ -0.12
SREBF1-215ENST00000487401 PRDM6Q9NQX0 595 aa14.28□□□□□ -0.12
SREBF1-215ENST00000487401 SETD4Q9NVD3 440 aa14.28□□□□□ -0.12
SREBF1-215ENST00000487401 NAP1L2Q9ULW6 460 aaPredicted RBP14.28□□□□□ -0.12
SREBF1-215ENST00000487401 PCDHA6Q9UN73 950 aa14.28□□□□□ -0.12
SREBF1-215ENST00000487401 PCDHA8Q9Y5H6 950 aa14.28□□□□□ -0.12
SREBF1-215ENST00000487401 UNC80Q8N2C7 3258 aa14.28□□□□□ -0.12
SREBF1-215ENST00000487401 RFXAPO00287 272 aa14.27□□□□□ -0.13
SREBF1-215ENST00000487401 NAPAP54920 295 aa14.27□□□□□ -0.13
SREBF1-215ENST00000487401 TAP1Q03518 808 aa14.27□□□□□ -0.13
SREBF1-215ENST00000487401 MTMR1Q13613 665 aa14.27□□□□□ -0.13
SREBF1-215ENST00000487401 TRIM50Q86XT4 487 aa14.27□□□□□ -0.13
SREBF1-215ENST00000487401 RASEFQ8IZ41 740 aa14.27□□□□□ -0.13
SREBF1-215ENST00000487401 ATXN2LQ8WWM7 1075 aaKnown RBP14.27□□□□□ -0.13
SREBF1-215ENST00000487401 CCDC136Q96JN2 1154 aa14.27□□□□□ -0.13
SREBF1-215ENST00000487401 RAD9AQ99638 391 aa14.27□□□□□ -0.13
SREBF1-215ENST00000487401 PKD2L1Q9P0L9 805 aa14.27□□□□□ -0.13
SREBF1-215ENST00000487401 BRPF3Q9ULD4 1205 aa14.27□□□□□ -0.13
SREBF1-215ENST00000487401 V9GY48 417 aaPredicted RBP14.27□□□□□ -0.13
SREBF1-215ENST00000487401 CDH23Q9H251 3354 aa14.27□□□□□ -0.13
SREBF1-215ENST00000487401 KLF18A0A0U1RQI7 1052 aa14.26□□□□□ -0.13
SREBF1-215ENST00000487401 GOLGA8AA7E2F4 631 aa14.26□□□□□ -0.13
SREBF1-215ENST00000487401 GOLGA8BA8MQT2 603 aa14.26□□□□□ -0.13
SREBF1-215ENST00000487401 MAFGO15525 162 aa14.26□□□□□ -0.13
SREBF1-215ENST00000487401 ATP9AO75110 1047 aa14.26□□□□□ -0.13
SREBF1-215ENST00000487401 CAND2O75155 1236 aa14.26□□□□□ -0.13
SREBF1-215ENST00000487401 KCNA2P16389 499 aa14.26□□□□□ -0.13
SREBF1-215ENST00000487401 ITGB5P18084 799 aa14.26□□□□□ -0.13
SREBF1-215ENST00000487401 HOXC8P31273 242 aa14.26□□□□□ -0.13
SREBF1-215ENST00000487401 DEFB103AP81534 67 aa14.26□□□□□ -0.13
SREBF1-215ENST00000487401 ARHGAP4P98171 946 aa14.26□□□□□ -0.13
SREBF1-215ENST00000487401 MBTPS1Q14703 1052 aa14.26□□□□□ -0.13
SREBF1-215ENST00000487401 TCTN1Q2MV58 587 aa14.26□□□□□ -0.13
SREBF1-215ENST00000487401 ADCK5Q3MIX3 580 aa14.26□□□□□ -0.13
SREBF1-215ENST00000487401 WWC2Q6AWC2 1192 aa14.26□□□□□ -0.13
SREBF1-215ENST00000487401 TMCO2Q7Z6W1 182 aaPredicted RBP14.26□□□□□ -0.13
SREBF1-215ENST00000487401 DBF4BQ8NFT6 615 aa14.26□□□□□ -0.13
SREBF1-215ENST00000487401 SEPT1Q8WYJ6 367 aa14.26□□□□□ -0.13
SREBF1-215ENST00000487401 SEPT8Q92599 483 aa14.26□□□□□ -0.13
SREBF1-215ENST00000487401 JADE2Q9NQC1 790 aa14.26□□□□□ -0.13
SREBF1-215ENST00000487401 THEGQ9P2T0 379 aa14.26□□□□□ -0.13
SREBF1-215ENST00000487401 TELO2Q9Y4R8 837 aa14.26□□□□□ -0.13
SREBF1-215ENST00000487401 UBIAD1Q9Y5Z9 338 aa14.26□□□□□ -0.13
SREBF1-215ENST00000487401 SCN10AQ9Y5Y9 1956 aa14.25□□□□□ -0.13
SREBF1-215ENST00000487401 CHD9Q3L8U1 2897 aa14.25□□□□□ -0.13
SREBF1-215ENST00000487401 NRCAMQ92823 1304 aa14.25□□□□□ -0.13
SREBF1-215ENST00000487401 GJB5O95377 273 aa14.25□□□□□ -0.13
SREBF1-215ENST00000487401 FOSP01100 380 aaPredicted RBP14.25□□□□□ -0.13
SREBF1-215ENST00000487401 AMHP03971 560 aa14.25□□□□□ -0.13
SREBF1-215ENST00000487401 CTSHP09668 335 aa14.25□□□□□ -0.13
SREBF1-215ENST00000487401 TCF7P36402 384 aaPredicted RBP14.25□□□□□ -0.13
SREBF1-215ENST00000487401 ADCY7P51828 1080 aa14.25□□□□□ -0.13
SREBF1-215ENST00000487401 MRPS5P82675 430 aaKnown RBP14.25□□□□□ -0.13
SREBF1-215ENST00000487401 SKIV2LQ15477 1246 aaKnown RBP14.25□□□□□ -0.13
SREBF1-215ENST00000487401 PPP1R18Q6NYC8 613 aa14.25□□□□□ -0.13
SREBF1-215ENST00000487401 FAM117BQ6P1L5 589 aa14.25□□□□□ -0.13
SREBF1-215ENST00000487401 TEX2Q8IWB9 1127 aa14.25□□□□□ -0.13
SREBF1-215ENST00000487401 IL27Q8NEV9 243 aa14.25□□□□□ -0.13
SREBF1-215ENST00000487401 GLG1Q92896 1179 aa14.25□□□□□ -0.13
SREBF1-215ENST00000487401 GLT8D2Q9H1C3 349 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms