RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 ANKRD20A3Q5VUR7 823 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 CDCA2Q69YH5 1023 aaPredicted RBP6.82□□□□□ -1.32
VPS13D-209ENST00000487188 CNNM4Q6P4Q7 775 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 LPIN2Q92539 896 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 FAM210AQ96ND0 272 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 FMO2Q99518 471 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 SLC52A2Q9HAB3 445 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 TNKSO95271 1327 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 PPIP5K2O43314 1243 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 PDE6CP51160 858 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 KCNJ2P63252 427 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 ASIC2Q16515 512 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 EARS2Q5JPH6 523 aaKnown RBP6.82□□□□□ -1.32
VPS13D-209ENST00000487188 TOM1L2Q6ZVM7 507 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 TAOK1Q7L7X3 1001 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 ERICH1Q86X53 443 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 TEX9Q8N6V9 391 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 GBP7Q8N8V2 638 aaPredicted RBP6.82□□□□□ -1.32
VPS13D-209ENST00000487188 NAF1Q96HR8 494 aaKnown RBP6.82□□□□□ -1.32
VPS13D-209ENST00000487188 ZNF570Q96NI8 536 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 ERGIC2Q96RQ1 377 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 LSM14BQ9BX40 385 aaKnown RBP6.82□□□□□ -1.32
VPS13D-209ENST00000487188 RAB17Q9H0T7 212 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 KCNK9Q9NPC2 374 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 MTMR7Q9Y216 660 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 UQCRFS1P1P0C7P4 283 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 KRT13P13646 458 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 ATP4AP20648 1035 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 MCAMP43121 646 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 RAB27AP51159 221 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 BLMHQ13867 455 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 SOGA3Q5TF21 947 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 EMC10Q5UCC4 262 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 ANKRD40Q6AI12 368 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 TTI2Q6NXR4 508 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 MAEAQ7L5Y9 396 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 PEX26Q7Z412 305 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 VSIG1Q86XK7 387 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 ANKRD42Q8N9B4 389 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 NEK9Q8TD19 979 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 TBC1D5Q92609 795 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 PBKQ96KB5 322 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 PRMT1Q99873 361 aaKnown RBP6.81□□□□□ -1.32
VPS13D-209ENST00000487188 AZI2Q9H6S1 392 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 PIH1D3Q9NQM4 214 aaKnown RBP6.81□□□□□ -1.32
VPS13D-209ENST00000487188 ABCF3Q9NUQ8 709 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 RASAL2Q9UJF2 1139 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 PHF8Q9UPP1 1060 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 H7C1W4 665 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 LIN7AO14910 233 aaPredicted RBP6.81□□□□□ -1.32
VPS13D-209ENST00000487188 ZNF131P52739 623 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 RAD23BP54727 409 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 CUL3Q13618 768 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 PPP2R5BQ15173 497 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 FIGNQ5HY92 759 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 PDXDC1Q6P996 788 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 DZIP3Q86Y13 1208 aaKnown RBP6.81□□□□□ -1.32
VPS13D-209ENST00000487188 MIGA1Q8NAN2 632 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 B4GALNT2Q8NHY0 566 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 ITFG2Q969R8 447 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 CALML4Q96GE6 196 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 ACSBG1Q96GR2 724 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 MYH13Q9UKX3 1938 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 SART1O43290 800 aaKnown RBP6.81□□□□□ -1.32
VPS13D-209ENST00000487188 PLEKHA8P1O95397 391 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 CALML3P27482 149 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 SLCO1A2P46721 670 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 TRAPPC10P48553 1259 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 POLR2FP61218 127 aaKnown RBP6.81□□□□□ -1.32
VPS13D-209ENST00000487188 MRPS35P82673 323 aaKnown RBP6.81□□□□□ -1.32
VPS13D-209ENST00000487188 SETDB1Q15047 1291 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 CROCCP2Q86T23 111 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 VPS36Q86VN1 386 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 SPICE1Q8N0Z3 855 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 STRBPQ96SI9 672 aaKnown RBP6.81□□□□□ -1.32
VPS13D-209ENST00000487188 PHF20Q9BVI0 1012 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 TTYH3Q9C0H2 523 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 ZMYND12Q9H0C1 365 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 LRP2BPQ9P2M1 347 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 MTRF1LQ9UGC7 380 aaKnown RBP6.81□□□□□ -1.32
VPS13D-209ENST00000487188 AMACRQ9UHK6 382 aa6.81□□□□□ -1.32
VPS13D-209ENST00000487188 NOC2LQ9Y3T9 749 aaKnown RBP6.81□□□□□ -1.32
VPS13D-209ENST00000487188 PP2D1A8MPX8 630 aa6.8□□□□□ -1.32
VPS13D-209ENST00000487188 CCDC188H7C350 402 aa6.8□□□□□ -1.32
VPS13D-209ENST00000487188 ASAP2O43150 1006 aa6.8□□□□□ -1.32
VPS13D-209ENST00000487188 SERPING1P05155 500 aa6.8□□□□□ -1.32
VPS13D-209ENST00000487188 FESP07332 822 aa6.8□□□□□ -1.32
VPS13D-209ENST00000487188 PAEPP09466 180 aa6.8□□□□□ -1.32
VPS13D-209ENST00000487188 SETSIPP0DME0 302 aa6.8□□□□□ -1.32
VPS13D-209ENST00000487188 CALM1P0DP23 149 aa6.8□□□□□ -1.32
VPS13D-209ENST00000487188 CALM2P0DP24 149 aa6.8□□□□□ -1.32
VPS13D-209ENST00000487188 CALM3P0DP25 149 aa6.8□□□□□ -1.32
VPS13D-209ENST00000487188 KLRC1P26715 233 aa6.8□□□□□ -1.32
VPS13D-209ENST00000487188 MSH2P43246 934 aa6.8□□□□□ -1.32
VPS13D-209ENST00000487188 ROR2Q01974 943 aaKnown RBP6.8□□□□□ -1.32
VPS13D-209ENST00000487188 BYSLQ13895 437 aaKnown RBP6.8□□□□□ -1.32
VPS13D-209ENST00000487188 ERMARDQ5T6L9 678 aa6.8□□□□□ -1.32
VPS13D-209ENST00000487188 CWF19L1Q69YN2 538 aaKnown RBP6.8□□□□□ -1.32
VPS13D-209ENST00000487188 CABP7Q86V35 215 aa6.8□□□□□ -1.32
VPS13D-209ENST00000487188 CCDC25Q86WR0 208 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms