RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 PPP1R9BQ96SB3 815 aa9.65□□□□□ -0.86
NUDCD3-209ENST00000487118 RMDN3Q96TC7 470 aa9.65□□□□□ -0.86
NUDCD3-209ENST00000487118 RIT2Q99578 217 aa9.65□□□□□ -0.86
NUDCD3-209ENST00000487118 C7orf25Q9BPX7 421 aa9.65□□□□□ -0.86
NUDCD3-209ENST00000487118 WDR11Q9BZH6 1224 aa9.65□□□□□ -0.86
NUDCD3-209ENST00000487118 NT5C3AQ9H0P0 336 aa9.65□□□□□ -0.86
NUDCD3-209ENST00000487118 RBPJLQ9UBG7 517 aa9.65□□□□□ -0.86
NUDCD3-209ENST00000487118 PNMA3Q9UL41 463 aa9.65□□□□□ -0.86
NUDCD3-209ENST00000487118 CCL15-CCL14A0A0B4J2E2 113 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 IKBKBO14920 756 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 KLRC4O43908 158 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 MED24O75448 989 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 RPN1P04843 607 aaKnown RBP9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 COL9A1P20849 921 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 RPA1P27694 616 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 CASP1P29466 404 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 CCND2P30279 289 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 CCT6AP40227 531 aaKnown RBP9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 AMPD3Q01432 767 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 CCDC173Q0VFZ6 552 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 KCNB1Q14721 858 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 ECM1Q16610 540 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 CCL15Q16663 113 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 LRCH2Q5VUJ6 765 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 ARHGEF16Q5VV41 709 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 KCNK18Q7Z418 384 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 VSIG10LQ86VR7 867 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 SHCBP1Q8NEM2 672 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 DNERQ8NFT8 737 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 ERMNQ8TAM6 284 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 NSUN6Q8TEA1 469 aaKnown RBP9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 BRI3BPQ8WY22 251 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 LARP4BQ92615 738 aaKnown RBP9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 RAD54LQ92698 747 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 PDLIM2Q96JY6 352 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 PURBQ96QR8 312 aaKnown RBP9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 PLIN2Q99541 437 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 ZNF577Q9BSK1 485 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 POLR3CQ9BUI4 534 aaPredicted RBP9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 TEKT3Q9BXF9 490 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 MOV10L1Q9BXT6 1211 aaKnown RBP9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 TRIM9Q9C026 710 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 BLZF1Q9H2G9 400 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 AGO4Q9HCK5 861 aaKnown RBP9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 TXNRD2Q9NNW7 524 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 KCNH7Q9NS40 1196 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 RMND1Q9NWS8 449 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 RNF186Q9NXI6 227 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 DACH1Q9UI36 760 aa9.64□□□□□ -0.87
NUDCD3-209ENST00000487118 TESPA1A2RU30 521 aaPredicted RBP9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 BTBD19C9JJ37 291 aa9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 IPO5O00410 1097 aaKnown RBP9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 EML1O00423 815 aa9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 MAFGO15525 162 aa9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 DHX15O43143 795 aaKnown RBP9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 PEX10O60683 326 aa9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 GAS7O60861 476 aa9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 STAM2O75886 525 aa9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 NR3C2P08235 984 aa9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 SPATA31C1P0DKV0 1188 aa9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 MUTP22033 750 aa9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 NCAPHQ15003 741 aa9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 EPHA7Q15375 998 aa9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 ISM2Q6H9L7 571 aa9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 NCAPH2Q6IBW4 605 aa9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 SV2BQ7L1I2 683 aa9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 AOPEPQ8N6M6 819 aa9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 FAM133AQ8N9E0 248 aa9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 NEK9Q8TD19 979 aa9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 ANP32BQ92688 251 aaKnown RBP9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 GPRASP2Q96D09 838 aa9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 ZFP91Q96JP5 570 aaPredicted RBP9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 INPP4AQ96PE3 977 aaPredicted RBP9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 UIMC1Q96RL1 719 aa9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 IWS1Q96ST2 819 aa9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 PAGR1Q9BTK6 254 aa9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 LRRC27Q9C0I9 530 aa9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 TUFT1Q9NNX1 390 aa9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 RAPGEFL1Q9UHV5 662 aa9.63□□□□□ -0.87
NUDCD3-209ENST00000487118 ASTN1O14525 1302 aa9.62□□□□□ -0.87
NUDCD3-209ENST00000487118 DNAJC25-GNG10A0A024R161 153 aa9.62□□□□□ -0.87
NUDCD3-209ENST00000487118 POTEB3A0JP26 581 aa9.62□□□□□ -0.87
NUDCD3-209ENST00000487118 MYMKA6NI61 221 aa9.62□□□□□ -0.87
NUDCD3-209ENST00000487118 SMTNL1A8MU46 457 aa9.62□□□□□ -0.87
NUDCD3-209ENST00000487118 GOLGA6L19H0YKK7 550 aa9.62□□□□□ -0.87
NUDCD3-209ENST00000487118 PDHXO00330 501 aa9.62□□□□□ -0.87
NUDCD3-209ENST00000487118 AP5Z1O43299 807 aa9.62□□□□□ -0.87
NUDCD3-209ENST00000487118 RHOBTB3O94955 611 aa9.62□□□□□ -0.87
NUDCD3-209ENST00000487118 MYCLP12524 364 aaPredicted RBP9.62□□□□□ -0.87
NUDCD3-209ENST00000487118 ERCC3P19447 782 aa9.62□□□□□ -0.87
NUDCD3-209ENST00000487118 EDNRBP24530 442 aa9.62□□□□□ -0.87
NUDCD3-209ENST00000487118 ERCC5P28715 1186 aaPredicted RBP9.62□□□□□ -0.87
NUDCD3-209ENST00000487118 ERVK-9P63128 1117 aa9.62□□□□□ -0.87
NUDCD3-209ENST00000487118 ERVK-24P63145 666 aa9.62□□□□□ -0.87
NUDCD3-209ENST00000487118 ITGB3BPQ13352 177 aaPredicted RBP9.62□□□□□ -0.87
NUDCD3-209ENST00000487118 MTMR1Q13613 665 aa9.62□□□□□ -0.87
NUDCD3-209ENST00000487118 MCM6Q14566 821 aa9.62□□□□□ -0.87
NUDCD3-209ENST00000487118 Q3C1V9 767 aa9.62□□□□□ -0.87
NUDCD3-209ENST00000487118 ZNF658Q5TYW1 1059 aaPredicted RBP9.62□□□□□ -0.87
NUDCD3-209ENST00000487118 RGMBQ6NW40 437 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms