RNA–Protein interactions for RNA: ENST00000486837.1

LMBR1-218, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-218ENST00000486837 CARMIL2Q6F5E8 1435 aa6.9□□□□□ -1.31
LMBR1-218ENST00000486837 F2P00734 622 aa6.89□□□□□ -1.31
LMBR1-218ENST00000486837 CPEP16870 476 aa6.89□□□□□ -1.31
LMBR1-218ENST00000486837 SDHBP21912 280 aa6.89□□□□□ -1.31
LMBR1-218ENST00000486837 EPHA5P54756 1037 aa6.89□□□□□ -1.31
LMBR1-218ENST00000486837 JAM2P57087 298 aa6.89□□□□□ -1.31
LMBR1-218ENST00000486837 FIGNQ5HY92 759 aa6.89□□□□□ -1.31
LMBR1-218ENST00000486837 MPZL3Q6UWV2 235 aa6.89□□□□□ -1.31
LMBR1-218ENST00000486837 EP400NLQ6ZTU2 488 aa6.89□□□□□ -1.31
LMBR1-218ENST00000486837 OSTM1Q86WC4 334 aa6.89□□□□□ -1.31
LMBR1-218ENST00000486837 AFAP1L2Q8N4X5 818 aa6.89□□□□□ -1.31
LMBR1-218ENST00000486837 OR2W6PQ8NHA6 318 aa6.89□□□□□ -1.31
LMBR1-218ENST00000486837 SH3RF2Q8TEC5 729 aa6.89□□□□□ -1.31
LMBR1-218ENST00000486837 PCDH12Q9NPG4 1184 aa6.89□□□□□ -1.31
LMBR1-218ENST00000486837 PALD1Q9ULE6 856 aa6.89□□□□□ -1.31
LMBR1-218ENST00000486837 SRPK3Q9UPE1 567 aa6.89□□□□□ -1.31
LMBR1-218ENST00000486837 ZKSCAN5Q9Y2L8 839 aa6.89□□□□□ -1.31
LMBR1-218ENST00000486837 SIT1Q9Y3P8 196 aa6.89□□□□□ -1.31
LMBR1-218ENST00000486837 SLC12A8A0AV02 714 aa6.88□□□□□ -1.31
LMBR1-218ENST00000486837 MAN2B1O00754 1011 aa6.88□□□□□ -1.31
LMBR1-218ENST00000486837 CLASP2O75122 1294 aaKnown RBP6.88□□□□□ -1.31
LMBR1-218ENST00000486837 SCNN1BP51168 640 aa6.88□□□□□ -1.31
LMBR1-218ENST00000486837 PRR5P85299 388 aa6.88□□□□□ -1.31
LMBR1-218ENST00000486837 SEPT7Q16181 437 aaKnown RBP6.88□□□□□ -1.31
LMBR1-218ENST00000486837 KCTD1Q719H9 257 aa6.88□□□□□ -1.31
LMBR1-218ENST00000486837 MILR1Q7Z6M3 343 aa6.88□□□□□ -1.31
LMBR1-218ENST00000486837 TTLL11Q8NHH1 800 aa6.88□□□□□ -1.31
LMBR1-218ENST00000486837 GPATCH3Q96I76 525 aa6.88□□□□□ -1.31
LMBR1-218ENST00000486837 BOCQ9BWV1 1114 aa6.88□□□□□ -1.31
LMBR1-218ENST00000486837 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.88□□□□□ -1.31
LMBR1-218ENST00000486837 RXFP1Q9HBX9 757 aa6.88□□□□□ -1.31
LMBR1-218ENST00000486837 NOP58Q9Y2X3 529 aaKnown RBP6.88□□□□□ -1.31
LMBR1-218ENST00000486837 TCRBV5S2A0A599 114 aa6.87□□□□□ -1.31
LMBR1-218ENST00000486837 PTPDC1A2A3K4 754 aa6.87□□□□□ -1.31
LMBR1-218ENST00000486837 SLC27A2O14975 620 aa6.87□□□□□ -1.31
LMBR1-218ENST00000486837 PEX10O60683 326 aa6.87□□□□□ -1.31
LMBR1-218ENST00000486837 GAS7O60861 476 aa6.87□□□□□ -1.31
LMBR1-218ENST00000486837 TAL1P17542 331 aaPredicted RBP6.87□□□□□ -1.31
LMBR1-218ENST00000486837 KRT15P19012 456 aa6.87□□□□□ -1.31
LMBR1-218ENST00000486837 GJA4P35212 333 aa6.87□□□□□ -1.31
LMBR1-218ENST00000486837 NFKB2Q00653 900 aa6.87□□□□□ -1.31
LMBR1-218ENST00000486837 AMPD3Q01432 767 aa6.87□□□□□ -1.31
LMBR1-218ENST00000486837 DSG1Q02413 1049 aa6.87□□□□□ -1.31
LMBR1-218ENST00000486837 SART3Q15020 963 aaKnown RBP6.87□□□□□ -1.31
LMBR1-218ENST00000486837 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.87□□□□□ -1.31
LMBR1-218ENST00000486837 PTRH1Q86Y79 214 aaKnown RBP6.87□□□□□ -1.31
LMBR1-218ENST00000486837 UBR7Q8N806 425 aa6.87□□□□□ -1.31
LMBR1-218ENST00000486837 LIN37Q96GY3 246 aaPredicted RBP6.87□□□□□ -1.31
LMBR1-218ENST00000486837 ATP23Q9Y6H3 246 aa6.87□□□□□ -1.31
LMBR1-218ENST00000486837 VIPR1P32241 457 aa6.86□□□□□ -1.31
LMBR1-218ENST00000486837 TUSC3Q13454 348 aa6.86□□□□□ -1.31
LMBR1-218ENST00000486837 MIB1Q86YT6 1006 aa6.86□□□□□ -1.31
LMBR1-218ENST00000486837 NOSTRINQ8IVI9 506 aa6.86□□□□□ -1.31
LMBR1-218ENST00000486837 EPB41L4BQ9H329 900 aa6.86□□□□□ -1.31
LMBR1-218ENST00000486837 hCG_2014768A0A024R1R8 64 aa6.85□□□□□ -1.31
LMBR1-218ENST00000486837 ZEB2O60315 1214 aa6.85□□□□□ -1.31
LMBR1-218ENST00000486837 BRINP1O60477 761 aa6.85□□□□□ -1.31
LMBR1-218ENST00000486837 ZBTB48P10074 688 aaPredicted RBP6.85□□□□□ -1.31
LMBR1-218ENST00000486837 BPIP17213 487 aa6.85□□□□□ -1.31
LMBR1-218ENST00000486837 POU3F3P20264 500 aaPredicted RBP6.85□□□□□ -1.31
LMBR1-218ENST00000486837 IRF9Q00978 393 aa6.85□□□□□ -1.31
LMBR1-218ENST00000486837 OCRLQ01968 901 aa6.85□□□□□ -1.31
LMBR1-218ENST00000486837 TMC6Q7Z403 805 aa6.85□□□□□ -1.31
LMBR1-218ENST00000486837 ZNF605Q86T29 641 aa6.85□□□□□ -1.31
LMBR1-218ENST00000486837 AMIGO3Q86WK7 504 aa6.85□□□□□ -1.31
LMBR1-218ENST00000486837 NXPE1Q8N323 547 aa6.85□□□□□ -1.31
LMBR1-218ENST00000486837 SMC1BQ8NDV3 1235 aa6.85□□□□□ -1.31
LMBR1-218ENST00000486837 ALG3Q92685 438 aa6.85□□□□□ -1.31
LMBR1-218ENST00000486837 USP7Q93009 1102 aa6.85□□□□□ -1.31
LMBR1-218ENST00000486837 CD244Q9BZW8 370 aa6.85□□□□□ -1.31
LMBR1-218ENST00000486837 MCM8Q9UJA3 840 aa6.85□□□□□ -1.31
LMBR1-218ENST00000486837 HCFC2Q9Y5Z7 792 aa6.85□□□□□ -1.31
LMBR1-218ENST00000486837 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.85□□□□□ -1.31
LMBR1-218ENST00000486837 ZNF891A8MT65 544 aaPredicted RBP6.84□□□□□ -1.31
LMBR1-218ENST00000486837 H7C1D1 291 aa6.84□□□□□ -1.31
LMBR1-218ENST00000486837 HIP1RO75146 1068 aa6.84□□□□□ -1.31
LMBR1-218ENST00000486837 EYA4O95677 639 aa6.84□□□□□ -1.31
LMBR1-218ENST00000486837 YBX3P16989 372 aaKnown RBP eCLIP6.84□□□□□ -1.31
LMBR1-218ENST00000486837 SRSF3P84103 164 aaKnown RBP6.84□□□□□ -1.31
LMBR1-218ENST00000486837 STRN3Q13033 797 aa6.84□□□□□ -1.31
LMBR1-218ENST00000486837 STRA8Q7Z7C7 330 aa6.84□□□□□ -1.31
LMBR1-218ENST00000486837 FAM126BQ8IXS8 530 aa6.84□□□□□ -1.31
LMBR1-218ENST00000486837 ARRDC4Q8NCT1 418 aa6.84□□□□□ -1.31
LMBR1-218ENST00000486837 CLEC4DQ8WXI8 215 aa6.84□□□□□ -1.31
LMBR1-218ENST00000486837 DLG3Q92796 817 aa6.84□□□□□ -1.31
LMBR1-218ENST00000486837 TTC1Q99614 292 aa6.84□□□□□ -1.31
LMBR1-218ENST00000486837 RNF38Q9H0F5 515 aa6.84□□□□□ -1.31
LMBR1-218ENST00000486837 NSUN3Q9H649 340 aaKnown RBP6.84□□□□□ -1.31
LMBR1-218ENST00000486837 IFT22Q9H7X7 185 aa6.84□□□□□ -1.31
LMBR1-218ENST00000486837 NGRNQ9NPE2 291 aaKnown RBP6.84□□□□□ -1.31
LMBR1-218ENST00000486837 DCP1AQ9NPI6 582 aaPredicted RBP6.84□□□□□ -1.31
LMBR1-218ENST00000486837 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.84□□□□□ -1.31
LMBR1-218ENST00000486837 DTLQ9NZJ0 730 aa6.84□□□□□ -1.31
LMBR1-218ENST00000486837 HSPBP1Q9NZL4 362 aa6.84□□□□□ -1.31
LMBR1-218ENST00000486837 ATP8A1Q9Y2Q0 1164 aa6.84□□□□□ -1.31
LMBR1-218ENST00000486837 TELO2Q9Y4R8 837 aa6.84□□□□□ -1.31
LMBR1-218ENST00000486837 IRS2Q9Y4H2 1338 aa6.83□□□□□ -1.32
LMBR1-218ENST00000486837 TEX51A0A1B0GUA7 166 aa6.83□□□□□ -1.32
LMBR1-218ENST00000486837 LTFP02788 710 aa6.83□□□□□ -1.32
LMBR1-218ENST00000486837 HMGB1P09429 215 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms