RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 Q4G0T1 1027 aa19.92■□□□□ 0.78
PDLIM7-207ENST00000486828 SYDE2Q5VT97 1194 aa19.92■□□□□ 0.78
PDLIM7-207ENST00000486828 NCAPH2Q6IBW4 605 aa19.92■□□□□ 0.78
PDLIM7-207ENST00000486828 GPBP1Q86WP2 473 aa19.92■□□□□ 0.78
PDLIM7-207ENST00000486828 CEP63Q96MT8 703 aa19.92■□□□□ 0.78
PDLIM7-207ENST00000486828 P2RX7Q99572 595 aaKnown RBP19.92■□□□□ 0.78
PDLIM7-207ENST00000486828 ARHGAP20Q9P2F6 1191 aa19.92■□□□□ 0.78
PDLIM7-207ENST00000486828 ENC1O14682 589 aa19.92■□□□□ 0.78
PDLIM7-207ENST00000486828 MED24O75448 989 aa19.92■□□□□ 0.78
PDLIM7-207ENST00000486828 MMP14P50281 582 aa19.92■□□□□ 0.78
PDLIM7-207ENST00000486828 FAM193AP78312 1265 aa19.92■□□□□ 0.78
PDLIM7-207ENST00000486828 CYP27A1Q02318 531 aa19.92■□□□□ 0.78
PDLIM7-207ENST00000486828 SPIRE1Q08AE8 756 aa19.92■□□□□ 0.78
PDLIM7-207ENST00000486828 HAUS3Q68CZ6 603 aa19.92■□□□□ 0.78
PDLIM7-207ENST00000486828 UIMC1Q96RL1 719 aa19.92■□□□□ 0.78
PDLIM7-207ENST00000486828 EDEM3Q9BZQ6 932 aa19.92■□□□□ 0.78
PDLIM7-207ENST00000486828 TDRD3Q9H7E2 651 aaKnown RBP19.92■□□□□ 0.78
PDLIM7-207ENST00000486828 ZNF219Q9P2Y4 722 aaPredicted RBP19.92■□□□□ 0.78
PDLIM7-207ENST00000486828 SAR1BQ9Y6B6 198 aa19.92■□□□□ 0.78
PDLIM7-207ENST00000486828 COL2A1P02458 1487 aaPredicted RBP19.91■□□□□ 0.78
PDLIM7-207ENST00000486828 PITPNM2Q9BZ72 1349 aa19.91■□□□□ 0.78
PDLIM7-207ENST00000486828 ANO9A1A5B4 782 aa19.91■□□□□ 0.78
PDLIM7-207ENST00000486828 FRMD3A2A2Y4 597 aa19.91■□□□□ 0.78
PDLIM7-207ENST00000486828 TRAF5O00463 557 aa19.91■□□□□ 0.78
PDLIM7-207ENST00000486828 ZNF263O14978 683 aa19.91■□□□□ 0.78
PDLIM7-207ENST00000486828 FOSP01100 380 aaPredicted RBP19.91■□□□□ 0.78
PDLIM7-207ENST00000486828 PLEKP08567 350 aaPredicted RBP19.91■□□□□ 0.78
PDLIM7-207ENST00000486828 CHRNA5P30532 468 aa19.91■□□□□ 0.78
PDLIM7-207ENST00000486828 STAT3P40763 770 aa19.91■□□□□ 0.78
PDLIM7-207ENST00000486828 KIF5AQ12840 1032 aa19.91■□□□□ 0.78
PDLIM7-207ENST00000486828 AOC3Q16853 763 aa19.91■□□□□ 0.78
PDLIM7-207ENST00000486828 FGFBP2Q9BYJ0 223 aa19.91■□□□□ 0.78
PDLIM7-207ENST00000486828 HDAC6Q9UBN7 1215 aa19.91■□□□□ 0.78
PDLIM7-207ENST00000486828 ERLIN1O75477 346 aa19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 KIF20AO95235 890 aa19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 LCA5LO95447 670 aa19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 TUBBP07437 444 aa19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 SREBF1P36956 1147 aa19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 SLC12A3P55017 1021 aa19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 SNAP25P60880 206 aa19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 CCDC40Q4G0X9 1142 aa19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 PRR16Q569H4 304 aa19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 RBM26Q5T8P6 1007 aaKnown RBP19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 BTNL9Q6UXG8 535 aa19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 ARHGAP27Q6ZUM4 889 aa19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 BAP1Q92560 729 aa19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 TBC1D7Q9P0N9 293 aa19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 NPHP3-ACAD11A0A0J9YXS1 232 aa19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 SPDYE3A6NKU9 549 aa19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 LRRC53A6NM62 1247 aa19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 GNA14O95837 355 aa19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 GH2P01242 217 aa19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 RHOXF2BP0C7M4 288 aa19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 BMP3P12645 472 aa19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 KIF11P52732 1056 aa19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 MARSP56192 900 aaKnown RBP19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 IKQ13123 557 aaPredicted RBP19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 USH1GQ495M9 461 aa19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 HERC4Q5GLZ8 1057 aaPredicted RBP19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 BEND6Q5SZJ8 279 aaPredicted RBP19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 RRAGAQ7L523 313 aa19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 NOA1Q8NC60 698 aaKnown RBP19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 NEK11Q8NG66 645 aa19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 ERMNQ8TAM6 284 aa19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 SECISBP2LQ93073 1101 aaKnown RBP19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 CNKSR1Q969H4 720 aa19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 LENG9Q96B70 501 aa19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 RHOXF2Q9BQY4 288 aa19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 TANGO6Q9C0B7 1094 aa19.9■□□□□ 0.78
PDLIM7-207ENST00000486828 MAP2K7O14733 419 aa19.89■□□□□ 0.77
PDLIM7-207ENST00000486828 USO1O60763 962 aaKnown RBP19.89■□□□□ 0.77
PDLIM7-207ENST00000486828 EIF4A3P38919 411 aaKnown RBP19.89■□□□□ 0.77
PDLIM7-207ENST00000486828 JAG1P78504 1218 aa19.89■□□□□ 0.77
PDLIM7-207ENST00000486828 KCNMA1Q12791 1236 aa19.89■□□□□ 0.77
PDLIM7-207ENST00000486828 PDXDC1Q6P996 788 aa19.89■□□□□ 0.77
PDLIM7-207ENST00000486828 KRT26Q7Z3Y9 468 aa19.89■□□□□ 0.77
PDLIM7-207ENST00000486828 CATSPER3Q86XQ3 398 aa19.89■□□□□ 0.77
PDLIM7-207ENST00000486828 SCFD1Q8WVM8 642 aa19.89■□□□□ 0.77
PDLIM7-207ENST00000486828 KCTD10Q9H3F6 313 aa19.89■□□□□ 0.77
PDLIM7-207ENST00000486828 SYNPO2Q9UMS6 1093 aa19.89■□□□□ 0.77
PDLIM7-207ENST00000486828 PCDHA13Q9Y5I0 950 aa19.89■□□□□ 0.77
PDLIM7-207ENST00000486828 STK24Q9Y6E0 443 aa19.89■□□□□ 0.77
PDLIM7-207ENST00000486828 DUSP10Q9Y6W6 482 aa19.89■□□□□ 0.77
PDLIM7-207ENST00000486828 KIF13BQ9NQT8 1826 aa19.88■□□□□ 0.77
PDLIM7-207ENST00000486828 POTEFA5A3E0 1075 aa19.88■□□□□ 0.77
PDLIM7-207ENST00000486828 POTEIP0CG38 1075 aa19.88■□□□□ 0.77
PDLIM7-207ENST00000486828 CACNB1Q02641 598 aaPredicted RBP19.88■□□□□ 0.77
PDLIM7-207ENST00000486828 ARSHQ5FYA8 562 aa19.88■□□□□ 0.77
PDLIM7-207ENST00000486828 POTEGQ6S5H5 508 aa19.88■□□□□ 0.77
PDLIM7-207ENST00000486828 POTEEQ6S8J3 1075 aa19.88■□□□□ 0.77
PDLIM7-207ENST00000486828 ZNF771Q7L3S4 317 aaPredicted RBP19.88■□□□□ 0.77
PDLIM7-207ENST00000486828 NELFCDQ8IXH7 590 aa19.88■□□□□ 0.77
PDLIM7-207ENST00000486828 ZC3H3Q8IXZ2 948 aaKnown RBP19.88■□□□□ 0.77
PDLIM7-207ENST00000486828 C7orf43Q8WVR3 580 aa19.88■□□□□ 0.77
PDLIM7-207ENST00000486828 FAM20AQ96MK3 541 aa19.88■□□□□ 0.77
PDLIM7-207ENST00000486828 IFIH1Q9BYX4 1025 aaKnown RBP19.88■□□□□ 0.77
PDLIM7-207ENST00000486828 EMILIN3Q9NT22 766 aa19.88■□□□□ 0.77
PDLIM7-207ENST00000486828 KRT18P05783 430 aaKnown RBP19.88■□□□□ 0.77
PDLIM7-207ENST00000486828 ERCC3P19447 782 aa19.88■□□□□ 0.77
PDLIM7-207ENST00000486828 RPA1P27694 616 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms