RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 DTHD1Q6ZMT9 781 aa10.81□□□□□ -0.68
MCF2L-227ENST00000486806 ZNF579Q8NAF0 562 aaKnown RBP10.81□□□□□ -0.68
MCF2L-227ENST00000486806 CLIC6Q96NY7 704 aa10.81□□□□□ -0.68
MCF2L-227ENST00000486806 UIMC1Q96RL1 719 aa10.81□□□□□ -0.68
MCF2L-227ENST00000486806 TTC12Q9H892 705 aaPredicted RBP10.81□□□□□ -0.68
MCF2L-227ENST00000486806 TBC1D22BQ9NU19 505 aa10.81□□□□□ -0.68
MCF2L-227ENST00000486806 PKD2L1Q9P0L9 805 aa10.81□□□□□ -0.68
MCF2L-227ENST00000486806 PTPN22Q9Y2R2 807 aa10.81□□□□□ -0.68
MCF2L-227ENST00000486806 ZNFX1Q9P2E3 1918 aaKnown RBP10.81□□□□□ -0.68
MCF2L-227ENST00000486806 DOCK3Q8IZD9 2030 aa10.8□□□□□ -0.68
MCF2L-227ENST00000486806 VWA3AA6NCI4 1184 aa10.8□□□□□ -0.68
MCF2L-227ENST00000486806 POTEMA6NI47 508 aa10.8□□□□□ -0.68
MCF2L-227ENST00000486806 GAS7O60861 476 aa10.8□□□□□ -0.68
MCF2L-227ENST00000486806 CUTAO60888 179 aa10.8□□□□□ -0.68
MCF2L-227ENST00000486806 FARP2O94887 1054 aaPredicted RBP10.8□□□□□ -0.68
MCF2L-227ENST00000486806 CCNE2O96020 404 aa10.8□□□□□ -0.68
MCF2L-227ENST00000486806 PRKAR2AP13861 404 aaKnown RBP10.8□□□□□ -0.68
MCF2L-227ENST00000486806 SMPD1P17405 629 aa10.8□□□□□ -0.68
MCF2L-227ENST00000486806 LONP1P36776 959 aaKnown RBP10.8□□□□□ -0.68
MCF2L-227ENST00000486806 ME1P48163 572 aa10.8□□□□□ -0.68
MCF2L-227ENST00000486806 CACNB2Q08289 660 aaPredicted RBP10.8□□□□□ -0.68
MCF2L-227ENST00000486806 NEDD9Q14511 834 aa10.8□□□□□ -0.68
MCF2L-227ENST00000486806 LY6KQ17RY6 165 aa10.8□□□□□ -0.68
MCF2L-227ENST00000486806 TMEM266Q2M3C6 531 aa10.8□□□□□ -0.68
MCF2L-227ENST00000486806 CCDC144BQ3MJ40 725 aa10.8□□□□□ -0.68
MCF2L-227ENST00000486806 DUSP28Q4G0W2 176 aa10.8□□□□□ -0.68
MCF2L-227ENST00000486806 PRAMEF19Q5SWL8 479 aa10.8□□□□□ -0.68
MCF2L-227ENST00000486806 SHC4Q6S5L8 630 aa10.8□□□□□ -0.68
MCF2L-227ENST00000486806 METTL7BQ6UX53 244 aa10.8□□□□□ -0.68
MCF2L-227ENST00000486806 CTU1Q7Z7A3 348 aaKnown RBP10.8□□□□□ -0.68
MCF2L-227ENST00000486806 GIMAP8Q8ND71 665 aaPredicted RBP10.8□□□□□ -0.68
MCF2L-227ENST00000486806 EMID1Q96A84 441 aaPredicted RBP10.8□□□□□ -0.68
MCF2L-227ENST00000486806 AK8Q96MA6 479 aa10.8□□□□□ -0.68
MCF2L-227ENST00000486806 SDF4Q9BRK5 362 aa10.8□□□□□ -0.68
MCF2L-227ENST00000486806 TEKT3Q9BXF9 490 aa10.8□□□□□ -0.68
MCF2L-227ENST00000486806 CSRNP2Q9H175 543 aa10.8□□□□□ -0.68
MCF2L-227ENST00000486806 UNC45AQ9H3U1 944 aa10.8□□□□□ -0.68
MCF2L-227ENST00000486806 BCAS3Q9H6U6 928 aa10.8□□□□□ -0.68
MCF2L-227ENST00000486806 JPH1Q9HDC5 661 aaPredicted RBP10.8□□□□□ -0.68
MCF2L-227ENST00000486806 PCDHA12Q9UN75 941 aa10.8□□□□□ -0.68
MCF2L-227ENST00000486806 GNEQ9Y223 722 aaKnown RBP10.8□□□□□ -0.68
MCF2L-227ENST00000486806 FAM237AA0A1B0GTK4 181 aa10.79□□□□□ -0.68
MCF2L-227ENST00000486806 A0A1W2PQ27 194 aa10.79□□□□□ -0.68
MCF2L-227ENST00000486806 A0A1W2PQ64 194 aa10.79□□□□□ -0.68
MCF2L-227ENST00000486806 A0A1W2PQD8 194 aa10.79□□□□□ -0.68
MCF2L-227ENST00000486806 POTEFA5A3E0 1075 aa10.79□□□□□ -0.68
MCF2L-227ENST00000486806 NKRFO15226 690 aaKnown RBP eCLIP10.79□□□□□ -0.68
MCF2L-227ENST00000486806 MARCH6O60337 910 aa10.79□□□□□ -0.68
MCF2L-227ENST00000486806 GGPS1O95749 300 aa10.79□□□□□ -0.68
MCF2L-227ENST00000486806 INHAP05111 366 aa10.79□□□□□ -0.68
MCF2L-227ENST00000486806 TXNP10599 105 aaKnown RBP10.79□□□□□ -0.68
MCF2L-227ENST00000486806 AKR1A1P14550 325 aa10.79□□□□□ -0.68
MCF2L-227ENST00000486806 PTGS1P23219 599 aa10.79□□□□□ -0.68
MCF2L-227ENST00000486806 GRK4P32298 578 aa10.79□□□□□ -0.68
MCF2L-227ENST00000486806 MCM4P33991 863 aa10.79□□□□□ -0.68
MCF2L-227ENST00000486806 TECP42680 631 aa10.79□□□□□ -0.68
MCF2L-227ENST00000486806 KRT76Q01546 638 aa10.79□□□□□ -0.68
MCF2L-227ENST00000486806 ARHGAP1Q07960 439 aa10.79□□□□□ -0.68
MCF2L-227ENST00000486806 PDIA5Q14554 519 aa10.79□□□□□ -0.68
MCF2L-227ENST00000486806 CELF3Q5SZQ8 465 aaKnown RBP10.79□□□□□ -0.68
MCF2L-227ENST00000486806 RESP18Q5W5W9 173 aa10.79□□□□□ -0.68
MCF2L-227ENST00000486806 ADALQ6DHV7 355 aa10.79□□□□□ -0.68
MCF2L-227ENST00000486806 IQSEC1Q6DN90 963 aa10.79□□□□□ -0.68
MCF2L-227ENST00000486806 ZNF746Q6NUN9 644 aaPredicted RBP10.79□□□□□ -0.68
MCF2L-227ENST00000486806 COPS5Q92905 334 aa10.79□□□□□ -0.68
MCF2L-227ENST00000486806 RAB34Q9BZG1 259 aa10.79□□□□□ -0.68
MCF2L-227ENST00000486806 LMBRD1Q9NUN5 540 aa10.79□□□□□ -0.68
MCF2L-227ENST00000486806 SLC9A2Q9UBY0 812 aa10.79□□□□□ -0.68
MCF2L-227ENST00000486806 TELO2Q9Y4R8 837 aa10.79□□□□□ -0.68
MCF2L-227ENST00000486806 KIAA1217Q5T5P2 1943 aa10.78□□□□□ -0.68
MCF2L-227ENST00000486806 MCM3APO60318 1980 aa10.78□□□□□ -0.68
MCF2L-227ENST00000486806 PP2D1A8MPX8 630 aa10.78□□□□□ -0.68
MCF2L-227ENST00000486806 WDR64B1ANS9 1081 aa10.78□□□□□ -0.68
MCF2L-227ENST00000486806 DDX39AO00148 427 aaKnown RBP10.78□□□□□ -0.68
MCF2L-227ENST00000486806 EML1O00423 815 aa10.78□□□□□ -0.68
MCF2L-227ENST00000486806 SEPT4O43236 478 aa10.78□□□□□ -0.68
MCF2L-227ENST00000486806 CHMP2AO43633 222 aa10.78□□□□□ -0.68
MCF2L-227ENST00000486806 GADD45BO75293 160 aaPredicted RBP10.78□□□□□ -0.68
MCF2L-227ENST00000486806 PRPF40AO75400 957 aaKnown RBP10.78□□□□□ -0.68
MCF2L-227ENST00000486806 HOXD8P13378 290 aaPredicted RBP10.78□□□□□ -0.68
MCF2L-227ENST00000486806 CCND3P30281 292 aaPredicted RBP10.78□□□□□ -0.68
MCF2L-227ENST00000486806 UBE2HP62256 183 aa10.78□□□□□ -0.68
MCF2L-227ENST00000486806 TNFAIP2Q03169 654 aa10.78□□□□□ -0.68
MCF2L-227ENST00000486806 GJC2Q5T442 439 aaPredicted RBP10.78□□□□□ -0.68
MCF2L-227ENST00000486806 NCAPH2Q6IBW4 605 aa10.78□□□□□ -0.68
MCF2L-227ENST00000486806 USP49Q70CQ1 688 aa10.78□□□□□ -0.68
MCF2L-227ENST00000486806 CYFIP1Q7L576 1253 aa10.78□□□□□ -0.68
MCF2L-227ENST00000486806 SMAP1Q8IYB5 467 aaPredicted RBP10.78□□□□□ -0.68
MCF2L-227ENST00000486806 RDM1Q8NG50 284 aa10.78□□□□□ -0.68
MCF2L-227ENST00000486806 SYMPKQ92797 1274 aaKnown RBP10.78□□□□□ -0.68
MCF2L-227ENST00000486806 LENG1Q96BZ8 264 aaPredicted RBP10.78□□□□□ -0.68
MCF2L-227ENST00000486806 MMTAG2Q9BU76 263 aaKnown RBP10.78□□□□□ -0.68
MCF2L-227ENST00000486806 LRWD1Q9UFC0 647 aa10.78□□□□□ -0.68
MCF2L-227ENST00000486806 FAM184BQ9ULE4 1060 aa10.78□□□□□ -0.68
MCF2L-227ENST00000486806 HPSEQ9Y251 543 aa10.78□□□□□ -0.68
MCF2L-227ENST00000486806 Q9Y3F1 56 aa10.78□□□□□ -0.68
MCF2L-227ENST00000486806 CENPFP49454 3210 aa10.78□□□□□ -0.68
MCF2L-227ENST00000486806 IGKV6D-21A0A0A0MT36 114 aa10.77□□□□□ -0.69
MCF2L-227ENST00000486806 DDX11L8A8MPP1 907 aa10.77□□□□□ -0.69
MCF2L-227ENST00000486806 GOLGA6L22H0YM25 854 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms