RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 ZNF286BP0CG31 522 aa20.75■□□□□ 0.91
COL1A1-207ENST00000486572 ZNF76P36508 570 aa20.75■□□□□ 0.91
COL1A1-207ENST00000486572 MDM2Q00987 491 aaPredicted RBP20.75■□□□□ 0.91
COL1A1-207ENST00000486572 FAM47CQ5HY64 1035 aa20.75■□□□□ 0.91
COL1A1-207ENST00000486572 BLIDQ8IZY5 108 aa20.75■□□□□ 0.91
COL1A1-207ENST00000486572 CYP2W1Q8TAV3 490 aa20.75■□□□□ 0.91
COL1A1-207ENST00000486572 KAT2BQ92831 832 aa20.75■□□□□ 0.91
COL1A1-207ENST00000486572 TBC1D32Q96NH3 1257 aa20.75■□□□□ 0.91
COL1A1-207ENST00000486572 KCNH7Q9NS40 1196 aa20.75■□□□□ 0.91
COL1A1-207ENST00000486572 MEIS1O00470 390 aa20.74■□□□□ 0.91
COL1A1-207ENST00000486572 B4GALT4O60513 344 aa20.74■□□□□ 0.91
COL1A1-207ENST00000486572 RAG1P15918 1043 aa20.74■□□□□ 0.91
COL1A1-207ENST00000486572 CHMP4BP1P59074 171 aa20.74■□□□□ 0.91
COL1A1-207ENST00000486572 PTPN11Q06124 597 aaPredicted RBP20.74■□□□□ 0.91
COL1A1-207ENST00000486572 ST3GAL1Q11201 340 aa20.74■□□□□ 0.91
COL1A1-207ENST00000486572 NPY5RQ15761 445 aa20.74■□□□□ 0.91
COL1A1-207ENST00000486572 NIPA1Q7RTP0 329 aa20.74■□□□□ 0.91
COL1A1-207ENST00000486572 IL27Q8NEV9 243 aa20.74■□□□□ 0.91
COL1A1-207ENST00000486572 ZSCAN31Q96LW9 406 aaPredicted RBP20.74■□□□□ 0.91
COL1A1-207ENST00000486572 GPR20Q99678 358 aa20.74■□□□□ 0.91
COL1A1-207ENST00000486572 PHF20Q9BVI0 1012 aa20.74■□□□□ 0.91
COL1A1-207ENST00000486572 TRPV6Q9H1D0 765 aa20.74■□□□□ 0.91
COL1A1-207ENST00000486572 DOCK5Q9H7D0 1870 aa20.74■□□□□ 0.91
COL1A1-207ENST00000486572 PKD2L1Q9P0L9 805 aa20.74■□□□□ 0.91
COL1A1-207ENST00000486572 FAM86B1E9PN63 330 aa20.73■□□□□ 0.91
COL1A1-207ENST00000486572 ST18O60284 1047 aa20.73■□□□□ 0.91
COL1A1-207ENST00000486572 FAM86B2P0C5J1 330 aa20.73■□□□□ 0.91
COL1A1-207ENST00000486572 FDPSP14324 419 aaKnown RBP20.73■□□□□ 0.91
COL1A1-207ENST00000486572 BMP8BP34820 402 aa20.73■□□□□ 0.91
COL1A1-207ENST00000486572 SP4Q02446 784 aa20.73■□□□□ 0.91
COL1A1-207ENST00000486572 ALG1Q9BT22 464 aa20.73■□□□□ 0.91
COL1A1-207ENST00000486572 SH2B1Q9NRF2 756 aaPredicted RBP20.73■□□□□ 0.91
COL1A1-207ENST00000486572 KCNJ14Q9UNX9 436 aa20.73■□□□□ 0.91
COL1A1-207ENST00000486572 IGLV3-22A0A075B6J6 115 aa20.72■□□□□ 0.91
COL1A1-207ENST00000486572 M0R2N6 131 aa20.72■□□□□ 0.91
COL1A1-207ENST00000486572 JAK2O60674 1132 aa20.72■□□□□ 0.91
COL1A1-207ENST00000486572 LGALS2P05162 132 aa20.72■□□□□ 0.91
COL1A1-207ENST00000486572 SUPT20HL2P0C7V6 817 aa20.72■□□□□ 0.91
COL1A1-207ENST00000486572 ARP10275 920 aa20.72■□□□□ 0.91
COL1A1-207ENST00000486572 ITGB8P26012 769 aa20.72■□□□□ 0.91
COL1A1-207ENST00000486572 PSEN2P49810 448 aa20.72■□□□□ 0.91
COL1A1-207ENST00000486572 MFSD10Q14728 455 aa20.72■□□□□ 0.91
COL1A1-207ENST00000486572 SESTD1Q86VW0 696 aa20.72■□□□□ 0.91
COL1A1-207ENST00000486572 CCDC83Q8IWF9 413 aa20.72■□□□□ 0.91
COL1A1-207ENST00000486572 PPP1R13LQ8WUF5 828 aa20.72■□□□□ 0.91
COL1A1-207ENST00000486572 BADQ92934 168 aa20.72■□□□□ 0.91
COL1A1-207ENST00000486572 C16orf70Q9BSU1 422 aa20.72■□□□□ 0.91
COL1A1-207ENST00000486572 UBE2OQ9C0C9 1292 aaKnown RBP20.72■□□□□ 0.91
COL1A1-207ENST00000486572 AGO4Q9HCK5 861 aaKnown RBP20.72■□□□□ 0.91
COL1A1-207ENST00000486572 TRMT13Q9NUP7 481 aaKnown RBP20.72■□□□□ 0.91
COL1A1-207ENST00000486572 A0A1W2PPC1 479 aa20.71■□□□□ 0.91
COL1A1-207ENST00000486572 HAS3O00219 553 aa20.71■□□□□ 0.91
COL1A1-207ENST00000486572 TIMP1P01033 207 aa20.71■□□□□ 0.91
COL1A1-207ENST00000486572 CIITAP33076 1130 aa20.71■□□□□ 0.91
COL1A1-207ENST00000486572 SETQ01105 290 aaPredicted RBP20.71■□□□□ 0.91
COL1A1-207ENST00000486572 KIAA0753Q2KHM9 967 aa20.71■□□□□ 0.91
COL1A1-207ENST00000486572 HABP4Q5JVS0 413 aaKnown RBP20.71■□□□□ 0.91
COL1A1-207ENST00000486572 PLA2G4DQ86XP0 818 aa20.71■□□□□ 0.91
COL1A1-207ENST00000486572 C7orf31Q8N865 590 aa20.71■□□□□ 0.91
COL1A1-207ENST00000486572 SDF4Q9BRK5 362 aa20.71■□□□□ 0.91
COL1A1-207ENST00000486572 BACH2Q9BYV9 841 aa20.71■□□□□ 0.91
COL1A1-207ENST00000486572 JPH1Q9HDC5 661 aaPredicted RBP20.71■□□□□ 0.91
COL1A1-207ENST00000486572 GJB4Q9NTQ9 266 aa20.71■□□□□ 0.91
COL1A1-207ENST00000486572 TELO2Q9Y4R8 837 aa20.71■□□□□ 0.91
COL1A1-207ENST00000486572 NFASCO94856 1347 aa20.71■□□□□ 0.91
COL1A1-207ENST00000486572 H3BRB1 525 aa20.7■□□□□ 0.9
COL1A1-207ENST00000486572 KRT25Q7Z3Z0 450 aa20.7■□□□□ 0.9
COL1A1-207ENST00000486572 TBCKQ8TEA7 893 aa20.7■□□□□ 0.9
COL1A1-207ENST00000486572 LLPHQ9BRT6 129 aaKnown RBP20.7■□□□□ 0.9
COL1A1-207ENST00000486572 TUT1Q9H6E5 874 aaKnown RBP20.7■□□□□ 0.9
COL1A1-207ENST00000486572 TCF7P36402 384 aaPredicted RBP20.69■□□□□ 0.9
COL1A1-207ENST00000486572 USP11P51784 963 aa20.69■□□□□ 0.9
COL1A1-207ENST00000486572 ITGB3BPQ13352 177 aaPredicted RBP20.69■□□□□ 0.9
COL1A1-207ENST00000486572 NONOQ15233 471 aaKnown RBP eCLIP20.69■□□□□ 0.9
COL1A1-207ENST00000486572 PRR16Q569H4 304 aa20.69■□□□□ 0.9
COL1A1-207ENST00000486572 SEPT1Q8WYJ6 367 aa20.69■□□□□ 0.9
COL1A1-207ENST00000486572 PPP1R12CQ9BZL4 782 aa20.69■□□□□ 0.9
COL1A1-207ENST00000486572 HIPK3Q9H422 1215 aa20.69■□□□□ 0.9
COL1A1-207ENST00000486572 SLC9A2Q9UBY0 812 aa20.69■□□□□ 0.9
COL1A1-207ENST00000486572 GTF2IRD1Q9UHL9 959 aa20.69■□□□□ 0.9
COL1A1-207ENST00000486572 ZNF215Q9UL58 517 aaPredicted RBP20.69■□□□□ 0.9
COL1A1-207ENST00000486572 NOD1Q9Y239 953 aa20.69■□□□□ 0.9
COL1A1-207ENST00000486572 FPGSQ05932 587 aa20.68■□□□□ 0.9
COL1A1-207ENST00000486572 UTP14CQ5TAP6 766 aaKnown RBP20.68■□□□□ 0.9
COL1A1-207ENST00000486572 MFSD5Q6N075 450 aa20.68■□□□□ 0.9
COL1A1-207ENST00000486572 TRIM50Q86XT4 487 aa20.68■□□□□ 0.9
COL1A1-207ENST00000486572 NOC4LQ9BVI4 516 aaKnown RBP20.68■□□□□ 0.9
COL1A1-207ENST00000486572 HDAC6Q9UBN7 1215 aa20.68■□□□□ 0.9
COL1A1-207ENST00000486572 RANBP2P49792 3224 aaKnown RBP20.68■□□□□ 0.9
COL1A1-207ENST00000486572 CCDC194A0A1B0GVG4 234 aa20.67■□□□□ 0.9
COL1A1-207ENST00000486572 GSTTP1A0A1W2PQM5 241 aa20.67■□□□□ 0.9
COL1A1-207ENST00000486572 IPO5O00410 1097 aaKnown RBP20.67■□□□□ 0.9
COL1A1-207ENST00000486572 CYP2C9P11712 490 aa20.67■□□□□ 0.9
COL1A1-207ENST00000486572 TRIM29Q14134 588 aa20.67■□□□□ 0.9
COL1A1-207ENST00000486572 PTGISQ16647 500 aa20.67■□□□□ 0.9
COL1A1-207ENST00000486572 GDF6Q6KF10 455 aaPredicted RBP20.67■□□□□ 0.9
COL1A1-207ENST00000486572 TDHQ8IZJ6 230 aa20.67■□□□□ 0.9
COL1A1-207ENST00000486572 LENG9Q96B70 501 aa20.67■□□□□ 0.9
COL1A1-207ENST00000486572 ZNF577Q9BSK1 485 aa20.67■□□□□ 0.9
COL1A1-207ENST00000486572 BRMS1Q9HCU9 246 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms