RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 CT47A1Q5JQC4 288 aaPredicted RBP7.23□□□□□ -1.25
USP41-204ENST00000486536 AXDND1Q5T1B0 1012 aaPredicted RBP7.23□□□□□ -1.25
USP41-204ENST00000486536 SUSD4Q5VX71 490 aa7.23□□□□□ -1.25
USP41-204ENST00000486536 DDX42Q86XP3 938 aaKnown RBP eCLIP7.23□□□□□ -1.25
USP41-204ENST00000486536 UBR7Q8N806 425 aa7.23□□□□□ -1.25
USP41-204ENST00000486536 KCT2Q8NC54 265 aa7.23□□□□□ -1.25
USP41-204ENST00000486536 FAM89AQ96GI7 184 aa7.23□□□□□ -1.25
USP41-204ENST00000486536 FGD4Q96M96 766 aa7.23□□□□□ -1.25
USP41-204ENST00000486536 HAUS7Q99871 368 aa7.23□□□□□ -1.25
USP41-204ENST00000486536 AARSD1Q9BTE6 412 aaKnown RBP7.23□□□□□ -1.25
USP41-204ENST00000486536 NYXQ9GZU5 481 aa7.23□□□□□ -1.25
USP41-204ENST00000486536 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.23□□□□□ -1.25
USP41-204ENST00000486536 ATXN3LQ9H3M9 355 aa7.23□□□□□ -1.25
USP41-204ENST00000486536 LY75O60449 1722 aa7.23□□□□□ -1.25
USP41-204ENST00000486536 USP42Q9H9J4 1324 aaKnown RBP7.23□□□□□ -1.25
USP41-204ENST00000486536 ARFGEF2Q9Y6D5 1785 aa7.23□□□□□ -1.25
USP41-204ENST00000486536 COL5A3P25940 1745 aaPredicted RBP7.22□□□□□ -1.25
USP41-204ENST00000486536 MEGF11A6BM72 1044 aa7.22□□□□□ -1.25
USP41-204ENST00000486536 SPDYE3A6NKU9 549 aa7.22□□□□□ -1.25
USP41-204ENST00000486536 OIP5O43482 229 aa7.22□□□□□ -1.25
USP41-204ENST00000486536 CST3P01034 146 aaPredicted RBP7.22□□□□□ -1.25
USP41-204ENST00000486536 SOX5P35711 763 aa7.22□□□□□ -1.25
USP41-204ENST00000486536 PPP2R2AP63151 447 aa7.22□□□□□ -1.25
USP41-204ENST00000486536 OS9Q13438 667 aaPredicted RBP7.22□□□□□ -1.25
USP41-204ENST00000486536 CCDC57Q2TAC2 916 aa7.22□□□□□ -1.25
USP41-204ENST00000486536 BMP2KLQ5H9B9 411 aa7.22□□□□□ -1.25
USP41-204ENST00000486536 SLC10A5Q5PT55 438 aa7.22□□□□□ -1.25
USP41-204ENST00000486536 ADAT2Q7Z6V5 191 aaKnown RBP7.22□□□□□ -1.25
USP41-204ENST00000486536 SKAP1Q86WV1 359 aa7.22□□□□□ -1.25
USP41-204ENST00000486536 CCDC144CPQ8IYA2 1237 aa7.22□□□□□ -1.25
USP41-204ENST00000486536 CLASRPQ8N2M8 674 aaKnown RBP7.22□□□□□ -1.25
USP41-204ENST00000486536 DTWD1Q8N5C7 304 aa7.22□□□□□ -1.25
USP41-204ENST00000486536 CEP89Q96ST8 783 aa7.22□□□□□ -1.25
USP41-204ENST00000486536 AOX1Q06278 1338 aa7.22□□□□□ -1.25
USP41-204ENST00000486536 PRODHO43272 600 aa7.21□□□□□ -1.26
USP41-204ENST00000486536 CIAO1O76071 339 aa7.21□□□□□ -1.26
USP41-204ENST00000486536 VSIG8P0DPA2 414 aa7.21□□□□□ -1.26
USP41-204ENST00000486536 CAP2P40123 477 aa7.21□□□□□ -1.26
USP41-204ENST00000486536 IL15P40933 162 aaPredicted RBP7.21□□□□□ -1.26
USP41-204ENST00000486536 CTSWP56202 376 aa7.21□□□□□ -1.26
USP41-204ENST00000486536 IFIT5Q13325 482 aaKnown RBP7.21□□□□□ -1.26
USP41-204ENST00000486536 TTLL4Q14679 1199 aa7.21□□□□□ -1.26
USP41-204ENST00000486536 PRAMEF13Q5VWM6 474 aa7.21□□□□□ -1.26
USP41-204ENST00000486536 TBC1D9BQ66K14 1250 aa7.21□□□□□ -1.26
USP41-204ENST00000486536 UBE3DQ7Z6J8 389 aa7.21□□□□□ -1.26
USP41-204ENST00000486536 ZNF513Q8N8E2 541 aaPredicted RBP7.21□□□□□ -1.26
USP41-204ENST00000486536 TTLL11Q8NHH1 800 aa7.21□□□□□ -1.26
USP41-204ENST00000486536 CYB5D2Q8WUJ1 264 aa7.21□□□□□ -1.26
USP41-204ENST00000486536 JDP2Q8WYK2 163 aa7.21□□□□□ -1.26
USP41-204ENST00000486536 ZNF512BQ96KM6 892 aaPredicted RBP7.21□□□□□ -1.26
USP41-204ENST00000486536 LGR4Q9BXB1 951 aa7.21□□□□□ -1.26
USP41-204ENST00000486536 KLHL25Q9H0H3 589 aa7.21□□□□□ -1.26
USP41-204ENST00000486536 GPR108Q9NPR9 543 aa7.21□□□□□ -1.26
USP41-204ENST00000486536 APEX2Q9UBZ4 518 aa7.21□□□□□ -1.26
USP41-204ENST00000486536 STAP2Q9UGK3 403 aa7.21□□□□□ -1.26
USP41-204ENST00000486536 AP4E1Q9UPM8 1137 aa7.21□□□□□ -1.26
USP41-204ENST00000486536 PA2G4Q9UQ80 394 aaKnown RBP7.21□□□□□ -1.26
USP41-204ENST00000486536 SALL3Q9BXA9 1300 aa7.21□□□□□ -1.26
USP41-204ENST00000486536 C4BP0C0L5 1744 aa7.21□□□□□ -1.26
USP41-204ENST00000486536 RTL9Q8NET4 1388 aa7.2□□□□□ -1.26
USP41-204ENST00000486536 SBF2Q86WG5 1849 aa7.2□□□□□ -1.26
USP41-204ENST00000486536 ANKRD18BA2A2Z9 1011 aa7.2□□□□□ -1.26
USP41-204ENST00000486536 SHISA8B8ZZ34 492 aa7.2□□□□□ -1.26
USP41-204ENST00000486536 EYA2O00167 538 aa7.2□□□□□ -1.26
USP41-204ENST00000486536 CBFA2T2O43439 604 aa7.2□□□□□ -1.26
USP41-204ENST00000486536 EIF5BO60841 1220 aaKnown RBP7.2□□□□□ -1.26
USP41-204ENST00000486536 RNGTTO60942 597 aaKnown RBP7.2□□□□□ -1.26
USP41-204ENST00000486536 SASH1O94885 1247 aa7.2□□□□□ -1.26
USP41-204ENST00000486536 FGFR1P11362 822 aa7.2□□□□□ -1.26
USP41-204ENST00000486536 PABPC1P11940 636 aaKnown RBP7.2□□□□□ -1.26
USP41-204ENST00000486536 MX1P20591 662 aa7.2□□□□□ -1.26
USP41-204ENST00000486536 AMPD1P23109 780 aa7.2□□□□□ -1.26
USP41-204ENST00000486536 PDE1AP54750 535 aa7.2□□□□□ -1.26
USP41-204ENST00000486536 SF3B3Q15393 1217 aaKnown RBP7.2□□□□□ -1.26
USP41-204ENST00000486536 CCDC152Q4G0S7 254 aa7.2□□□□□ -1.26
USP41-204ENST00000486536 ANKRD39Q53RE8 183 aa7.2□□□□□ -1.26
USP41-204ENST00000486536 DCAF15Q66K64 600 aa7.2□□□□□ -1.26
USP41-204ENST00000486536 NSMFQ6X4W1 530 aa7.2□□□□□ -1.26
USP41-204ENST00000486536 DYMQ7RTS9 669 aa7.2□□□□□ -1.26
USP41-204ENST00000486536 RNF180Q86T96 592 aa7.2□□□□□ -1.26
USP41-204ENST00000486536 AMIGO3Q86WK7 504 aa7.2□□□□□ -1.26
USP41-204ENST00000486536 ZNF227Q86WZ6 799 aa7.2□□□□□ -1.26
USP41-204ENST00000486536 FBXO11Q86XK2 927 aa7.2□□□□□ -1.26
USP41-204ENST00000486536 C16orf71Q8IYS4 520 aaPredicted RBP7.2□□□□□ -1.26
USP41-204ENST00000486536 ISL2Q96A47 359 aa7.2□□□□□ -1.26
USP41-204ENST00000486536 MRPL4Q9BYD3 311 aaKnown RBP7.2□□□□□ -1.26
USP41-204ENST00000486536 CYP4F12Q9HCS2 524 aa7.2□□□□□ -1.26
USP41-204ENST00000486536 SSU72Q9NP77 194 aaKnown RBP7.2□□□□□ -1.26
USP41-204ENST00000486536 TFCP2L1Q9NZI6 479 aa7.2□□□□□ -1.26
USP41-204ENST00000486536 SRP68Q9UHB9 627 aaKnown RBP7.2□□□□□ -1.26
USP41-204ENST00000486536 MAPRE3Q9UPY8 281 aa7.2□□□□□ -1.26
USP41-204ENST00000486536 ZNF451Q9Y4E5 1061 aa7.2□□□□□ -1.26
USP41-204ENST00000486536 TTC41PQ6P2S7 1318 aa7.2□□□□□ -1.26
USP41-204ENST00000486536 CARMIL3Q8ND23 1372 aa7.2□□□□□ -1.26
USP41-204ENST00000486536 DNAJC25-GNG10A0A024R161 153 aa7.19□□□□□ -1.26
USP41-204ENST00000486536 GSG1L2A8MUP6 293 aa7.19□□□□□ -1.26
USP41-204ENST00000486536 DLL1O00548 723 aa7.19□□□□□ -1.26
USP41-204ENST00000486536 NOP56O00567 594 aaKnown RBP7.19□□□□□ -1.26
USP41-204ENST00000486536 PPM1BO75688 479 aa7.19□□□□□ -1.26
USP41-204ENST00000486536 WISP1O95388 367 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms