RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 FAM184BQ9ULE4 1060 aa10.19□□□□□ -0.78
COL12A1-208ENST00000486533 NEDD4P46934 1319 aa10.19□□□□□ -0.78
COL12A1-208ENST00000486533 FRMPD2Q68DX3 1309 aaPredicted RBP10.19□□□□□ -0.78
COL12A1-208ENST00000486533 SOX1O00570 391 aaPredicted RBP10.18□□□□□ -0.78
COL12A1-208ENST00000486533 NOVP48745 357 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 METAP2P50579 478 aaKnown RBP eCLIP10.18□□□□□ -0.78
COL12A1-208ENST00000486533 RCAN1P53805 252 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 CNTN2Q02246 1040 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 ACVR2BQ13705 512 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 TKFCQ3LXA3 575 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 ARMCX2Q7L311 632 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 DHX40Q8IX18 779 aaKnown RBP10.18□□□□□ -0.78
COL12A1-208ENST00000486533 CCDC144CPQ8IYA2 1237 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 C17orf53Q8N3J3 647 aaPredicted RBP10.18□□□□□ -0.78
COL12A1-208ENST00000486533 OXER1Q8TDS5 423 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 CACTINQ8WUQ7 758 aaKnown RBP10.18□□□□□ -0.78
COL12A1-208ENST00000486533 ESR2Q92731 530 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 LRCH3Q96II8 777 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 KRT23Q9C075 422 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 ABHD16BQ9H3Z7 469 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 GOLPH3LQ9H4A5 285 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 GPCPD1Q9NPB8 672 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 TCP11L1Q9NUJ3 509 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 CCPG1Q9ULG6 757 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 PHF24Q9UPV7 400 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 SYNRGQ9UMZ2 1314 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 CCDC196A0A1B0GTZ2 297 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 GOLGA6L9A6NEM1 432 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 CUTAO60888 179 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 ICAM1P05362 532 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 FOSBP53539 338 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 SLC39A14Q15043 492 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 CCDC144BQ3MJ40 725 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 SYDE2Q5VT97 1194 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 TTBK2Q6IQ55 1244 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 NSMFQ6X4W1 530 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 FCHSD1Q86WN1 690 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 TMTC2Q8N394 836 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 FGD4Q96M96 766 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 ZKSCAN3Q9BRR0 538 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 NCOA5Q9HCD5 579 aaKnown RBP10.18□□□□□ -0.78
COL12A1-208ENST00000486533 CEP131Q9UPN4 1083 aa10.18□□□□□ -0.78
COL12A1-208ENST00000486533 NID2Q14112 1375 aa10.17□□□□□ -0.78
COL12A1-208ENST00000486533 FAM237AA0A1B0GTK4 181 aa10.17□□□□□ -0.78
COL12A1-208ENST00000486533 A0A1W2PQ45 241 aaPredicted RBP10.17□□□□□ -0.78
COL12A1-208ENST00000486533 A0A1W2PQY0 241 aa10.17□□□□□ -0.78
COL12A1-208ENST00000486533 ADAMTS4O75173 837 aa10.17□□□□□ -0.78
COL12A1-208ENST00000486533 DUSP11O75319 330 aaKnown RBP10.17□□□□□ -0.78
COL12A1-208ENST00000486533 ZNF202O95125 648 aa10.17□□□□□ -0.78
COL12A1-208ENST00000486533 SMC2O95347 1197 aa10.17□□□□□ -0.78
COL12A1-208ENST00000486533 C6orf222P0C671 652 aaPredicted RBP10.17□□□□□ -0.78
COL12A1-208ENST00000486533 PDHBP11177 359 aa10.17□□□□□ -0.78
COL12A1-208ENST00000486533 SYKP43405 635 aa10.17□□□□□ -0.78
COL12A1-208ENST00000486533 FAM193AP78312 1265 aa10.17□□□□□ -0.78
COL12A1-208ENST00000486533 SNX17Q15036 470 aa10.17□□□□□ -0.78
COL12A1-208ENST00000486533 PPP2R5BQ15173 497 aa10.17□□□□□ -0.78
COL12A1-208ENST00000486533 MUM1L1Q5H9M0 696 aa10.17□□□□□ -0.78
COL12A1-208ENST00000486533 PPP1R15BQ5SWA1 713 aa10.17□□□□□ -0.78
COL12A1-208ENST00000486533 KANK3Q6NY19 840 aa10.17□□□□□ -0.78
COL12A1-208ENST00000486533 NFXL1Q6ZNB6 911 aa10.17□□□□□ -0.78
COL12A1-208ENST00000486533 IQCA1Q86XH1 822 aa10.17□□□□□ -0.78
COL12A1-208ENST00000486533 TRIM22Q8IYM9 498 aa10.17□□□□□ -0.78
COL12A1-208ENST00000486533 FAM133AQ8N9E0 248 aa10.17□□□□□ -0.78
COL12A1-208ENST00000486533 ZNF397Q8NF99 534 aaPredicted RBP10.17□□□□□ -0.78
COL12A1-208ENST00000486533 ALG1Q9BT22 464 aa10.17□□□□□ -0.78
COL12A1-208ENST00000486533 RANBP17Q9H2T7 1088 aaKnown RBP10.17□□□□□ -0.78
COL12A1-208ENST00000486533 SPC25Q9HBM1 224 aa10.17□□□□□ -0.78
COL12A1-208ENST00000486533 OGFRQ9NZT2 677 aa10.17□□□□□ -0.78
COL12A1-208ENST00000486533 LTBP2Q14767 1821 aa10.16□□□□□ -0.78
COL12A1-208ENST00000486533 ERICH2A1L162 156 aa10.16□□□□□ -0.78
COL12A1-208ENST00000486533 SOWAHBA6NEL2 793 aa10.16□□□□□ -0.78
COL12A1-208ENST00000486533 ASB14A6NK59 587 aa10.16□□□□□ -0.78
COL12A1-208ENST00000486533 B4E1Z4 1266 aa10.16□□□□□ -0.78
COL12A1-208ENST00000486533 SH2B2O14492 632 aaPredicted RBP10.16□□□□□ -0.78
COL12A1-208ENST00000486533 ARHGAP33O14559 1287 aa10.16□□□□□ -0.78
COL12A1-208ENST00000486533 ZBTB43O43298 467 aa10.16□□□□□ -0.78
COL12A1-208ENST00000486533 ZSCAN12O43309 604 aa10.16□□□□□ -0.78
COL12A1-208ENST00000486533 PQBP1O60828 265 aaKnown RBP10.16□□□□□ -0.78
COL12A1-208ENST00000486533 TPM1P09493 284 aa10.16□□□□□ -0.78
COL12A1-208ENST00000486533 FDPSP14324 419 aaKnown RBP10.16□□□□□ -0.78
COL12A1-208ENST00000486533 LIFRP42702 1097 aa10.16□□□□□ -0.78
COL12A1-208ENST00000486533 ACLYP53396 1101 aa10.16□□□□□ -0.78
COL12A1-208ENST00000486533 GUCY1B3Q02153 619 aa10.16□□□□□ -0.78
COL12A1-208ENST00000486533 TLE2Q04725 743 aa10.16□□□□□ -0.78
COL12A1-208ENST00000486533 ZNF543Q08ER8 600 aa10.16□□□□□ -0.78
COL12A1-208ENST00000486533 LRMPQ12912 555 aa10.16□□□□□ -0.78
COL12A1-208ENST00000486533 CT47A1Q5JQC4 288 aaPredicted RBP10.16□□□□□ -0.78
COL12A1-208ENST00000486533 BTNL9Q6UXG8 535 aa10.16□□□□□ -0.78
COL12A1-208ENST00000486533 FILIP1Q7Z7B0 1213 aa10.16□□□□□ -0.78
COL12A1-208ENST00000486533 SGMS1Q86VZ5 419 aa10.16□□□□□ -0.78
COL12A1-208ENST00000486533 CREBRFQ8IUR6 639 aa10.16□□□□□ -0.78
COL12A1-208ENST00000486533 CCAR2Q8N163 923 aaKnown RBP10.16□□□□□ -0.78
COL12A1-208ENST00000486533 NUP133Q8WUM0 1156 aa10.16□□□□□ -0.78
COL12A1-208ENST00000486533 SRRTQ9BXP5 876 aaKnown RBP10.16□□□□□ -0.78
COL12A1-208ENST00000486533 ZMYND15Q9H091 742 aa10.16□□□□□ -0.78
COL12A1-208ENST00000486533 STARD7Q9NQZ5 370 aa10.16□□□□□ -0.78
COL12A1-208ENST00000486533 PDLIM7Q9NR12 457 aa10.16□□□□□ -0.78
COL12A1-208ENST00000486533 CYP39A1Q9NYL5 469 aa10.16□□□□□ -0.78
COL12A1-208ENST00000486533 A0A1B0GVL5 298 aa10.15□□□□□ -0.78
COL12A1-208ENST00000486533 MYADML2A6NDP7 307 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms