RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 THPOP40225 353 aa11.54□□□□□ -0.56
SND1-213ENST00000486037 PDE1AP54750 535 aa11.54□□□□□ -0.56
SND1-213ENST00000486037 RPS6P62753 249 aaKnown RBP11.54□□□□□ -0.56
SND1-213ENST00000486037 PWP2Q15269 919 aaKnown RBP11.54□□□□□ -0.56
SND1-213ENST00000486037 KIAA0753Q2KHM9 967 aa11.54□□□□□ -0.56
SND1-213ENST00000486037 RCSD1Q6JBY9 416 aa11.54□□□□□ -0.56
SND1-213ENST00000486037 FIBCD1Q8N539 461 aa11.54□□□□□ -0.56
SND1-213ENST00000486037 C11orf84Q9BUA3 381 aaPredicted RBP11.54□□□□□ -0.56
SND1-213ENST00000486037 NMT2O60551 498 aa11.53□□□□□ -0.56
SND1-213ENST00000486037 F2P00734 622 aa11.53□□□□□ -0.56
SND1-213ENST00000486037 RB1P06400 928 aa11.53□□□□□ -0.56
SND1-213ENST00000486037 CTSHP09668 335 aa11.53□□□□□ -0.56
SND1-213ENST00000486037 GSPT1P15170 499 aaKnown RBP11.53□□□□□ -0.56
SND1-213ENST00000486037 MX1P20591 662 aa11.53□□□□□ -0.56
SND1-213ENST00000486037 SP100P23497 879 aaPredicted RBP11.53□□□□□ -0.56
SND1-213ENST00000486037 C8orf34Q49A92 452 aa11.53□□□□□ -0.56
SND1-213ENST00000486037 TTC22Q5TAA0 569 aa11.53□□□□□ -0.56
SND1-213ENST00000486037 TSHZ3Q63HK5 1081 aa11.53□□□□□ -0.56
SND1-213ENST00000486037 RNF207Q6ZRF8 634 aa11.53□□□□□ -0.56
SND1-213ENST00000486037 SEPT14Q6ZU15 432 aa11.53□□□□□ -0.56
SND1-213ENST00000486037 DGLUCYQ7Z3D6 616 aa11.53□□□□□ -0.56
SND1-213ENST00000486037 RBM23Q86U06 439 aaKnown RBP11.53□□□□□ -0.56
SND1-213ENST00000486037 EFHBQ8N7U6 833 aa11.53□□□□□ -0.56
SND1-213ENST00000486037 VN1R2Q8NFZ6 395 aa11.53□□□□□ -0.56
SND1-213ENST00000486037 IL17RAQ96F46 866 aa11.53□□□□□ -0.56
SND1-213ENST00000486037 OSBPL3Q9H4L5 887 aa11.53□□□□□ -0.56
SND1-213ENST00000486037 TSHZ2Q9NRE2 1034 aa11.53□□□□□ -0.56
SND1-213ENST00000486037 EMSYQ7Z589 1322 aa11.53□□□□□ -0.56
SND1-213ENST00000486037 ACACBO00763 2458 aa11.52□□□□□ -0.56
SND1-213ENST00000486037 KIAA1671Q9BY89 1806 aa11.52□□□□□ -0.57
SND1-213ENST00000486037 GH1P01241 217 aa11.52□□□□□ -0.57
SND1-213ENST00000486037 TSPY3P0CV98 308 aa11.52□□□□□ -0.57
SND1-213ENST00000486037 TSPY8P0CW00 308 aa11.52□□□□□ -0.57
SND1-213ENST00000486037 CASTP20810 708 aaKnown RBP11.52□□□□□ -0.57
SND1-213ENST00000486037 NRIP1P48552 1158 aa11.52□□□□□ -0.57
SND1-213ENST00000486037 NUBP1P53384 320 aa11.52□□□□□ -0.57
SND1-213ENST00000486037 TFAP4Q01664 338 aa11.52□□□□□ -0.57
SND1-213ENST00000486037 BMP2KLQ5H9B9 411 aa11.52□□□□□ -0.57
SND1-213ENST00000486037 SERINC5Q86VE9 423 aa11.52□□□□□ -0.57
SND1-213ENST00000486037 CLASRPQ8N2M8 674 aaKnown RBP11.52□□□□□ -0.57
SND1-213ENST00000486037 SUSD6Q92537 303 aa11.52□□□□□ -0.57
SND1-213ENST00000486037 SEPT8Q92599 483 aa11.52□□□□□ -0.57
SND1-213ENST00000486037 CLP1Q92989 425 aaKnown RBP11.52□□□□□ -0.57
SND1-213ENST00000486037 OSBP2Q969R2 916 aa11.52□□□□□ -0.57
SND1-213ENST00000486037 HAUS7Q99871 368 aa11.52□□□□□ -0.57
SND1-213ENST00000486037 BACH2Q9BYV9 841 aa11.52□□□□□ -0.57
SND1-213ENST00000486037 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.52□□□□□ -0.572e-15■■□□□ 14.4
SND1-213ENST00000486037 IL17RBQ9NRM6 502 aa11.52□□□□□ -0.57
SND1-213ENST00000486037 PLAGL2Q9UPG8 496 aa11.52□□□□□ -0.57
SND1-213ENST00000486037 ADGRA3Q8IWK6 1321 aa11.52□□□□□ -0.57
SND1-213ENST00000486037 BAHCC1Q9P281 2608 aa11.52□□□□□ -0.57
SND1-213ENST00000486037 CEP250Q9BV73 2442 aa11.51□□□□□ -0.57
SND1-213ENST00000486037 SORBS3O60504 671 aa11.51□□□□□ -0.57
SND1-213ENST00000486037 ITGB1P05556 798 aa11.51□□□□□ -0.57
SND1-213ENST00000486037 DGKDQ16760 1214 aa11.51□□□□□ -0.57
SND1-213ENST00000486037 TBC1D5Q92609 795 aa11.51□□□□□ -0.57
SND1-213ENST00000486037 CDH22Q9UJ99 828 aa11.51□□□□□ -0.57
SND1-213ENST00000486037 SPTBN2O15020 2390 aa11.5□□□□□ -0.57
SND1-213ENST00000486037 TREHO43280 583 aa11.5□□□□□ -0.57
SND1-213ENST00000486037 BRD1O95696 1058 aa11.5□□□□□ -0.57
SND1-213ENST00000486037 IFIT2P09913 472 aaKnown RBP11.5□□□□□ -0.57
SND1-213ENST00000486037 ATP5JP18859 108 aa11.5□□□□□ -0.57
SND1-213ENST00000486037 CCDC96Q2M329 555 aa11.5□□□□□ -0.57
SND1-213ENST00000486037 SYDE2Q5VT97 1194 aa11.5□□□□□ -0.57
SND1-213ENST00000486037 GIMAP6Q6P9H5 292 aa11.5□□□□□ -0.57
SND1-213ENST00000486037 DHX37Q8IY37 1157 aaKnown RBP11.5□□□□□ -0.57
SND1-213ENST00000486037 KREMEN2Q8NCW0 462 aa11.5□□□□□ -0.57
SND1-213ENST00000486037 DNERQ8NFT8 737 aa11.5□□□□□ -0.57
SND1-213ENST00000486037 PI4K2BQ8TCG2 481 aa11.5□□□□□ -0.57
SND1-213ENST00000486037 SPPL3Q8TCT6 385 aa11.5□□□□□ -0.57
SND1-213ENST00000486037 ZNF689Q96CS4 500 aaPredicted RBP11.5□□□□□ -0.57
SND1-213ENST00000486037 COL20A1Q9P218 1284 aa11.5□□□□□ -0.57
SND1-213ENST00000486037 STX8Q9UNK0 236 aa11.5□□□□□ -0.57
SND1-213ENST00000486037 FRMPD2Q68DX3 1309 aaPredicted RBP11.5□□□□□ -0.57
SND1-213ENST00000486037 KIAA1217Q5T5P2 1943 aa11.5□□□□□ -0.57
SND1-213ENST00000486037 MYO10Q9HD67 2058 aa11.5□□□□□ -0.57
SND1-213ENST00000486037 MYH7BA7E2Y1 1941 aa11.49□□□□□ -0.57
SND1-213ENST00000486037 M0R2C6 588 aa11.49□□□□□ -0.57
SND1-213ENST00000486037 PER2O15055 1255 aa11.49□□□□□ -0.57
SND1-213ENST00000486037 TDO2P48775 406 aa11.49□□□□□ -0.57
SND1-213ENST00000486037 BTNL9Q6UXG8 535 aa11.49□□□□□ -0.57
SND1-213ENST00000486037 KIAA2013Q8IYS2 634 aa11.49□□□□□ -0.57
SND1-213ENST00000486037 TAAR1Q96RJ0 339 aa11.49□□□□□ -0.57
SND1-213ENST00000486037 KATNAL1Q9BW62 490 aa11.49□□□□□ -0.57
SND1-213ENST00000486037 APOL5Q9BWW9 433 aa11.49□□□□□ -0.57
SND1-213ENST00000486037 DDX41Q9UJV9 622 aaKnown RBP11.49□□□□□ -0.57
SND1-213ENST00000486037 MRPL42Q9Y6G3 142 aaKnown RBP11.49□□□□□ -0.57
SND1-213ENST00000486037 CHD6Q8TD26 2715 aa11.49□□□□□ -0.57
SND1-213ENST00000486037 PLXNA4Q9HCM2 1894 aa11.49□□□□□ -0.57
SND1-213ENST00000486037 MAP1BP46821 2468 aaKnown RBP11.48□□□□□ -0.57
SND1-213ENST00000486037 GPAA1O43292 621 aa11.48□□□□□ -0.57
SND1-213ENST00000486037 HOXD8P13378 290 aaPredicted RBP11.48□□□□□ -0.57
SND1-213ENST00000486037 ATF7P17544 494 aaPredicted RBP11.48□□□□□ -0.57
SND1-213ENST00000486037 SDSP20132 328 aa11.48□□□□□ -0.57
SND1-213ENST00000486037 HOXC8P31273 242 aa11.48□□□□□ -0.57
SND1-213ENST00000486037 PLCB2Q00722 1185 aa11.48□□□□□ -0.57
SND1-213ENST00000486037 ZBTB33Q86T24 672 aa11.48□□□□□ -0.57
SND1-213ENST00000486037 KLHL23Q8NBE8 558 aa11.48□□□□□ -0.57
SND1-213ENST00000486037 PPTC7Q8NI37 304 aa11.48□□□□□ -0.57
SND1-213ENST00000486037 ATP8B4Q8TF62 1192 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms