RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 SLKQ9H2G2 1235 aaPredicted RBP13.76□□□□□ -0.21
HLA-DOA-204ENST00000485901 UPF2Q9HAU5 1272 aaKnown RBP13.76□□□□□ -0.21
HLA-DOA-204ENST00000485901 SCN5AQ14524 2016 aa13.75□□□□□ -0.21
HLA-DOA-204ENST00000485901 MEIS2O14770 477 aa13.75□□□□□ -0.21
HLA-DOA-204ENST00000485901 IQCF3P0C7M6 154 aa13.75□□□□□ -0.21
HLA-DOA-204ENST00000485901 SCG2P13521 617 aa13.75□□□□□ -0.21
HLA-DOA-204ENST00000485901 AK2P54819 239 aa13.75□□□□□ -0.21
HLA-DOA-204ENST00000485901 NAPAP54920 295 aa13.75□□□□□ -0.21
HLA-DOA-204ENST00000485901 PSMC6P62333 389 aa13.75□□□□□ -0.21
HLA-DOA-204ENST00000485901 CCDC85BQ15834 202 aaPredicted RBP13.75□□□□□ -0.21
HLA-DOA-204ENST00000485901 NTRK3Q16288 839 aa13.75□□□□□ -0.21
HLA-DOA-204ENST00000485901 WWC2Q6AWC2 1192 aa13.75□□□□□ -0.21
HLA-DOA-204ENST00000485901 PPP1R18Q6NYC8 613 aa13.75□□□□□ -0.21
HLA-DOA-204ENST00000485901 USP17L6PQ6QN14 398 aa13.75□□□□□ -0.21
HLA-DOA-204ENST00000485901 VSIG10LQ86VR7 867 aa13.75□□□□□ -0.21
HLA-DOA-204ENST00000485901 TRIM22Q8IYM9 498 aa13.75□□□□□ -0.21
HLA-DOA-204ENST00000485901 OR6J1Q8NGC5 347 aa13.75□□□□□ -0.21
HLA-DOA-204ENST00000485901 GPKOWQ92917 476 aaPredicted RBP eCLIP13.75□□□□□ -0.21
HLA-DOA-204ENST00000485901 PDCD2LQ9BRP1 358 aa13.75□□□□□ -0.21
HLA-DOA-204ENST00000485901 RNF26Q9BY78 433 aaPredicted RBP13.75□□□□□ -0.21
HLA-DOA-204ENST00000485901 NCOA5Q9HCD5 579 aaKnown RBP13.75□□□□□ -0.21
HLA-DOA-204ENST00000485901 BARHL2Q9NY43 387 aa13.75□□□□□ -0.21
HLA-DOA-204ENST00000485901 MTCH2Q9Y6C9 303 aa13.75□□□□□ -0.21
HLA-DOA-204ENST00000485901 TANC1Q9C0D5 1861 aa13.75□□□□□ -0.21
HLA-DOA-204ENST00000485901 EFCAB14O75071 495 aa13.74□□□□□ -0.21
HLA-DOA-204ENST00000485901 TXNP10599 105 aaKnown RBP13.74□□□□□ -0.21
HLA-DOA-204ENST00000485901 MYCLP12524 364 aaPredicted RBP13.74□□□□□ -0.21
HLA-DOA-204ENST00000485901 CCND2P30279 289 aa13.74□□□□□ -0.21
HLA-DOA-204ENST00000485901 RBM25P49756 843 aaKnown RBP13.74□□□□□ -0.21
HLA-DOA-204ENST00000485901 SSRP1Q08945 709 aaKnown RBP13.74□□□□□ -0.21
HLA-DOA-204ENST00000485901 RBL2Q08999 1139 aa13.74□□□□□ -0.21
HLA-DOA-204ENST00000485901 STK3Q13188 491 aa13.74□□□□□ -0.21
HLA-DOA-204ENST00000485901 TTLL4Q14679 1199 aa13.74□□□□□ -0.21
HLA-DOA-204ENST00000485901 PGM5Q15124 567 aa13.74□□□□□ -0.21
HLA-DOA-204ENST00000485901 NBPF20Q3BBV1 942 aa13.74□□□□□ -0.21
HLA-DOA-204ENST00000485901 SEPT14Q6ZU15 432 aa13.74□□□□□ -0.21
HLA-DOA-204ENST00000485901 AFAP1L1Q8TED9 768 aa13.74□□□□□ -0.21
HLA-DOA-204ENST00000485901 CCDC12Q8WUD4 166 aaPredicted RBP13.74□□□□□ -0.21
HLA-DOA-204ENST00000485901 PHKBQ93100 1093 aa13.74□□□□□ -0.21
HLA-DOA-204ENST00000485901 SCLYQ96I15 445 aa13.74□□□□□ -0.21
HLA-DOA-204ENST00000485901 SLC26A6Q9BXS9 759 aa13.74□□□□□ -0.21
HLA-DOA-204ENST00000485901 TRMT13Q9NUP7 481 aaKnown RBP13.74□□□□□ -0.21
HLA-DOA-204ENST00000485901 TPCN1Q9ULQ1 816 aa13.74□□□□□ -0.21
HLA-DOA-204ENST00000485901 PIEZO1Q92508 2521 aa13.73□□□□□ -0.21
HLA-DOA-204ENST00000485901 KIAA1217Q5T5P2 1943 aa13.73□□□□□ -0.21
HLA-DOA-204ENST00000485901 SMCO2A6NFE2 343 aa13.73□□□□□ -0.21
HLA-DOA-204ENST00000485901 STXBP3O00186 592 aa13.73□□□□□ -0.21
HLA-DOA-204ENST00000485901 PFKFB2O60825 505 aa13.73□□□□□ -0.21
HLA-DOA-204ENST00000485901 STAM2O75886 525 aa13.73□□□□□ -0.21
HLA-DOA-204ENST00000485901 MYL3P08590 195 aa13.73□□□□□ -0.21
HLA-DOA-204ENST00000485901 PLA2G5P39877 138 aa13.73□□□□□ -0.21
HLA-DOA-204ENST00000485901 ADCY7P51828 1080 aa13.73□□□□□ -0.21
HLA-DOA-204ENST00000485901 RABGGTBP53611 331 aa13.73□□□□□ -0.21
HLA-DOA-204ENST00000485901 PKN1Q16512 942 aa13.73□□□□□ -0.21
HLA-DOA-204ENST00000485901 XRRA1Q6P2D8 792 aa13.73□□□□□ -0.21
HLA-DOA-204ENST00000485901 KCNV1Q6PIU1 500 aa13.73□□□□□ -0.21
HLA-DOA-204ENST00000485901 RIC8AQ9NPQ8 531 aa13.73□□□□□ -0.21
HLA-DOA-204ENST00000485901 SPDYE3A6NKU9 549 aa13.72□□□□□ -0.21
HLA-DOA-204ENST00000485901 CDKL5O76039 1030 aa13.72□□□□□ -0.21
HLA-DOA-204ENST00000485901 FOSP01100 380 aaPredicted RBP13.72□□□□□ -0.21
HLA-DOA-204ENST00000485901 CA3P07451 260 aa13.72□□□□□ -0.21
HLA-DOA-204ENST00000485901 CYP2C9P11712 490 aa13.72□□□□□ -0.21
HLA-DOA-204ENST00000485901 SCRN1Q12765 414 aa13.72□□□□□ -0.21
HLA-DOA-204ENST00000485901 TYW1BQ6NUM6 668 aa13.72□□□□□ -0.21
HLA-DOA-204ENST00000485901 CCDC62Q6P9F0 684 aa13.72□□□□□ -0.21
HLA-DOA-204ENST00000485901 HERC6Q8IVU3 1022 aa13.72□□□□□ -0.21
HLA-DOA-204ENST00000485901 EHMT1Q9H9B1 1298 aa13.72□□□□□ -0.21
HLA-DOA-204ENST00000485901 C6orf50Q9HD87 102 aa13.72□□□□□ -0.21
HLA-DOA-204ENST00000485901 PCDHA6Q9UN73 950 aa13.72□□□□□ -0.21
HLA-DOA-204ENST00000485901 PCDHA8Q9Y5H6 950 aa13.72□□□□□ -0.21
HLA-DOA-204ENST00000485901 FRMPD4Q14CM0 1322 aa13.71□□□□□ -0.21
HLA-DOA-204ENST00000485901 TGFB3P10600 412 aa13.71□□□□□ -0.21
HLA-DOA-204ENST00000485901 GNA11P29992 359 aa13.71□□□□□ -0.21
HLA-DOA-204ENST00000485901 TAP1Q03518 808 aa13.71□□□□□ -0.21
HLA-DOA-204ENST00000485901 UBE2SQ16763 222 aa13.71□□□□□ -0.21
HLA-DOA-204ENST00000485901 GNPTABQ3T906 1256 aa13.71□□□□□ -0.21
HLA-DOA-204ENST00000485901 TMEM63BQ5T3F8 832 aa13.71□□□□□ -0.21
HLA-DOA-204ENST00000485901 PCNX4Q63HM2 1172 aa13.71□□□□□ -0.21
HLA-DOA-204ENST00000485901 MCTP2Q6DN12 878 aa13.71□□□□□ -0.21
HLA-DOA-204ENST00000485901 DEFB128Q7Z7B8 93 aa13.71□□□□□ -0.21
HLA-DOA-204ENST00000485901 HLA-CQ95604 372 aa13.71□□□□□ -0.21
HLA-DOA-204ENST00000485901 EMID1Q96A84 441 aaPredicted RBP13.71□□□□□ -0.21
HLA-DOA-204ENST00000485901 FAM122AQ96E09 287 aa13.71□□□□□ -0.21
HLA-DOA-204ENST00000485901 ZMYND12Q9H0C1 365 aa13.71□□□□□ -0.21
HLA-DOA-204ENST00000485901 SH3GLB2Q9NR46 395 aa13.71□□□□□ -0.21
HLA-DOA-204ENST00000485901 DDX41Q9UJV9 622 aaKnown RBP13.71□□□□□ -0.21
HLA-DOA-204ENST00000485901 NOD1Q9Y239 953 aa13.71□□□□□ -0.21
HLA-DOA-204ENST00000485901 MRVI1Q9Y6F6 885 aa13.71□□□□□ -0.21
HLA-DOA-204ENST00000485901 ABHD14A-ACY1A0A1B0GW23 586 aa13.7□□□□□ -0.22
HLA-DOA-204ENST00000485901 ESYT2A0FGR8 921 aa13.7□□□□□ -0.22
HLA-DOA-204ENST00000485901 TLL1O43897 1013 aa13.7□□□□□ -0.22
HLA-DOA-204ENST00000485901 PPFIA3O75145 1194 aa13.7□□□□□ -0.22
HLA-DOA-204ENST00000485901 ARIH2O95376 493 aa13.7□□□□□ -0.22
HLA-DOA-204ENST00000485901 DEXIO95424 95 aa13.7□□□□□ -0.22
HLA-DOA-204ENST00000485901 GH1P01241 217 aa13.7□□□□□ -0.22
HLA-DOA-204ENST00000485901 CXCL10P02778 98 aa13.7□□□□□ -0.22
HLA-DOA-204ENST00000485901 MYOGP15173 224 aa13.7□□□□□ -0.22
HLA-DOA-204ENST00000485901 KCNJ6P48051 423 aa13.7□□□□□ -0.22
HLA-DOA-204ENST00000485901 AP3B2Q13367 1082 aa13.7□□□□□ -0.22
HLA-DOA-204ENST00000485901 ME3Q16798 604 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms