RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 SETQ01105 290 aaPredicted RBP13.46□□□□□ -0.25
HPS4-214ENST00000485842 LETM2Q2VYF4 491 aa13.46□□□□□ -0.25
HPS4-214ENST00000485842 HSDL1Q3SXM5 330 aa13.46□□□□□ -0.25
HPS4-214ENST00000485842 EARS2Q5JPH6 523 aaKnown RBP13.46□□□□□ -0.25
HPS4-214ENST00000485842 METTL7BQ6UX53 244 aa13.46□□□□□ -0.25
HPS4-214ENST00000485842 SLC39A5Q6ZMH5 540 aa13.46□□□□□ -0.25
HPS4-214ENST00000485842 NIPA1Q7RTP0 329 aa13.46□□□□□ -0.25
HPS4-214ENST00000485842 NEK8Q86SG6 692 aa13.46□□□□□ -0.25
HPS4-214ENST00000485842 GIMAP8Q8ND71 665 aaPredicted RBP13.46□□□□□ -0.25
HPS4-214ENST00000485842 FBXO18Q8NFZ0 1043 aa13.46□□□□□ -0.25
HPS4-214ENST00000485842 PPTC7Q8NI37 304 aa13.46□□□□□ -0.25
HPS4-214ENST00000485842 TNFRSF25Q93038 417 aa13.46□□□□□ -0.25
HPS4-214ENST00000485842 SNX21Q969T3 373 aa13.46□□□□□ -0.25
HPS4-214ENST00000485842 SENP7Q9BQF6 1050 aa13.46□□□□□ -0.25
HPS4-214ENST00000485842 AGO4Q9HCK5 861 aaKnown RBP13.46□□□□□ -0.25
HPS4-214ENST00000485842 ATP11BQ9Y2G3 1177 aa13.46□□□□□ -0.25
HPS4-214ENST00000485842 A0A0U1RQG5 324 aaPredicted RBP13.45□□□□□ -0.26
HPS4-214ENST00000485842 DDX39AO00148 427 aaKnown RBP13.45□□□□□ -0.26
HPS4-214ENST00000485842 EDIL3O43854 480 aa13.45□□□□□ -0.26
HPS4-214ENST00000485842 CABYRO75952 493 aa13.45□□□□□ -0.26
HPS4-214ENST00000485842 ZNF286BP0CG31 522 aa13.45□□□□□ -0.26
HPS4-214ENST00000485842 CIITAP33076 1130 aa13.45□□□□□ -0.26
HPS4-214ENST00000485842 USP11P51784 963 aa13.45□□□□□ -0.26
HPS4-214ENST00000485842 RTP1P59025 263 aa13.45□□□□□ -0.26
HPS4-214ENST00000485842 DGKDQ16760 1214 aa13.45□□□□□ -0.26
HPS4-214ENST00000485842 C7orf61Q8IZ16 206 aa13.45□□□□□ -0.26
HPS4-214ENST00000485842 SDF4Q9BRK5 362 aa13.45□□□□□ -0.26
HPS4-214ENST00000485842 ZNF577Q9BSK1 485 aa13.45□□□□□ -0.26
HPS4-214ENST00000485842 MTG1Q9BT17 334 aaPredicted RBP13.45□□□□□ -0.26
HPS4-214ENST00000485842 JPH1Q9HDC5 661 aaPredicted RBP13.45□□□□□ -0.26
HPS4-214ENST00000485842 TELO2Q9Y4R8 837 aa13.45□□□□□ -0.26
HPS4-214ENST00000485842 ELP1O95163 1332 aa13.44□□□□□ -0.26
HPS4-214ENST00000485842 H3BQV1 296 aa13.44□□□□□ -0.26
HPS4-214ENST00000485842 EVI5O60447 810 aa13.44□□□□□ -0.26
HPS4-214ENST00000485842 CCNT1O60563 726 aaKnown RBP13.44□□□□□ -0.26
HPS4-214ENST00000485842 KPNA6O60684 536 aa13.44□□□□□ -0.26
HPS4-214ENST00000485842 ITGB3BPQ13352 177 aaPredicted RBP13.44□□□□□ -0.26
HPS4-214ENST00000485842 TRIM60Q495X7 471 aa13.44□□□□□ -0.26
HPS4-214ENST00000485842 UTP14CQ5TAP6 766 aaKnown RBP13.44□□□□□ -0.26
HPS4-214ENST00000485842 PPP1R13LQ8WUF5 828 aa13.44□□□□□ -0.26
HPS4-214ENST00000485842 LENG9Q96B70 501 aa13.44□□□□□ -0.26
HPS4-214ENST00000485842 SLC9A2Q9UBY0 812 aa13.44□□□□□ -0.26
HPS4-214ENST00000485842 SCN10AQ9Y5Y9 1956 aa13.43□□□□□ -0.26
HPS4-214ENST00000485842 NFASCO94856 1347 aa13.43□□□□□ -0.26
HPS4-214ENST00000485842 KIF28PB7ZC32 967 aa13.43□□□□□ -0.26
HPS4-214ENST00000485842 IPO5O00410 1097 aaKnown RBP13.43□□□□□ -0.26
HPS4-214ENST00000485842 MSH4O15457 936 aa13.43□□□□□ -0.26
HPS4-214ENST00000485842 PQBP1O60828 265 aaKnown RBP13.43□□□□□ -0.26
HPS4-214ENST00000485842 HSP90AA1P07900 732 aaKnown RBP13.43□□□□□ -0.26
HPS4-214ENST00000485842 ATP2B1P20020 1258 aa13.43□□□□□ -0.26
HPS4-214ENST00000485842 ITGA7Q13683 1181 aa13.43□□□□□ -0.26
HPS4-214ENST00000485842 SNX17Q15036 470 aa13.43□□□□□ -0.26
HPS4-214ENST00000485842 LARP1BQ659C4 914 aaKnown RBP13.43□□□□□ -0.26
HPS4-214ENST00000485842 MCTP1Q6DN14 999 aa13.43□□□□□ -0.26
HPS4-214ENST00000485842 MOXD1Q6UVY6 613 aa13.43□□□□□ -0.26
HPS4-214ENST00000485842 GPR20Q99678 358 aa13.43□□□□□ -0.26
HPS4-214ENST00000485842 DDX25Q9UHL0 483 aaKnown RBP13.43□□□□□ -0.26
HPS4-214ENST00000485842 TCEAL9Q9UHQ7 104 aa13.43□□□□□ -0.26
HPS4-214ENST00000485842 ARVCFO00192 962 aa13.42□□□□□ -0.26
HPS4-214ENST00000485842 SLC37A4O43826 429 aa13.42□□□□□ -0.26
HPS4-214ENST00000485842 PPFIA4O75335 1185 aa13.42□□□□□ -0.26
HPS4-214ENST00000485842 LGALS2P05162 132 aa13.42□□□□□ -0.26
HPS4-214ENST00000485842 HOXD8P13378 290 aaPredicted RBP13.42□□□□□ -0.26
HPS4-214ENST00000485842 GCFC2P16383 781 aaKnown RBP13.42□□□□□ -0.26
HPS4-214ENST00000485842 TCF7P36402 384 aaPredicted RBP13.42□□□□□ -0.26
HPS4-214ENST00000485842 PSEN2P49810 448 aa13.42□□□□□ -0.26
HPS4-214ENST00000485842 TLE2Q04725 743 aa13.42□□□□□ -0.26
HPS4-214ENST00000485842 Q4G0T1 1027 aa13.42□□□□□ -0.26
HPS4-214ENST00000485842 FAM47CQ5HY64 1035 aa13.42□□□□□ -0.26
HPS4-214ENST00000485842 TRIM50Q86XT4 487 aa13.42□□□□□ -0.26
HPS4-214ENST00000485842 GJA10Q969M2 543 aa13.42□□□□□ -0.26
HPS4-214ENST00000485842 FOXP1Q9H334 677 aaPredicted RBP13.42□□□□□ -0.26
HPS4-214ENST00000485842 GRIN2DO15399 1336 aa13.41□□□□□ -0.26
HPS4-214ENST00000485842 PDE4DIPQ5VU43 2346 aa13.41□□□□□ -0.26
HPS4-214ENST00000485842 CYP3A7-CYP3A51PA0A087WV96 503 aa13.41□□□□□ -0.26
HPS4-214ENST00000485842 GSTTP1A0A1W2PQM5 241 aa13.41□□□□□ -0.26
HPS4-214ENST00000485842 VPS37CA5D8V6 355 aaPredicted RBP13.41□□□□□ -0.26
HPS4-214ENST00000485842 WNT7AO00755 349 aa13.41□□□□□ -0.26
HPS4-214ENST00000485842 GAS7O60861 476 aa13.41□□□□□ -0.26
HPS4-214ENST00000485842 F2P00734 622 aa13.41□□□□□ -0.26
HPS4-214ENST00000485842 CYP3A7P24462 503 aa13.41□□□□□ -0.26
HPS4-214ENST00000485842 ACTR2P61160 394 aa13.41□□□□□ -0.26
HPS4-214ENST00000485842 MFSD10Q14728 455 aa13.41□□□□□ -0.26
HPS4-214ENST00000485842 NBPF20Q3BBV1 942 aa13.41□□□□□ -0.26
HPS4-214ENST00000485842 LRCH2Q5VUJ6 765 aa13.41□□□□□ -0.26
HPS4-214ENST00000485842 NOSTRINQ8IVI9 506 aa13.41□□□□□ -0.26
HPS4-214ENST00000485842 SPRYD3Q8NCJ5 442 aa13.41□□□□□ -0.26
HPS4-214ENST00000485842 SEPT1Q8WYJ6 367 aa13.41□□□□□ -0.26
HPS4-214ENST00000485842 KAT2BQ92831 832 aa13.41□□□□□ -0.26
HPS4-214ENST00000485842 INTS4Q96HW7 963 aaKnown RBP13.41□□□□□ -0.26
HPS4-214ENST00000485842 MBOAT7Q96N66 472 aa13.41□□□□□ -0.26
HPS4-214ENST00000485842 NAP1L4Q99733 375 aaKnown RBP13.41□□□□□ -0.26
HPS4-214ENST00000485842 KATNAL1Q9BW62 490 aa13.41□□□□□ -0.26
HPS4-214ENST00000485842 TEKT3Q9BXF9 490 aa13.41□□□□□ -0.26
HPS4-214ENST00000485842 PRDM5Q9NQX1 630 aaPredicted RBP13.41□□□□□ -0.26
HPS4-214ENST00000485842 TBC1D22BQ9NU19 505 aa13.41□□□□□ -0.26
HPS4-214ENST00000485842 ZMYND8Q9ULU4 1186 aaPredicted RBP13.41□□□□□ -0.26
HPS4-214ENST00000485842 NR2E3Q9Y5X4 410 aa13.41□□□□□ -0.26
HPS4-214ENST00000485842 MROH7Q68CQ1 1323 aa13.4□□□□□ -0.26
HPS4-214ENST00000485842 DCDC2CA8MYV0 355 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms