RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 EFEMP2O95967 443 aa4.75□□□□□ -1.65
PRPF38B-205ENST00000485810 FLT3P36888 993 aa4.75□□□□□ -1.65
PRPF38B-205ENST00000485810 RARSP54136 660 aaKnown RBP4.75□□□□□ -1.65
PRPF38B-205ENST00000485810 CCDC70Q6NSX1 233 aa4.75□□□□□ -1.65
PRPF38B-205ENST00000485810 HDGFL2Q7Z4V5 671 aaPredicted RBP4.75□□□□□ -1.65
PRPF38B-205ENST00000485810 CCDC84Q86UT8 332 aaPredicted RBP4.75□□□□□ -1.65
PRPF38B-205ENST00000485810 MORC1Q86VD1 984 aa4.75□□□□□ -1.65
PRPF38B-205ENST00000485810 SHISA4Q96DD7 197 aa4.75□□□□□ -1.65
PRPF38B-205ENST00000485810 BORCS6Q96GS4 357 aa4.75□□□□□ -1.65
PRPF38B-205ENST00000485810 COX4I2Q96KJ9 171 aa4.75□□□□□ -1.65
PRPF38B-205ENST00000485810 TTC14Q96N46 770 aa4.75□□□□□ -1.65
PRPF38B-205ENST00000485810 LRRC27Q9C0I9 530 aa4.75□□□□□ -1.65
PRPF38B-205ENST00000485810 RETREG1Q9H6L5 497 aa4.75□□□□□ -1.65
PRPF38B-205ENST00000485810 AS3MTQ9HBK9 375 aa4.75□□□□□ -1.65
PRPF38B-205ENST00000485810 HOMER2Q9NSB8 354 aa4.75□□□□□ -1.65
PRPF38B-205ENST00000485810 ABCC11Q96J66 1382 aa4.75□□□□□ -1.65
PRPF38B-205ENST00000485810 TULP4Q9NRJ4 1543 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 GLI2P10070 1586 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 QRICH2Q9H0J4 1663 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 FOXD2O60548 495 aaPredicted RBP4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 BCAR3O75815 825 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 IGHDP01880 384 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 FAM163BP0C2L3 166 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 BMP7P18075 431 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 ZNF76P36508 570 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 ETV3P41162 512 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 TNNI2P48788 182 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 HLTFQ14527 1009 aaKnown RBP eCLIP4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 PLEKHG4Q58EX7 1191 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 TMEM201Q5SNT2 666 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 ERMP1Q7Z2K6 904 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 REC114Q7Z4M0 266 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 LCA5Q86VQ0 697 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 CKAP2LQ8IYA6 745 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 CHCHD4Q8N4Q1 142 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 TCP11L2Q8N4U5 519 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 ZNF513Q8N8E2 541 aaPredicted RBP4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 PDZD8Q8NEN9 1154 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 CYB5D2Q8WUJ1 264 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 CCDC47Q96A33 483 aaKnown RBP4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 CFAP53Q96M91 514 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 KIF2CQ99661 725 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 SGPP1Q9BX95 441 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 ZNF552Q9H707 407 aaPredicted RBP4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 BRMS1Q9HCU9 246 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 POLG2Q9UHN1 485 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 GGT7Q9UJ14 662 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 FBXO2Q9UK22 296 aaPredicted RBP4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 ODF2LQ9ULJ1 636 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 RABGAP1Q9Y3P9 1069 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 MRVI1Q9Y6F6 885 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 EVC2Q86UK5 1308 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 PNPLA6Q8IY17 1366 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 CD109Q6YHK3 1445 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 COL3A1P02461 1466 aaPredicted RBP4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 CAMSAP1Q5T5Y3 1602 aa4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 ARHGEF28Q8N1W1 1705 aaKnown RBP4.74□□□□□ -1.65
PRPF38B-205ENST00000485810 PABPN1LA6NDY0 278 aaKnown RBP4.73□□□□□ -1.65
PRPF38B-205ENST00000485810 NOTOA8MTQ0 251 aa4.73□□□□□ -1.65
PRPF38B-205ENST00000485810 PEX10O60683 326 aa4.73□□□□□ -1.65
PRPF38B-205ENST00000485810 TRIM13O60858 407 aa4.73□□□□□ -1.65
PRPF38B-205ENST00000485810 MYL3P08590 195 aa4.73□□□□□ -1.65
PRPF38B-205ENST00000485810 EIF4A3P38919 411 aaKnown RBP4.73□□□□□ -1.65
PRPF38B-205ENST00000485810 CRKP46108 304 aa4.73□□□□□ -1.65
PRPF38B-205ENST00000485810 YARSP54577 528 aaKnown RBP4.73□□□□□ -1.65
PRPF38B-205ENST00000485810 CLTCQ00610 1675 aaKnown RBP4.73□□□□□ -1.65
PRPF38B-205ENST00000485810 ZKSCAN8Q15776 578 aaPredicted RBP4.73□□□□□ -1.65
PRPF38B-205ENST00000485810 CDC42BPGQ6DT37 1551 aa4.73□□□□□ -1.65
PRPF38B-205ENST00000485810 PPIP5K1Q6PFW1 1433 aa4.73□□□□□ -1.65
PRPF38B-205ENST00000485810 FAM196AQ6ZSG2 479 aa4.73□□□□□ -1.65
PRPF38B-205ENST00000485810 KRT77Q7Z794 578 aa4.73□□□□□ -1.65
PRPF38B-205ENST00000485810 ZNF605Q86T29 641 aa4.73□□□□□ -1.65
PRPF38B-205ENST00000485810 TSPYL5Q86VY4 417 aaPredicted RBP4.73□□□□□ -1.65
PRPF38B-205ENST00000485810 IRF2BP1Q8IU81 584 aa4.73□□□□□ -1.65
PRPF38B-205ENST00000485810 LMNTD2Q8IXW0 634 aa4.73□□□□□ -1.65
PRPF38B-205ENST00000485810 PHACTR4Q8IZ21 702 aa4.73□□□□□ -1.65
PRPF38B-205ENST00000485810 MARCH10Q8NA82 808 aaPredicted RBP4.73□□□□□ -1.65
PRPF38B-205ENST00000485810 DTWD2Q8NBA8 298 aa4.73□□□□□ -1.65
PRPF38B-205ENST00000485810 NGDNQ8NEJ9 315 aaKnown RBP4.73□□□□□ -1.65
PRPF38B-205ENST00000485810 ZNF296Q8WUU4 475 aaPredicted RBP4.73□□□□□ -1.65
PRPF38B-205ENST00000485810 GPR62Q9BZJ7 368 aa4.73□□□□□ -1.65
PRPF38B-205ENST00000485810 ARNT2Q9HBZ2 717 aa4.73□□□□□ -1.65
PRPF38B-205ENST00000485810 ASAP1Q9ULH1 1129 aa4.73□□□□□ -1.65
PRPF38B-205ENST00000485810 DLC1Q96QB1 1528 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 PRR36Q9H6K5 1346 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 SHISA3A0PJX4 238 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 RNASEH2AO75792 299 aaKnown RBP4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 PDE6BP35913 854 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 TDO2P48775 406 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 MTHFSP49914 203 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 GALK1P51570 392 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 CHMP4BP1P59074 171 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 FANCCQ00597 558 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 EGR3Q06889 387 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 KIAA2012Q0VF49 1180 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 PWP1Q13610 501 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 MPP2Q14168 576 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 BECN1Q14457 450 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 SSPNQ14714 243 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms