RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 SMRP1Q8NCR6 262 aa14.28□□□□□ -0.12
SSR4-210ENST00000485612 EVI5LQ96CN4 794 aa14.28□□□□□ -0.12
SSR4-210ENST00000485612 RPGRIP1Q96KN7 1286 aa14.28□□□□□ -0.12
SSR4-210ENST00000485612 RIPOR3Q96MK2 946 aa14.28□□□□□ -0.12
SSR4-210ENST00000485612 TMEM47Q9BQJ4 181 aa14.28□□□□□ -0.12
SSR4-210ENST00000485612 GPCPD1Q9NPB8 672 aa14.28□□□□□ -0.12
SSR4-210ENST00000485612 SPTBN4Q9H254 2564 aa14.28□□□□□ -0.12
SSR4-210ENST00000485612 HAS3O00219 553 aa14.27□□□□□ -0.13
SSR4-210ENST00000485612 PDGFBP01127 241 aaPredicted RBP14.27□□□□□ -0.13
SSR4-210ENST00000485612 COASYQ13057 564 aa14.27□□□□□ -0.13
SSR4-210ENST00000485612 HIC1Q14526 733 aa14.27□□□□□ -0.13
SSR4-210ENST00000485612 BTNL9Q6UXG8 535 aa14.27□□□□□ -0.13
SSR4-210ENST00000485612 ADSSL1Q8N142 457 aa14.27□□□□□ -0.13
SSR4-210ENST00000485612 NKD2Q969F2 451 aaPredicted RBP14.27□□□□□ -0.13
SSR4-210ENST00000485612 PPP2R3CQ969Q6 453 aa14.27□□□□□ -0.13
SSR4-210ENST00000485612 PHF7Q9BWX1 381 aaPredicted RBP14.27□□□□□ -0.13
SSR4-210ENST00000485612 HELLSQ9NRZ9 838 aa14.27□□□□□ -0.13
SSR4-210ENST00000485612 KRT37O76014 449 aa14.26□□□□□ -0.13
SSR4-210ENST00000485612 F2P00734 622 aa14.26□□□□□ -0.13
SSR4-210ENST00000485612 MMP1P03956 469 aa14.26□□□□□ -0.13
SSR4-210ENST00000485612 LINC00271P0C7V0 271 aa14.26□□□□□ -0.13
SSR4-210ENST00000485612 ZNF286BP0CG31 522 aa14.26□□□□□ -0.13
SSR4-210ENST00000485612 HSPD1P10809 573 aaKnown RBP14.26□□□□□ -0.13
SSR4-210ENST00000485612 TOP1P11387 765 aaKnown RBP14.26□□□□□ -0.13
SSR4-210ENST00000485612 ICAM3P32942 547 aa14.26□□□□□ -0.13
SSR4-210ENST00000485612 SERINC5Q86VE9 423 aa14.26□□□□□ -0.13
SSR4-210ENST00000485612 TBC1D10CQ8IV04 446 aa14.26□□□□□ -0.13
SSR4-210ENST00000485612 USP15Q9Y4E8 981 aaPredicted RBP14.26□□□□□ -0.13
SSR4-210ENST00000485612 MYO7AQ13402 2215 aa14.26□□□□□ -0.13
SSR4-210ENST00000485612 NLRC5Q86WI3 1866 aa14.25□□□□□ -0.13
SSR4-210ENST00000485612 RGS20O76081 388 aa14.25□□□□□ -0.13
SSR4-210ENST00000485612 PDHBP11177 359 aa14.25□□□□□ -0.13
SSR4-210ENST00000485612 PTPN21Q16825 1174 aa14.25□□□□□ -0.13
SSR4-210ENST00000485612 MCMDC2Q4G0Z9 681 aa14.25□□□□□ -0.13
SSR4-210ENST00000485612 FRMD5Q7Z6J6 570 aa14.25□□□□□ -0.13
SSR4-210ENST00000485612 EFHBQ8N7U6 833 aa14.25□□□□□ -0.13
SSR4-210ENST00000485612 OSBPL7Q9BZF2 842 aa14.25□□□□□ -0.13
SSR4-210ENST00000485612 LNPKQ9C0E8 428 aa14.25□□□□□ -0.13
SSR4-210ENST00000485612 CPVLQ9H3G5 476 aa14.25□□□□□ -0.13
SSR4-210ENST00000485612 PNMA2Q9UL42 364 aa14.25□□□□□ -0.13
SSR4-210ENST00000485612 RALGAPA2Q2PPJ7 1873 aa14.25□□□□□ -0.13
SSR4-210ENST00000485612 ZMYM6O95789 1325 aa14.24□□□□□ -0.13
SSR4-210ENST00000485612 NEDD4P46934 1319 aa14.24□□□□□ -0.13
SSR4-210ENST00000485612 CCDC171Q6TFL3 1326 aa14.24□□□□□ -0.13
SSR4-210ENST00000485612 MED19A0JLT2 244 aaPredicted RBP14.24□□□□□ -0.13
SSR4-210ENST00000485612 LAMC2Q13753 1193 aa14.24□□□□□ -0.13
SSR4-210ENST00000485612 CAMK1Q14012 370 aa14.24□□□□□ -0.13
SSR4-210ENST00000485612 ADGRD2Q7Z7M1 963 aa14.24□□□□□ -0.13
SSR4-210ENST00000485612 APBB2Q92870 758 aa14.24□□□□□ -0.13
SSR4-210ENST00000485612 CLP1Q92989 425 aaKnown RBP14.24□□□□□ -0.13
SSR4-210ENST00000485612 EMID1Q96A84 441 aaPredicted RBP14.24□□□□□ -0.13
SSR4-210ENST00000485612 ZKSCAN3Q9BRR0 538 aa14.24□□□□□ -0.13
SSR4-210ENST00000485612 PLVAPQ9BX97 442 aa14.24□□□□□ -0.13
SSR4-210ENST00000485612 TCP11L1Q9NUJ3 509 aa14.24□□□□□ -0.13
SSR4-210ENST00000485612 ZBTB47Q9UFB7 747 aaPredicted RBP14.24□□□□□ -0.13
SSR4-210ENST00000485612 DDX41Q9UJV9 622 aaKnown RBP14.24□□□□□ -0.13
SSR4-210ENST00000485612 BARX2Q9UMQ3 279 aaPredicted RBP14.24□□□□□ -0.13
SSR4-210ENST00000485612 PLAGL2Q9UPG8 496 aa14.24□□□□□ -0.13
SSR4-210ENST00000485612 CACNA1HO95180 2353 aa14.23□□□□□ -0.13
SSR4-210ENST00000485612 TRIM6-TRIM34B2RNG4 842 aa14.23□□□□□ -0.13
SSR4-210ENST00000485612 ZNF543Q08ER8 600 aa14.23□□□□□ -0.13
SSR4-210ENST00000485612 HDAC1Q13547 482 aaPredicted RBP14.23□□□□□ -0.13
SSR4-210ENST00000485612 STXBP2Q15833 593 aa14.23□□□□□ -0.13
SSR4-210ENST00000485612 MCTP2Q6DN12 878 aa14.23□□□□□ -0.13
SSR4-210ENST00000485612 ZBTB33Q86T24 672 aa14.23□□□□□ -0.13
SSR4-210ENST00000485612 PPTC7Q8NI37 304 aa14.23□□□□□ -0.13
SSR4-210ENST00000485612 ATP6V0A1Q93050 837 aa14.23□□□□□ -0.13
SSR4-210ENST00000485612 ATG2AQ2TAZ0 1938 aa14.23□□□□□ -0.13
SSR4-210ENST00000485612 KAT6AQ92794 2004 aa14.22□□□□□ -0.13
SSR4-210ENST00000485612 ADGRA3Q8IWK6 1321 aa14.22□□□□□ -0.13
SSR4-210ENST00000485612 C17orf102A2RUQ5 167 aa14.22□□□□□ -0.13
SSR4-210ENST00000485612 PPFIA4O75335 1185 aa14.22□□□□□ -0.13
SSR4-210ENST00000485612 CTSHP09668 335 aa14.22□□□□□ -0.13
SSR4-210ENST00000485612 GOLGA8HP0CJ92 632 aa14.22□□□□□ -0.13
SSR4-210ENST00000485612 SNHG28P0DPA3 235 aa14.22□□□□□ -0.13
SSR4-210ENST00000485612 ATF7P17544 494 aaPredicted RBP14.22□□□□□ -0.13
SSR4-210ENST00000485612 NRIP1P48552 1158 aa14.22□□□□□ -0.13
SSR4-210ENST00000485612 BTG3Q14201 252 aaPredicted RBP14.22□□□□□ -0.13
SSR4-210ENST00000485612 B4GALNT3Q6L9W6 998 aa14.22□□□□□ -0.13
SSR4-210ENST00000485612 DGLUCYQ7Z3D6 616 aa14.22□□□□□ -0.13
SSR4-210ENST00000485612 RBM23Q86U06 439 aaKnown RBP14.22□□□□□ -0.13
SSR4-210ENST00000485612 TMEM105Q8N8V8 129 aa14.22□□□□□ -0.13
SSR4-210ENST00000485612 RGS22Q8NE09 1264 aa14.22□□□□□ -0.13
SSR4-210ENST00000485612 NSUN6Q8TEA1 469 aaKnown RBP14.22□□□□□ -0.13
SSR4-210ENST00000485612 RILPL2Q969X0 211 aa14.22□□□□□ -0.13
SSR4-210ENST00000485612 TAAR1Q96RJ0 339 aa14.22□□□□□ -0.13
SSR4-210ENST00000485612 CAND2O75155 1236 aa14.21□□□□□ -0.13
SSR4-210ENST00000485612 GLP2RO95838 553 aa14.21□□□□□ -0.13
SSR4-210ENST00000485612 DNAJB1P25685 340 aa14.21□□□□□ -0.13
SSR4-210ENST00000485612 USH1GQ495M9 461 aa14.21□□□□□ -0.13
SSR4-210ENST00000485612 MFSD6Q6ZSS7 791 aa14.21□□□□□ -0.13
SSR4-210ENST00000485612 SPPL3Q8TCT6 385 aa14.21□□□□□ -0.13
SSR4-210ENST00000485612 P2RX5Q93086 422 aa14.21□□□□□ -0.13
SSR4-210ENST00000485612 IWS1Q96ST2 819 aa14.21□□□□□ -0.13
SSR4-210ENST00000485612 RC3H2Q9HBD1 1191 aaKnown RBP14.21□□□□□ -0.13
SSR4-210ENST00000485612 MRVI1Q9Y6F6 885 aa14.21□□□□□ -0.13
SSR4-210ENST00000485612 WDR19Q8NEZ3 1342 aa14.2□□□□□ -0.14
SSR4-210ENST00000485612 TREHO43280 583 aa14.2□□□□□ -0.14
SSR4-210ENST00000485612 ITGB1P05556 798 aa14.2□□□□□ -0.14
SSR4-210ENST00000485612 HOXD8P13378 290 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms