RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 MYCLP12524 364 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-215ENST00000485550 PTPN11Q06124 597 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-215ENST00000485550 SLC35G1Q2M3R5 365 aa12.28□□□□□ -0.44
HMGN1-215ENST00000485550 GDF6Q6KF10 455 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-215ENST00000485550 CCDC62Q6P9F0 684 aa12.28□□□□□ -0.44
HMGN1-215ENST00000485550 CNKSR3Q6P9H4 555 aa12.28□□□□□ -0.44
HMGN1-215ENST00000485550 CCDC155Q8N6L0 562 aa12.28□□□□□ -0.44
HMGN1-215ENST00000485550 FBXO22Q8NEZ5 403 aa12.28□□□□□ -0.44
HMGN1-215ENST00000485550 AFAP1L1Q8TED9 768 aa12.28□□□□□ -0.44
HMGN1-215ENST00000485550 PIBF1Q8WXW3 757 aa12.28□□□□□ -0.44
HMGN1-215ENST00000485550 DHX38Q92620 1227 aaKnown RBP12.28□□□□□ -0.44
HMGN1-215ENST00000485550 CTAGE1Q96RT6 745 aa12.28□□□□□ -0.44
HMGN1-215ENST00000485550 PIGSQ96S52 555 aa12.28□□□□□ -0.44
HMGN1-215ENST00000485550 PHOX2BQ99453 314 aa12.28□□□□□ -0.44
HMGN1-215ENST00000485550 C17orf80Q9BSJ5 609 aa12.28□□□□□ -0.44
HMGN1-215ENST00000485550 ZDBF2Q9HCK1 2354 aa12.28□□□□□ -0.44
HMGN1-215ENST00000485550 KAT6AQ92794 2004 aa12.27□□□□□ -0.44
HMGN1-215ENST00000485550 POTEB3A0JP26 581 aa12.27□□□□□ -0.45
HMGN1-215ENST00000485550 ERICH2A1L162 156 aa12.27□□□□□ -0.45
HMGN1-215ENST00000485550 PALM3A6NDB9 673 aaPredicted RBP12.27□□□□□ -0.45
HMGN1-215ENST00000485550 E7EWF7 191 aa12.27□□□□□ -0.45
HMGN1-215ENST00000485550 ZBTB5O15062 677 aa12.27□□□□□ -0.45
HMGN1-215ENST00000485550 SGSM2O43147 1006 aa12.27□□□□□ -0.45
HMGN1-215ENST00000485550 KPNA6O60684 536 aa12.27□□□□□ -0.45
HMGN1-215ENST00000485550 NBNO60934 754 aa12.27□□□□□ -0.45
HMGN1-215ENST00000485550 SELPP16109 830 aa12.27□□□□□ -0.45
HMGN1-215ENST00000485550 HOXA13P31271 388 aaPredicted RBP12.27□□□□□ -0.45
HMGN1-215ENST00000485550 WTAPQ15007 396 aa12.27□□□□□ -0.45
HMGN1-215ENST00000485550 POTEBQ6S5H4 581 aa12.27□□□□□ -0.45
HMGN1-215ENST00000485550 STOX1Q6ZVD7 989 aa12.27□□□□□ -0.45
HMGN1-215ENST00000485550 HFE2Q6ZVN8 426 aa12.27□□□□□ -0.45
HMGN1-215ENST00000485550 LRRC8DQ7L1W4 858 aa12.27□□□□□ -0.45
HMGN1-215ENST00000485550 RALYLQ86SE5 291 aaKnown RBP12.27□□□□□ -0.45
HMGN1-215ENST00000485550 CAGE1Q8TC20 777 aa12.27□□□□□ -0.45
HMGN1-215ENST00000485550 NEK9Q8TD19 979 aa12.27□□□□□ -0.45
HMGN1-215ENST00000485550 IWS1Q96ST2 819 aa12.27□□□□□ -0.45
HMGN1-215ENST00000485550 PXMP2Q9NR77 195 aa12.27□□□□□ -0.45
HMGN1-215ENST00000485550 PCDHA1Q9Y5I3 950 aa12.27□□□□□ -0.45
HMGN1-215ENST00000485550 MRVI1Q9Y6F6 885 aa12.27□□□□□ -0.45
HMGN1-215ENST00000485550 EIF3JO75822 258 aaKnown RBP12.26□□□□□ -0.45
HMGN1-215ENST00000485550 MMP3P08254 477 aa12.26□□□□□ -0.45
HMGN1-215ENST00000485550 CASTP20810 708 aaKnown RBP12.26□□□□□ -0.45
HMGN1-215ENST00000485550 ARHGAP1Q07960 439 aa12.26□□□□□ -0.45
HMGN1-215ENST00000485550 GRM4Q14833 912 aa12.26□□□□□ -0.45
HMGN1-215ENST00000485550 FCHSD1Q86WN1 690 aa12.26□□□□□ -0.45
HMGN1-215ENST00000485550 NCOA7Q8NI08 942 aa12.26□□□□□ -0.45
HMGN1-215ENST00000485550 MTMR8Q96EF0 704 aa12.26□□□□□ -0.45
HMGN1-215ENST00000485550 ALG1Q9BT22 464 aa12.26□□□□□ -0.45
HMGN1-215ENST00000485550 MAF1Q9H063 256 aa12.26□□□□□ -0.45
HMGN1-215ENST00000485550 KCNH6Q9H252 994 aa12.26□□□□□ -0.45
HMGN1-215ENST00000485550 DDX41Q9UJV9 622 aaKnown RBP12.26□□□□□ -0.45
HMGN1-215ENST00000485550 KMT2EQ8IZD2 1858 aa12.25□□□□□ -0.45
HMGN1-215ENST00000485550 ABHD14A-ACY1A0A1B0GW23 586 aa12.25□□□□□ -0.45
HMGN1-215ENST00000485550 CYTH3O43739 400 aa12.25□□□□□ -0.45
HMGN1-215ENST00000485550 CXCL10P02778 98 aa12.25□□□□□ -0.45
HMGN1-215ENST00000485550 CHRM1P11229 460 aaPredicted RBP12.25□□□□□ -0.45
HMGN1-215ENST00000485550 CKBP12277 381 aa12.25□□□□□ -0.45
HMGN1-215ENST00000485550 HSD17B4P51659 736 aa12.25□□□□□ -0.45
HMGN1-215ENST00000485550 ANTXR2P58335 489 aa12.25□□□□□ -0.45
HMGN1-215ENST00000485550 ZP2Q05996 745 aa12.25□□□□□ -0.45
HMGN1-215ENST00000485550 SART3Q15020 963 aaKnown RBP12.25□□□□□ -0.45
HMGN1-215ENST00000485550 PUS10Q3MIT2 529 aaKnown RBP12.25□□□□□ -0.45
HMGN1-215ENST00000485550 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.25□□□□□ -0.452e-8■■■□□ 17.8
HMGN1-215ENST00000485550 DHX37Q8IY37 1157 aaKnown RBP12.25□□□□□ -0.45
HMGN1-215ENST00000485550 KAT2BQ92831 832 aa12.25□□□□□ -0.45
HMGN1-215ENST00000485550 PDCD2LQ9BRP1 358 aa12.25□□□□□ -0.45
HMGN1-215ENST00000485550 MYL10Q9BUA6 226 aa12.25□□□□□ -0.45
HMGN1-215ENST00000485550 RIOX1Q9H6W3 641 aa12.25□□□□□ -0.45
HMGN1-215ENST00000485550 RBM8AQ9Y5S9 174 aaKnown RBP12.25□□□□□ -0.45
HMGN1-215ENST00000485550 GCOM1H8Y6P7 765 aaPredicted RBP12.24□□□□□ -0.45
HMGN1-215ENST00000485550 RGS20O76081 388 aa12.24□□□□□ -0.45
HMGN1-215ENST00000485550 POLR2MP0CAP2 368 aa12.24□□□□□ -0.45
HMGN1-215ENST00000485550 TROAPQ12815 778 aa12.24□□□□□ -0.45
HMGN1-215ENST00000485550 IKBKEQ14164 716 aa12.24□□□□□ -0.45
HMGN1-215ENST00000485550 DGKDQ16760 1214 aa12.24□□□□□ -0.45
HMGN1-215ENST00000485550 TCEAL5Q5H9L2 206 aa12.24□□□□□ -0.45
HMGN1-215ENST00000485550 CATIPQ7Z7H3 387 aa12.24□□□□□ -0.45
HMGN1-215ENST00000485550 MYOCDQ8IZQ8 938 aa12.24□□□□□ -0.45
HMGN1-215ENST00000485550 IL31RAQ8NI17 732 aa12.24□□□□□ -0.45
HMGN1-215ENST00000485550 GPKOWQ92917 476 aaPredicted RBP eCLIP12.24□□□□□ -0.452e-6■■■■□ 20.4
HMGN1-215ENST00000485550 MAP4K1Q92918 833 aa12.24□□□□□ -0.45
HMGN1-215ENST00000485550 MRPL38Q96DV4 380 aaKnown RBP12.24□□□□□ -0.45
HMGN1-215ENST00000485550 DOCK5Q9H7D0 1870 aa12.24□□□□□ -0.45
HMGN1-215ENST00000485550 INSL6Q9Y581 213 aa12.24□□□□□ -0.45
HMGN1-215ENST00000485550 SPTBN4Q9H254 2564 aa12.23□□□□□ -0.45
HMGN1-215ENST00000485550 PNMA6FA0A0J9YX94 578 aa12.23□□□□□ -0.45
HMGN1-215ENST00000485550 PARNO95453 639 aaKnown RBP12.23□□□□□ -0.45
HMGN1-215ENST00000485550 ZNF286BP0CG31 522 aa12.23□□□□□ -0.45
HMGN1-215ENST00000485550 IRS1P35568 1242 aa12.23□□□□□ -0.45
HMGN1-215ENST00000485550 PSEN2P49810 448 aa12.23□□□□□ -0.45
HMGN1-215ENST00000485550 LAMC2Q13753 1193 aa12.23□□□□□ -0.45
HMGN1-215ENST00000485550 PGM5Q15124 567 aa12.23□□□□□ -0.45
HMGN1-215ENST00000485550 PTPROQ16827 1216 aa12.23□□□□□ -0.45
HMGN1-215ENST00000485550 EPC2Q52LR7 807 aa12.23□□□□□ -0.45
HMGN1-215ENST00000485550 TIGD5Q53EQ6 642 aa12.23□□□□□ -0.45
HMGN1-215ENST00000485550 ZNF618Q5T7W0 954 aa12.23□□□□□ -0.45
HMGN1-215ENST00000485550 VSIG10LQ86VR7 867 aa12.23□□□□□ -0.45
HMGN1-215ENST00000485550 SKAP1Q86WV1 359 aa12.23□□□□□ -0.45
HMGN1-215ENST00000485550 MB21D2Q8IYB1 491 aaPredicted RBP12.23□□□□□ -0.45
HMGN1-215ENST00000485550 BANK1Q8NDB2 785 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms