RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 NOD1Q9Y239 953 aa21.82■■□□□ 1.08
SNX17-206ENST00000484886 CD4P01730 458 aa21.81■■□□□ 1.08
SNX17-206ENST00000484886 PSEN2P49810 448 aa21.81■■□□□ 1.08
SNX17-206ENST00000484886 MFSD10Q14728 455 aa21.81■■□□□ 1.08
SNX17-206ENST00000484886 C7orf31Q8N865 590 aa21.81■■□□□ 1.08
SNX17-206ENST00000484886 CYP2W1Q8TAV3 490 aa21.81■■□□□ 1.08
SNX17-206ENST00000484886 KAT2BQ92831 832 aa21.81■■□□□ 1.08
SNX17-206ENST00000484886 KIF2CQ99661 725 aa21.81■■□□□ 1.08
SNX17-206ENST00000484886 KCNH7Q9NS40 1196 aa21.81■■□□□ 1.08
SNX17-206ENST00000484886 TRMT13Q9NUP7 481 aaKnown RBP21.81■■□□□ 1.08
SNX17-206ENST00000484886 PCDHA4Q9UN74 947 aa21.81■■□□□ 1.08
SNX17-206ENST00000484886 MAFGO15525 162 aa21.8■■□□□ 1.08
SNX17-206ENST00000484886 ATP9AO75110 1047 aa21.8■■□□□ 1.08
SNX17-206ENST00000484886 CTDNEP1O95476 244 aa21.8■■□□□ 1.08
SNX17-206ENST00000484886 SUPT20HL2P0C7V6 817 aa21.8■■□□□ 1.08
SNX17-206ENST00000484886 KCNA2P16389 499 aa21.8■■□□□ 1.08
SNX17-206ENST00000484886 ITGB8P26012 769 aa21.8■■□□□ 1.08
SNX17-206ENST00000484886 BMP8BP34820 402 aa21.8■■□□□ 1.08
SNX17-206ENST00000484886 KIAA0753Q2KHM9 967 aa21.8■■□□□ 1.08
SNX17-206ENST00000484886 UTP14CQ5TAP6 766 aaKnown RBP21.8■■□□□ 1.08
SNX17-206ENST00000484886 BLIDQ8IZY5 108 aa21.8■■□□□ 1.08
SNX17-206ENST00000484886 GPR20Q99678 358 aa21.8■■□□□ 1.08
SNX17-206ENST00000484886 PRO3102Q9H379 93 aa21.8■■□□□ 1.08
SNX17-206ENST00000484886 KCNJ14Q9UNX9 436 aa21.8■■□□□ 1.08
SNX17-206ENST00000484886 F2P00734 622 aa21.79■■□□□ 1.08
SNX17-206ENST00000484886 TIMP1P01033 207 aa21.79■■□□□ 1.08
SNX17-206ENST00000484886 LGALS2P05162 132 aa21.79■■□□□ 1.08
SNX17-206ENST00000484886 HOXD8P13378 290 aaPredicted RBP21.79■■□□□ 1.08
SNX17-206ENST00000484886 PTPN11Q06124 597 aaPredicted RBP21.79■■□□□ 1.08
SNX17-206ENST00000484886 RABEP1Q15276 862 aa21.79■■□□□ 1.08
SNX17-206ENST00000484886 GALNT17Q6IS24 598 aa21.79■■□□□ 1.08
SNX17-206ENST00000484886 PLA2G4DQ86XP0 818 aa21.79■■□□□ 1.08
SNX17-206ENST00000484886 SDF4Q9BRK5 362 aa21.79■■□□□ 1.08
SNX17-206ENST00000484886 HIPK3Q9H422 1215 aa21.79■■□□□ 1.08
SNX17-206ENST00000484886 TRIOBPQ9H2D6 2365 aa21.79■■□□□ 1.08
SNX17-206ENST00000484886 ARP10275 920 aa21.78■■□□□ 1.08
SNX17-206ENST00000484886 FPGSQ05932 587 aa21.78■■□□□ 1.08
SNX17-206ENST00000484886 CCDC83Q8IWF9 413 aa21.78■■□□□ 1.08
SNX17-206ENST00000484886 FAM177A1Q8N128 213 aaPredicted RBP21.78■■□□□ 1.08
SNX17-206ENST00000484886 NSUN7Q8NE18 718 aaKnown RBP21.78■■□□□ 1.08
SNX17-206ENST00000484886 JPH1Q9HDC5 661 aaPredicted RBP21.78■■□□□ 1.08
SNX17-206ENST00000484886 A0A1W2PPC1 479 aa21.77■■□□□ 1.08
SNX17-206ENST00000484886 FAM86B1E9PN63 330 aa21.77■■□□□ 1.08
SNX17-206ENST00000484886 H3BRB1 525 aa21.77■■□□□ 1.08
SNX17-206ENST00000484886 MEIS1O00470 390 aa21.77■■□□□ 1.08
SNX17-206ENST00000484886 CYP3A4P08684 503 aa21.77■■□□□ 1.08
SNX17-206ENST00000484886 FAM86B2P0C5J1 330 aa21.77■■□□□ 1.08
SNX17-206ENST00000484886 CYP2C9P11712 490 aa21.77■■□□□ 1.08
SNX17-206ENST00000484886 CYP2C18P33260 490 aa21.77■■□□□ 1.08
SNX17-206ENST00000484886 FOSBP53539 338 aa21.77■■□□□ 1.08
SNX17-206ENST00000484886 PTGISQ16647 500 aa21.77■■□□□ 1.08
SNX17-206ENST00000484886 NIPA1Q7RTP0 329 aa21.77■■□□□ 1.08
SNX17-206ENST00000484886 TDHQ8IZJ6 230 aa21.77■■□□□ 1.08
SNX17-206ENST00000484886 DAGLBQ8NCG7 672 aa21.77■■□□□ 1.08
SNX17-206ENST00000484886 ZSCAN31Q96LW9 406 aaPredicted RBP21.77■■□□□ 1.08
SNX17-206ENST00000484886 TUT1Q9H6E5 874 aaKnown RBP21.77■■□□□ 1.08
SNX17-206ENST00000484886 AGO4Q9HCK5 861 aaKnown RBP21.77■■□□□ 1.08
SNX17-206ENST00000484886 HDAC6Q9UBN7 1215 aa21.77■■□□□ 1.08
SNX17-206ENST00000484886 SLC9A2Q9UBY0 812 aa21.77■■□□□ 1.08
SNX17-206ENST00000484886 ZNF215Q9UL58 517 aaPredicted RBP21.77■■□□□ 1.08
SNX17-206ENST00000484886 TELO2Q9Y4R8 837 aa21.77■■□□□ 1.08
SNX17-206ENST00000484886 ST18O60284 1047 aa21.76■■□□□ 1.07
SNX17-206ENST00000484886 JAK2O60674 1132 aa21.76■■□□□ 1.07
SNX17-206ENST00000484886 TCF7P36402 384 aaPredicted RBP21.76■■□□□ 1.07
SNX17-206ENST00000484886 PRR16Q569H4 304 aa21.76■■□□□ 1.07
SNX17-206ENST00000484886 TRIM50Q86XT4 487 aa21.76■■□□□ 1.07
SNX17-206ENST00000484886 TMEM199Q8N511 208 aa21.76■■□□□ 1.07
SNX17-206ENST00000484886 UIMC1Q96RL1 719 aa21.76■■□□□ 1.07
SNX17-206ENST00000484886 C16orf70Q9BSU1 422 aa21.76■■□□□ 1.07
SNX17-206ENST00000484886 PHF20Q9BVI0 1012 aa21.76■■□□□ 1.07
SNX17-206ENST00000484886 NOC4LQ9BVI4 516 aaKnown RBP21.76■■□□□ 1.07
SNX17-206ENST00000484886 DDX39AO00148 427 aaKnown RBP21.75■■□□□ 1.07
SNX17-206ENST00000484886 HAS3O00219 553 aa21.75■■□□□ 1.07
SNX17-206ENST00000484886 SETQ01105 290 aaPredicted RBP21.75■■□□□ 1.07
SNX17-206ENST00000484886 TRIM29Q14134 588 aa21.75■■□□□ 1.07
SNX17-206ENST00000484886 GDF6Q6KF10 455 aaPredicted RBP21.75■■□□□ 1.07
SNX17-206ENST00000484886 MFSD5Q6N075 450 aa21.75■■□□□ 1.07
SNX17-206ENST00000484886 TBCKQ8TEA7 893 aa21.75■■□□□ 1.07
SNX17-206ENST00000484886 CRYGNQ8WXF5 182 aa21.75■■□□□ 1.07
SNX17-206ENST00000484886 SEPT1Q8WYJ6 367 aa21.75■■□□□ 1.07
SNX17-206ENST00000484886 BRMS1Q9HCU9 246 aa21.75■■□□□ 1.07
SNX17-206ENST00000484886 SH2B1Q9NRF2 756 aaPredicted RBP21.75■■□□□ 1.07
SNX17-206ENST00000484886 GJB4Q9NTQ9 266 aa21.75■■□□□ 1.07
SNX17-206ENST00000484886 GTF2IRD1Q9UHL9 959 aa21.75■■□□□ 1.07
SNX17-206ENST00000484886 NFASCO94856 1347 aa21.75■■□□□ 1.07
SNX17-206ENST00000484886 CCDC194A0A1B0GVG4 234 aa21.74■■□□□ 1.07
SNX17-206ENST00000484886 FDPSP14324 419 aaKnown RBP21.74■■□□□ 1.07
SNX17-206ENST00000484886 CCL23P55773 120 aa21.74■■□□□ 1.07
SNX17-206ENST00000484886 ITGB3BPQ13352 177 aaPredicted RBP21.74■■□□□ 1.07
SNX17-206ENST00000484886 PPIGQ13427 754 aaKnown RBP eCLIP21.74■■□□□ 1.07
SNX17-206ENST00000484886 NONOQ15233 471 aaKnown RBP eCLIP21.74■■□□□ 1.07
SNX17-206ENST00000484886 KRT25Q7Z3Z0 450 aa21.74■■□□□ 1.07
SNX17-206ENST00000484886 SESTD1Q86VW0 696 aa21.74■■□□□ 1.07
SNX17-206ENST00000484886 GLG1Q92896 1179 aa21.74■■□□□ 1.07
SNX17-206ENST00000484886 TBC1D32Q96NH3 1257 aa21.74■■□□□ 1.07
SNX17-206ENST00000484886 ZNF577Q9BSK1 485 aa21.74■■□□□ 1.07
SNX17-206ENST00000484886 TCEAL9Q9UHQ7 104 aa21.74■■□□□ 1.07
SNX17-206ENST00000484886 UMODL1Q5DID0 1318 aa21.74■■□□□ 1.07
SNX17-206ENST00000484886 IGLV3-22A0A075B6J6 115 aa21.73■■□□□ 1.07
SNX17-206ENST00000484886 IPO5O00410 1097 aaKnown RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms