RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 DTNBO60941 627 aa13.34□□□□□ -0.27
CDK5RAP2-217ENST00000484546 CLTBP09497 229 aa13.34□□□□□ -0.27
CDK5RAP2-217ENST00000484546 ITGB5P18084 799 aa13.34□□□□□ -0.27
CDK5RAP2-217ENST00000484546 MAGEA10P43363 369 aaPredicted RBP13.34□□□□□ -0.27
CDK5RAP2-217ENST00000484546 CDK7P50613 346 aa13.34□□□□□ -0.27
CDK5RAP2-217ENST00000484546 PSMC6P62333 389 aa13.34□□□□□ -0.27
CDK5RAP2-217ENST00000484546 SEMA3FQ13275 785 aa13.34□□□□□ -0.27
CDK5RAP2-217ENST00000484546 GNL2Q13823 731 aaKnown RBP13.34□□□□□ -0.27
CDK5RAP2-217ENST00000484546 NONOQ15233 471 aaKnown RBP eCLIP13.34□□□□□ -0.27
CDK5RAP2-217ENST00000484546 PLA2G4DQ86XP0 818 aa13.34□□□□□ -0.27
CDK5RAP2-217ENST00000484546 TOX2Q96NM4 488 aa13.34□□□□□ -0.27
CDK5RAP2-217ENST00000484546 LBHD1Q9BQE6 289 aaPredicted RBP13.34□□□□□ -0.27
CDK5RAP2-217ENST00000484546 PHF20Q9BVI0 1012 aa13.34□□□□□ -0.27
CDK5RAP2-217ENST00000484546 KCNH7Q9NS40 1196 aa13.34□□□□□ -0.27
CDK5RAP2-217ENST00000484546 GRIN2DO15399 1336 aa13.34□□□□□ -0.27
CDK5RAP2-217ENST00000484546 PPFIA4O75335 1185 aa13.33□□□□□ -0.28
CDK5RAP2-217ENST00000484546 CYP3A4P08684 503 aa13.33□□□□□ -0.28
CDK5RAP2-217ENST00000484546 ZNF286BP0CG31 522 aa13.33□□□□□ -0.28
CDK5RAP2-217ENST00000484546 FDPSP14324 419 aaKnown RBP13.33□□□□□ -0.28
CDK5RAP2-217ENST00000484546 HOXD11P31277 338 aaPredicted RBP13.33□□□□□ -0.28
CDK5RAP2-217ENST00000484546 SP2Q02086 613 aa13.33□□□□□ -0.28
CDK5RAP2-217ENST00000484546 HSDL1Q3SXM5 330 aa13.33□□□□□ -0.28
CDK5RAP2-217ENST00000484546 PRR16Q569H4 304 aa13.33□□□□□ -0.28
CDK5RAP2-217ENST00000484546 NIPA1Q7RTP0 329 aa13.33□□□□□ -0.28
CDK5RAP2-217ENST00000484546 SH3RF1Q7Z6J0 888 aa13.33□□□□□ -0.28
CDK5RAP2-217ENST00000484546 FAM126BQ8IXS8 530 aa13.33□□□□□ -0.28
CDK5RAP2-217ENST00000484546 SLC43A3Q8NBI5 491 aa13.33□□□□□ -0.28
CDK5RAP2-217ENST00000484546 TBCKQ8TEA7 893 aa13.33□□□□□ -0.28
CDK5RAP2-217ENST00000484546 C8orf76Q96K31 380 aa13.33□□□□□ -0.28
CDK5RAP2-217ENST00000484546 GDF15Q99988 308 aa13.33□□□□□ -0.28
CDK5RAP2-217ENST00000484546 JPH1Q9HDC5 661 aaPredicted RBP13.33□□□□□ -0.28
CDK5RAP2-217ENST00000484546 TMEM39AQ9NV64 488 aa13.33□□□□□ -0.28
CDK5RAP2-217ENST00000484546 ZNF215Q9UL58 517 aaPredicted RBP13.33□□□□□ -0.28
CDK5RAP2-217ENST00000484546 NOD1Q9Y239 953 aa13.33□□□□□ -0.28
CDK5RAP2-217ENST00000484546 DOCK5Q9H7D0 1870 aa13.33□□□□□ -0.28
CDK5RAP2-217ENST00000484546 MYH7BA7E2Y1 1941 aa13.33□□□□□ -0.28
CDK5RAP2-217ENST00000484546 TRIM43BA6NCK2 446 aa13.32□□□□□ -0.28
CDK5RAP2-217ENST00000484546 ADAMTS3O15072 1205 aa13.32□□□□□ -0.28
CDK5RAP2-217ENST00000484546 USP11P51784 963 aa13.32□□□□□ -0.28
CDK5RAP2-217ENST00000484546 FAAP100Q0VG06 881 aa13.32□□□□□ -0.28
CDK5RAP2-217ENST00000484546 ST3GAL1Q11201 340 aa13.32□□□□□ -0.28
CDK5RAP2-217ENST00000484546 UTP14CQ5TAP6 766 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP2-217ENST00000484546 PIK3AP1Q6ZUJ8 805 aa13.32□□□□□ -0.28
CDK5RAP2-217ENST00000484546 C7orf31Q8N865 590 aa13.32□□□□□ -0.28
CDK5RAP2-217ENST00000484546 TRIM43Q96BQ3 446 aaPredicted RBP13.32□□□□□ -0.28
CDK5RAP2-217ENST00000484546 TMX3Q96JJ7 454 aa13.32□□□□□ -0.28
CDK5RAP2-217ENST00000484546 NAP1L4Q99733 375 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP2-217ENST00000484546 ZNF577Q9BSK1 485 aa13.32□□□□□ -0.28
CDK5RAP2-217ENST00000484546 SLC9A2Q9UBY0 812 aa13.32□□□□□ -0.28
CDK5RAP2-217ENST00000484546 TBX21Q9UL17 535 aa13.32□□□□□ -0.28
CDK5RAP2-217ENST00000484546 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.32□□□□□ -0.28
CDK5RAP2-217ENST00000484546 FAM86B1E9PN63 330 aa13.31□□□□□ -0.28
CDK5RAP2-217ENST00000484546 DDX39AO00148 427 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP2-217ENST00000484546 MEIS1O00470 390 aa13.31□□□□□ -0.28
CDK5RAP2-217ENST00000484546 KIAA0355O15063 1070 aa13.31□□□□□ -0.28
CDK5RAP2-217ENST00000484546 MARCH6O60337 910 aa13.31□□□□□ -0.28
CDK5RAP2-217ENST00000484546 MMP1P03956 469 aa13.31□□□□□ -0.28
CDK5RAP2-217ENST00000484546 FAM86B2P0C5J1 330 aa13.31□□□□□ -0.28
CDK5RAP2-217ENST00000484546 SUPT20HL2P0C7V6 817 aa13.31□□□□□ -0.28
CDK5RAP2-217ENST00000484546 ARP10275 920 aa13.31□□□□□ -0.28
CDK5RAP2-217ENST00000484546 HOXD8P13378 290 aaPredicted RBP13.31□□□□□ -0.28
CDK5RAP2-217ENST00000484546 RAG1P15918 1043 aa13.31□□□□□ -0.28
CDK5RAP2-217ENST00000484546 KCNA2P16389 499 aa13.31□□□□□ -0.28
CDK5RAP2-217ENST00000484546 PSEN2P49810 448 aa13.31□□□□□ -0.28
CDK5RAP2-217ENST00000484546 MDM2Q00987 491 aaPredicted RBP13.31□□□□□ -0.28
CDK5RAP2-217ENST00000484546 MFSD10Q14728 455 aa13.31□□□□□ -0.28
CDK5RAP2-217ENST00000484546 INF2Q27J81 1249 aa13.31□□□□□ -0.28
CDK5RAP2-217ENST00000484546 LETM2Q2VYF4 491 aa13.31□□□□□ -0.28
CDK5RAP2-217ENST00000484546 NBPF20Q3BBV1 942 aa13.31□□□□□ -0.28
CDK5RAP2-217ENST00000484546 HABP4Q5JVS0 413 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP2-217ENST00000484546 KRT40Q6A162 431 aa13.31□□□□□ -0.28
CDK5RAP2-217ENST00000484546 NFRKBQ6P4R8 1299 aa13.31□□□□□ -0.28
CDK5RAP2-217ENST00000484546 CYP2W1Q8TAV3 490 aa13.31□□□□□ -0.28
CDK5RAP2-217ENST00000484546 GPR20Q99678 358 aa13.31□□□□□ -0.28
CDK5RAP2-217ENST00000484546 AGO4Q9HCK5 861 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP2-217ENST00000484546 GJB4Q9NTQ9 266 aa13.31□□□□□ -0.28
CDK5RAP2-217ENST00000484546 TRIOBPQ9H2D6 2365 aa13.3□□□□□ -0.28
CDK5RAP2-217ENST00000484546 IPO5O00410 1097 aaKnown RBP13.3□□□□□ -0.28
CDK5RAP2-217ENST00000484546 ATP9AO75110 1047 aa13.3□□□□□ -0.28
CDK5RAP2-217ENST00000484546 CD4P01730 458 aa13.3□□□□□ -0.28
CDK5RAP2-217ENST00000484546 LGALS2P05162 132 aa13.3□□□□□ -0.28
CDK5RAP2-217ENST00000484546 ITGB8P26012 769 aa13.3□□□□□ -0.28
CDK5RAP2-217ENST00000484546 BMP8BP34820 402 aa13.3□□□□□ -0.28
CDK5RAP2-217ENST00000484546 TCF7P36402 384 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP2-217ENST00000484546 GUCY1B3Q02153 619 aa13.3□□□□□ -0.28
CDK5RAP2-217ENST00000484546 PTPN11Q06124 597 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP2-217ENST00000484546 KIAA0753Q2KHM9 967 aa13.3□□□□□ -0.28
CDK5RAP2-217ENST00000484546 NEK8Q86SG6 692 aa13.3□□□□□ -0.28
CDK5RAP2-217ENST00000484546 DIS3L2Q8IYB7 885 aaKnown RBP13.3□□□□□ -0.28
CDK5RAP2-217ENST00000484546 SEPT1Q8WYJ6 367 aa13.3□□□□□ -0.28
CDK5RAP2-217ENST00000484546 KAT2BQ92831 832 aa13.3□□□□□ -0.28
CDK5RAP2-217ENST00000484546 GLG1Q92896 1179 aa13.3□□□□□ -0.28
CDK5RAP2-217ENST00000484546 AZI2Q9H6S1 392 aa13.3□□□□□ -0.28
CDK5RAP2-217ENST00000484546 BCAS3Q9H6U6 928 aa13.3□□□□□ -0.28
CDK5RAP2-217ENST00000484546 TBC1D22BQ9NU19 505 aa13.3□□□□□ -0.28
CDK5RAP2-217ENST00000484546 DDX25Q9UHL0 483 aaKnown RBP13.3□□□□□ -0.28
CDK5RAP2-217ENST00000484546 SMC3Q9UQE7 1217 aa13.3□□□□□ -0.28
CDK5RAP2-217ENST00000484546 NFASCO94856 1347 aa13.3□□□□□ -0.28
CDK5RAP2-217ENST00000484546 H3BRB1 525 aa13.29□□□□□ -0.28
CDK5RAP2-217ENST00000484546 CCNT1O60563 726 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms