RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 PTPN11Q06124 597 aaPredicted RBP14.05□□□□□ -0.16
MSH5-216ENST00000484309 MTMR1Q13613 665 aa14.05□□□□□ -0.16
MSH5-216ENST00000484309 TMEM240Q5SV17 173 aa14.05□□□□□ -0.16
MSH5-216ENST00000484309 UTP14CQ5TAP6 766 aaKnown RBP14.05□□□□□ -0.16
MSH5-216ENST00000484309 METTL7BQ6UX53 244 aa14.05□□□□□ -0.16
MSH5-216ENST00000484309 ZNF365Q70YC5 407 aa14.05□□□□□ -0.16
MSH5-216ENST00000484309 TRIM50Q86XT4 487 aa14.05□□□□□ -0.16
MSH5-216ENST00000484309 C7orf31Q8N865 590 aa14.05□□□□□ -0.16
MSH5-216ENST00000484309 CYP2W1Q8TAV3 490 aa14.05□□□□□ -0.16
MSH5-216ENST00000484309 RASGRP4Q8TDF6 673 aa14.05□□□□□ -0.16
MSH5-216ENST00000484309 GPRASP2Q96D09 838 aa14.05□□□□□ -0.16
MSH5-216ENST00000484309 GPR20Q99678 358 aa14.05□□□□□ -0.16
MSH5-216ENST00000484309 C16orf70Q9BSU1 422 aa14.05□□□□□ -0.16
MSH5-216ENST00000484309 KATNAL1Q9BW62 490 aa14.05□□□□□ -0.16
MSH5-216ENST00000484309 RNF26Q9BY78 433 aaPredicted RBP14.05□□□□□ -0.16
MSH5-216ENST00000484309 IL23AQ9NPF7 189 aa14.05□□□□□ -0.16
MSH5-216ENST00000484309 VPS54Q9P1Q0 977 aa14.05□□□□□ -0.16
MSH5-216ENST00000484309 LOXHD1Q8IVV2 1947 aa14.04□□□□□ -0.16
MSH5-216ENST00000484309 HAS3O00219 553 aa14.04□□□□□ -0.16
MSH5-216ENST00000484309 CPLX1O14810 134 aa14.04□□□□□ -0.16
MSH5-216ENST00000484309 PPFIA4O75335 1185 aa14.04□□□□□ -0.16
MSH5-216ENST00000484309 KCNA2P16389 499 aa14.04□□□□□ -0.16
MSH5-216ENST00000484309 CLK2P49760 499 aaKnown RBP14.04□□□□□ -0.16
MSH5-216ENST00000484309 HIC1Q14526 733 aa14.04□□□□□ -0.16
MSH5-216ENST00000484309 DEFB128Q7Z7B8 93 aa14.04□□□□□ -0.16
MSH5-216ENST00000484309 ZNF274Q96GC6 653 aaPredicted RBP14.04□□□□□ -0.16
MSH5-216ENST00000484309 UIMC1Q96RL1 719 aa14.04□□□□□ -0.16
MSH5-216ENST00000484309 CTAGE1Q96RT6 745 aa14.04□□□□□ -0.16
MSH5-216ENST00000484309 C6orf50Q9HD87 102 aa14.04□□□□□ -0.16
MSH5-216ENST00000484309 JADE2Q9NQC1 790 aa14.04□□□□□ -0.16
MSH5-216ENST00000484309 GTF2IRD1Q9UHL9 959 aa14.04□□□□□ -0.16
MSH5-216ENST00000484309 MYO9BQ13459 2157 aa14.04□□□□□ -0.16
MSH5-216ENST00000484309 SIP14410 1827 aa14.04□□□□□ -0.16
MSH5-216ENST00000484309 H3BRB1 525 aa14.03□□□□□ -0.16
MSH5-216ENST00000484309 FOSP01100 380 aaPredicted RBP14.03□□□□□ -0.16
MSH5-216ENST00000484309 ARP10275 920 aa14.03□□□□□ -0.16
MSH5-216ENST00000484309 AK2P54819 239 aa14.03□□□□□ -0.16
MSH5-216ENST00000484309 SSRP1Q08945 709 aaKnown RBP14.03□□□□□ -0.16
MSH5-216ENST00000484309 AP3B2Q13367 1082 aa14.03□□□□□ -0.16
MSH5-216ENST00000484309 FAM109BQ6ICB4 259 aaPredicted RBP14.03□□□□□ -0.16
MSH5-216ENST00000484309 PSRC1Q6PGN9 363 aaPredicted RBP14.03□□□□□ -0.16
MSH5-216ENST00000484309 SESTD1Q86VW0 696 aa14.03□□□□□ -0.16
MSH5-216ENST00000484309 REXO1Q8N1G1 1221 aaKnown RBP14.03□□□□□ -0.16
MSH5-216ENST00000484309 DEFB123Q8N688 67 aa14.03□□□□□ -0.16
MSH5-216ENST00000484309 CCDC12Q8WUD4 166 aaPredicted RBP14.03□□□□□ -0.16
MSH5-216ENST00000484309 DHX38Q92620 1227 aaKnown RBP14.03□□□□□ -0.16
MSH5-216ENST00000484309 FAM161BQ96MY7 647 aa14.03□□□□□ -0.16
MSH5-216ENST00000484309 AIFM3Q96NN9 605 aa14.03□□□□□ -0.16
MSH5-216ENST00000484309 SENP7Q9BQF6 1050 aa14.03□□□□□ -0.16
MSH5-216ENST00000484309 MXRA8Q9BRK3 442 aa14.03□□□□□ -0.16
MSH5-216ENST00000484309 ZMYND12Q9H0C1 365 aa14.03□□□□□ -0.16
MSH5-216ENST00000484309 GLT8D2Q9H1C3 349 aa14.03□□□□□ -0.16
MSH5-216ENST00000484309 TUT1Q9H6E5 874 aaKnown RBP14.03□□□□□ -0.16
MSH5-216ENST00000484309 ESYT2A0FGR8 921 aa14.02□□□□□ -0.17
MSH5-216ENST00000484309 GRXCR1A8MXD5 290 aa14.02□□□□□ -0.17
MSH5-216ENST00000484309 TCF7P36402 384 aaPredicted RBP14.02□□□□□ -0.17
MSH5-216ENST00000484309 ZNF76P36508 570 aa14.02□□□□□ -0.17
MSH5-216ENST00000484309 SREBF1P36956 1147 aa14.02□□□□□ -0.17
MSH5-216ENST00000484309 ANAPC15P60006 121 aa14.02□□□□□ -0.17
MSH5-216ENST00000484309 ARHGAP4P98171 946 aa14.02□□□□□ -0.17
MSH5-216ENST00000484309 SCRN1Q12765 414 aa14.02□□□□□ -0.17
MSH5-216ENST00000484309 OTOP2Q7RTS6 562 aa14.02□□□□□ -0.17
MSH5-216ENST00000484309 TRIM22Q8IYM9 498 aa14.02□□□□□ -0.17
MSH5-216ENST00000484309 RETREG2Q8NC44 543 aa14.02□□□□□ -0.17
MSH5-216ENST00000484309 CCDC148Q8NFR7 591 aa14.02□□□□□ -0.17
MSH5-216ENST00000484309 WNT8BQ93098 351 aa14.02□□□□□ -0.17
MSH5-216ENST00000484309 VWCEQ96DN2 955 aa14.02□□□□□ -0.17
MSH5-216ENST00000484309 CDHR1Q96JP9 859 aa14.02□□□□□ -0.17
MSH5-216ENST00000484309 KCNH7Q9NS40 1196 aa14.02□□□□□ -0.17
MSH5-216ENST00000484309 CXXC1Q9P0U4 656 aaPredicted RBP14.02□□□□□ -0.17
MSH5-216ENST00000484309 TPCN1Q9ULQ1 816 aa14.02□□□□□ -0.17
MSH5-216ENST00000484309 GSTTP1A0A1W2PQM5 241 aa14.01□□□□□ -0.17
MSH5-216ENST00000484309 DDX39AO00148 427 aaKnown RBP14.01□□□□□ -0.17
MSH5-216ENST00000484309 FGBP02675 491 aa14.01□□□□□ -0.17
MSH5-216ENST00000484309 IQCF3P0C7M6 154 aa14.01□□□□□ -0.17
MSH5-216ENST00000484309 SMIM10L2AP0DMW4 78 aa14.01□□□□□ -0.17
MSH5-216ENST00000484309 SMIM10L2BP0DMW5 78 aa14.01□□□□□ -0.17
MSH5-216ENST00000484309 BFSP2Q13515 415 aa14.01□□□□□ -0.17
MSH5-216ENST00000484309 CEP55Q53EZ4 464 aa14.01□□□□□ -0.17
MSH5-216ENST00000484309 CCDC155Q8N6L0 562 aa14.01□□□□□ -0.17
MSH5-216ENST00000484309 GIMAP8Q8ND71 665 aaPredicted RBP14.01□□□□□ -0.17
MSH5-216ENST00000484309 SLKQ9H2G2 1235 aaPredicted RBP14.01□□□□□ -0.17
MSH5-216ENST00000484309 MICAL3Q7RTP6 2002 aa14.01□□□□□ -0.17
MSH5-216ENST00000484309 EVPLQ92817 2033 aa14.01□□□□□ -0.17
MSH5-216ENST00000484309 C17orf102A2RUQ5 167 aa14□□□□□ -0.17
MSH5-216ENST00000484309 ZBBXA8MT70 800 aa14□□□□□ -0.17
MSH5-216ENST00000484309 FAM86B1E9PN63 330 aa14□□□□□ -0.17
MSH5-216ENST00000484309 PITPNM1O00562 1244 aa14□□□□□ -0.17
MSH5-216ENST00000484309 DEXIO95424 95 aa14□□□□□ -0.17
MSH5-216ENST00000484309 LARGE1O95461 756 aa14□□□□□ -0.17
MSH5-216ENST00000484309 FAM86B2P0C5J1 330 aa14□□□□□ -0.17
MSH5-216ENST00000484309 MARK3P27448 753 aa14□□□□□ -0.17
MSH5-216ENST00000484309 GNA11P29992 359 aa14□□□□□ -0.17
MSH5-216ENST00000484309 NLRP5P59047 1200 aa14□□□□□ -0.17
MSH5-216ENST00000484309 ITGB3BPQ13352 177 aaPredicted RBP14□□□□□ -0.17
MSH5-216ENST00000484309 GPR153Q6NV75 609 aa14□□□□□ -0.17
MSH5-216ENST00000484309 CPLX2Q6PUV4 134 aaKnown RBP14□□□□□ -0.17
MSH5-216ENST00000484309 PLA2G4DQ86XP0 818 aa14□□□□□ -0.17
MSH5-216ENST00000484309 RPUSD2Q8IZ73 545 aaKnown RBP14□□□□□ -0.17
MSH5-216ENST00000484309 RNPEPQ9H4A4 650 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms