RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 DDR2Q16832 855 aa7.2□□□□□ -1.26
SCAF11-207ENST00000484275 PHF19Q5T6S3 580 aa7.2□□□□□ -1.26
SCAF11-207ENST00000484275 PKN3Q6P5Z2 889 aa7.2□□□□□ -1.26
SCAF11-207ENST00000484275 USP53Q70EK8 1073 aa7.2□□□□□ -1.26
SCAF11-207ENST00000484275 RBM12BQ8IXT5 1001 aaKnown RBP7.2□□□□□ -1.26
SCAF11-207ENST00000484275 PHOSPHO1Q8TCT1 267 aa7.2□□□□□ -1.26
SCAF11-207ENST00000484275 TMEM209Q96SK2 561 aa7.2□□□□□ -1.26
SCAF11-207ENST00000484275 PHF20Q9BVI0 1012 aa7.2□□□□□ -1.26
SCAF11-207ENST00000484275 TMEM168Q9H0V1 697 aa7.2□□□□□ -1.26
SCAF11-207ENST00000484275 L2HGDHQ9H9P8 463 aa7.2□□□□□ -1.26
SCAF11-207ENST00000484275 SLC6A20Q9NP91 592 aa7.2□□□□□ -1.26
SCAF11-207ENST00000484275 HSPBP1Q9NZL4 362 aa7.2□□□□□ -1.26
SCAF11-207ENST00000484275 AGRPO00253 132 aa7.19□□□□□ -1.26
SCAF11-207ENST00000484275 SLC27A2O14975 620 aa7.19□□□□□ -1.26
SCAF11-207ENST00000484275 KLF4O43474 513 aa7.19□□□□□ -1.26
SCAF11-207ENST00000484275 LAMTOR5O43504 91 aa7.19□□□□□ -1.26
SCAF11-207ENST00000484275 DNAJA1P31689 397 aaKnown RBP7.19□□□□□ -1.26
SCAF11-207ENST00000484275 NTRK3Q16288 839 aa7.19□□□□□ -1.26
SCAF11-207ENST00000484275 KCNT2Q6UVM3 1135 aa7.19□□□□□ -1.26
SCAF11-207ENST00000484275 ANKS3Q6ZW76 656 aa7.19□□□□□ -1.26
SCAF11-207ENST00000484275 IGDCC4Q8TDY8 1250 aa7.19□□□□□ -1.26
SCAF11-207ENST00000484275 C1QTNF3-AMACRE9PGA6 284 aa7.18□□□□□ -1.26
SCAF11-207ENST00000484275 LTFP02788 710 aa7.18□□□□□ -1.26
SCAF11-207ENST00000484275 GRIN1Q05586 938 aa7.18□□□□□ -1.26
SCAF11-207ENST00000484275 ICAM4Q14773 271 aa7.18□□□□□ -1.26
SCAF11-207ENST00000484275 CYP4F22Q6NT55 531 aa7.18□□□□□ -1.26
SCAF11-207ENST00000484275 GLB1LQ6UWU2 654 aa7.18□□□□□ -1.26
SCAF11-207ENST00000484275 OSBP2Q969R2 916 aa7.18□□□□□ -1.26
SCAF11-207ENST00000484275 PTPN18Q99952 460 aa7.18□□□□□ -1.26
SCAF11-207ENST00000484275 ARHGEF4Q9NR80 690 aa7.18□□□□□ -1.26
SCAF11-207ENST00000484275 TELO2Q9Y4R8 837 aa7.18□□□□□ -1.26
SCAF11-207ENST00000484275 GPR42O15529 346 aa7.17□□□□□ -1.26
SCAF11-207ENST00000484275 CDSNQ15517 529 aa7.17□□□□□ -1.26
SCAF11-207ENST00000484275 RSPO2Q6UXX9 243 aaPredicted RBP7.17□□□□□ -1.26
SCAF11-207ENST00000484275 OTOP3Q7RTS5 596 aa7.17□□□□□ -1.26
SCAF11-207ENST00000484275 TTLL11Q8NHH1 800 aa7.17□□□□□ -1.26
SCAF11-207ENST00000484275 BLACEA4D250 179 aa7.16□□□□□ -1.26
SCAF11-207ENST00000484275 KRIT1O00522 736 aa7.16□□□□□ -1.26
SCAF11-207ENST00000484275 PRODHO43272 600 aa7.16□□□□□ -1.26
SCAF11-207ENST00000484275 COL6A2P12110 1019 aa7.16□□□□□ -1.26
SCAF11-207ENST00000484275 YOD1Q5VVQ6 348 aaPredicted RBP7.16□□□□□ -1.26
SCAF11-207ENST00000484275 TRMT10BQ6PF06 316 aaKnown RBP7.16□□□□□ -1.26
SCAF11-207ENST00000484275 LBX2Q6XYB7 198 aa7.16□□□□□ -1.26
SCAF11-207ENST00000484275 KBTBD2Q8IY47 623 aa7.16□□□□□ -1.26
SCAF11-207ENST00000484275 DTX3Q8N9I9 347 aa7.16□□□□□ -1.26
SCAF11-207ENST00000484275 NUDT10Q8NFP7 164 aa7.16□□□□□ -1.26
SCAF11-207ENST00000484275 NUDT11Q96G61 164 aa7.16□□□□□ -1.26
SCAF11-207ENST00000484275 SGSM3Q96HU1 749 aa7.16□□□□□ -1.26
SCAF11-207ENST00000484275 GMLQ99445 158 aa7.16□□□□□ -1.26
SCAF11-207ENST00000484275 AARSD1Q9BTE6 412 aaKnown RBP7.16□□□□□ -1.26
SCAF11-207ENST00000484275 NKRFO15226 690 aaKnown RBP eCLIP7.15□□□□□ -1.26
SCAF11-207ENST00000484275 MAFKO60675 156 aa7.15□□□□□ -1.26
SCAF11-207ENST00000484275 GRK2P25098 689 aa7.15□□□□□ -1.26
SCAF11-207ENST00000484275 GRK3P35626 688 aa7.15□□□□□ -1.26
SCAF11-207ENST00000484275 TUSC3Q13454 348 aa7.15□□□□□ -1.26
SCAF11-207ENST00000484275 HSP90AA2PQ14568 343 aaPredicted RBP7.15□□□□□ -1.26
SCAF11-207ENST00000484275 SURF1Q15526 300 aa7.15□□□□□ -1.26
SCAF11-207ENST00000484275 HABP4Q5JVS0 413 aaKnown RBP7.15□□□□□ -1.26
SCAF11-207ENST00000484275 CHST13Q8NET6 341 aa7.15□□□□□ -1.26
SCAF11-207ENST00000484275 UHMK1Q8TAS1 419 aaKnown RBP7.15□□□□□ -1.26
SCAF11-207ENST00000484275 DVL3Q92997 716 aaPredicted RBP7.15□□□□□ -1.26
SCAF11-207ENST00000484275 CD248Q9HCU0 757 aa7.15□□□□□ -1.26
SCAF11-207ENST00000484275 FTSJ1Q9UET6 329 aa7.15□□□□□ -1.26
SCAF11-207ENST00000484275 R3HCC1Q9Y3T6 440 aaKnown RBP7.15□□□□□ -1.26
SCAF11-207ENST00000484275 CYP7B1O75881 506 aa7.14□□□□□ -1.27
SCAF11-207ENST00000484275 KLHL18O94889 574 aa7.14□□□□□ -1.27
SCAF11-207ENST00000484275 FGFR1P11362 822 aa7.14□□□□□ -1.27
SCAF11-207ENST00000484275 PABPC1P11940 636 aaKnown RBP7.14□□□□□ -1.27
SCAF11-207ENST00000484275 EPHB4P54760 987 aa7.14□□□□□ -1.27
SCAF11-207ENST00000484275 PPP2CBP62714 309 aa7.14□□□□□ -1.27
SCAF11-207ENST00000484275 PPP2CAP67775 309 aa7.14□□□□□ -1.27
SCAF11-207ENST00000484275 ZXDAP98168 799 aa7.14□□□□□ -1.27
SCAF11-207ENST00000484275 NFATC3Q12968 1075 aa7.14□□□□□ -1.27
SCAF11-207ENST00000484275 PLEKHH3Q7Z736 793 aa7.14□□□□□ -1.27
SCAF11-207ENST00000484275 TRIM48Q8IWZ4 208 aa7.14□□□□□ -1.27
SCAF11-207ENST00000484275 KLHL36Q8N4N3 616 aa7.14□□□□□ -1.27
SCAF11-207ENST00000484275 DNERQ8NFT8 737 aa7.14□□□□□ -1.27
SCAF11-207ENST00000484275 DCAF4Q8WV16 495 aa7.14□□□□□ -1.27
SCAF11-207ENST00000484275 WRNIP1Q96S55 665 aa7.14□□□□□ -1.27
SCAF11-207ENST00000484275 KCNJ15Q99712 375 aa7.14□□□□□ -1.27
SCAF11-207ENST00000484275 PDGFDQ9GZP0 370 aaPredicted RBP7.14□□□□□ -1.27
SCAF11-207ENST00000484275 ASXL2Q76L83 1435 aa7.13□□□□□ -1.27
SCAF11-207ENST00000484275 NPEPPSL1A6NEC2 478 aa7.13□□□□□ -1.27
SCAF11-207ENST00000484275 AKAP8O43823 692 aaKnown RBP7.13□□□□□ -1.27
SCAF11-207ENST00000484275 B4GALT4O60513 344 aa7.13□□□□□ -1.27
SCAF11-207ENST00000484275 CKMP06732 381 aa7.13□□□□□ -1.27
SCAF11-207ENST00000484275 FAHP16930 419 aa7.13□□□□□ -1.27
SCAF11-207ENST00000484275 PAN2Q504Q3 1202 aaKnown RBP7.13□□□□□ -1.27
SCAF11-207ENST00000484275 VASNQ6EMK4 673 aa7.13□□□□□ -1.27
SCAF11-207ENST00000484275 STYK1Q6J9G0 422 aa7.13□□□□□ -1.27
SCAF11-207ENST00000484275 SLC43A3Q8NBI5 491 aa7.13□□□□□ -1.27
SCAF11-207ENST00000484275 WWC2-AS2Q96NR7 200 aa7.13□□□□□ -1.27
SCAF11-207ENST00000484275 MEGF9Q9H1U4 602 aa7.13□□□□□ -1.27
SCAF11-207ENST00000484275 DLL4Q9NR61 685 aa7.13□□□□□ -1.27
SCAF11-207ENST00000484275 ZDHHC9Q9Y397 364 aa7.13□□□□□ -1.27
SCAF11-207ENST00000484275 GPR85P60893 370 aa7.12□□□□□ -1.27
SCAF11-207ENST00000484275 KIZQ2M2Z5 673 aa7.12□□□□□ -1.27
SCAF11-207ENST00000484275 NSMFQ6X4W1 530 aa7.12□□□□□ -1.27
SCAF11-207ENST00000484275 SPRED1Q7Z699 444 aa7.12□□□□□ -1.27
SCAF11-207ENST00000484275 ADAM29Q9UKF5 820 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms