RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 LSM14BQ9BX40 385 aaKnown RBP21.72■■□□□ 1.07
RPUSD3-216ENST00000484134 CNOT8Q9UFF9 292 aaKnown RBP21.72■■□□□ 1.07
RPUSD3-216ENST00000484134 SMCO2A6NFE2 343 aa21.71■■□□□ 1.07
RPUSD3-216ENST00000484134 FLT3P36888 993 aa21.71■■□□□ 1.07
RPUSD3-216ENST00000484134 LRIG3Q6UXM1 1119 aa21.71■■□□□ 1.07
RPUSD3-216ENST00000484134 TBCKQ8TEA7 893 aa21.71■■□□□ 1.07
RPUSD3-216ENST00000484134 LARP4BQ92615 738 aaKnown RBP21.71■■□□□ 1.07
RPUSD3-216ENST00000484134 SYN2Q92777 582 aaPredicted RBP21.71■■□□□ 1.07
RPUSD3-216ENST00000484134 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.71■■□□□ 1.07
RPUSD3-216ENST00000484134 GCOM1H8Y6P7 765 aaPredicted RBP21.71■■□□□ 1.07
RPUSD3-216ENST00000484134 TRAPPC3O43617 180 aa21.71■■□□□ 1.07
RPUSD3-216ENST00000484134 MYZAPP0CAP1 466 aa21.71■■□□□ 1.07
RPUSD3-216ENST00000484134 TNNC1P63316 161 aa21.71■■□□□ 1.07
RPUSD3-216ENST00000484134 BYSLQ13895 437 aaKnown RBP21.71■■□□□ 1.07
RPUSD3-216ENST00000484134 PTPROQ16827 1216 aa21.71■■□□□ 1.07
RPUSD3-216ENST00000484134 PARP10Q53GL7 1025 aa21.71■■□□□ 1.07
RPUSD3-216ENST00000484134 KCNK3O14649 394 aa21.7■■□□□ 1.06
RPUSD3-216ENST00000484134 MMP14P50281 582 aa21.7■■□□□ 1.06
RPUSD3-216ENST00000484134 C12orf60Q5U649 245 aa21.7■■□□□ 1.06
RPUSD3-216ENST00000484134 FAM228AQ86W67 206 aa21.7■■□□□ 1.06
RPUSD3-216ENST00000484134 DNAAF5Q86Y56 855 aa21.7■■□□□ 1.06
RPUSD3-216ENST00000484134 SLC44A5Q8NCS7 719 aa21.7■■□□□ 1.06
RPUSD3-216ENST00000484134 TMEM47Q9BQJ4 181 aa21.7■■□□□ 1.06
RPUSD3-216ENST00000484134 LRRC4CQ9HCJ2 640 aa21.7■■□□□ 1.06
RPUSD3-216ENST00000484134 DCDC2CA8MYV0 355 aa21.7■■□□□ 1.06
RPUSD3-216ENST00000484134 KLRF2D3W0D1 207 aa21.7■■□□□ 1.06
RPUSD3-216ENST00000484134 PSEN1P49768 467 aa21.7■■□□□ 1.06
RPUSD3-216ENST00000484134 PREPLQ4J6C6 727 aaPredicted RBP21.7■■□□□ 1.06
RPUSD3-216ENST00000484134 CCDC121Q6ZUS5 278 aa21.7■■□□□ 1.06
RPUSD3-216ENST00000484134 PAXIP1Q6ZW49 1069 aaPredicted RBP21.7■■□□□ 1.06
RPUSD3-216ENST00000484134 SCFD2Q8WU76 684 aa21.7■■□□□ 1.06
RPUSD3-216ENST00000484134 DDX12PQ92771 950 aa21.7■■□□□ 1.06
RPUSD3-216ENST00000484134 CCDC114Q96M63 670 aa21.7■■□□□ 1.06
RPUSD3-216ENST00000484134 TMEM260Q9NX78 707 aa21.7■■□□□ 1.06
RPUSD3-216ENST00000484134 BIN2Q9UBW5 565 aaPredicted RBP21.7■■□□□ 1.06
RPUSD3-216ENST00000484134 MCM8Q9UJA3 840 aa21.7■■□□□ 1.06
RPUSD3-216ENST00000484134 GOLGA6L10A6NI86 522 aa21.69■■□□□ 1.06
RPUSD3-216ENST00000484134 PDHBP11177 359 aa21.69■■□□□ 1.06
RPUSD3-216ENST00000484134 ZCWPW2Q504Y3 356 aa21.69■■□□□ 1.06
RPUSD3-216ENST00000484134 MTMR9Q96QG7 549 aa21.69■■□□□ 1.06
RPUSD3-216ENST00000484134 TFCP2L1Q9NZI6 479 aa21.69■■□□□ 1.06
RPUSD3-216ENST00000484134 LEMD3Q9Y2U8 911 aa21.69■■□□□ 1.06
RPUSD3-216ENST00000484134 COL4A3BPQ9Y5P4 624 aa21.69■■□□□ 1.06
RPUSD3-216ENST00000484134 SCN7AQ01118 1682 aa21.69■■□□□ 1.06
RPUSD3-216ENST00000484134 PHLPP1O60346 1717 aa21.69■■□□□ 1.06
RPUSD3-216ENST00000484134 DRP2Q13474 957 aa21.69■■□□□ 1.06
RPUSD3-216ENST00000484134 RAPGEF1Q13905 1077 aa21.69■■□□□ 1.06
RPUSD3-216ENST00000484134 FAM133AQ8N9E0 248 aa21.69■■□□□ 1.06
RPUSD3-216ENST00000484134 AP1M1Q9BXS5 423 aa21.69■■□□□ 1.06
RPUSD3-216ENST00000484134 FGFBP2Q9BYJ0 223 aa21.69■■□□□ 1.06
RPUSD3-216ENST00000484134 BCCIPQ9P287 314 aaKnown RBP eCLIP21.69■■□□□ 1.06
RPUSD3-216ENST00000484134 STX8Q9UNK0 236 aa21.69■■□□□ 1.06
RPUSD3-216ENST00000484134 POTEMA6NI47 508 aa21.68■■□□□ 1.06
RPUSD3-216ENST00000484134 BHMG1C9JSJ3 638 aaPredicted RBP21.68■■□□□ 1.06
RPUSD3-216ENST00000484134 TRAF5O00463 557 aa21.68■■□□□ 1.06
RPUSD3-216ENST00000484134 EDIL3O43854 480 aa21.68■■□□□ 1.06
RPUSD3-216ENST00000484134 CTNNA1P35221 906 aaKnown RBP21.68■■□□□ 1.06
RPUSD3-216ENST00000484134 ARFGAP2Q8N6H7 521 aa21.68■■□□□ 1.06
RPUSD3-216ENST00000484134 BSDC1Q9NW68 430 aaPredicted RBP21.68■■□□□ 1.06
RPUSD3-216ENST00000484134 STK17AQ9UEE5 414 aa21.68■■□□□ 1.06
RPUSD3-216ENST00000484134 MYH4Q9Y623 1939 aa21.68■■□□□ 1.06
RPUSD3-216ENST00000484134 CHRM1P11229 460 aaPredicted RBP21.68■■□□□ 1.06
RPUSD3-216ENST00000484134 IBSPP21815 317 aaPredicted RBP21.68■■□□□ 1.06
RPUSD3-216ENST00000484134 ARHGAP27Q6ZUM4 889 aa21.68■■□□□ 1.06
RPUSD3-216ENST00000484134 TEX2Q8IWB9 1127 aa21.68■■□□□ 1.06
RPUSD3-216ENST00000484134 FUKQ8N0W3 1084 aa21.68■■□□□ 1.06
RPUSD3-216ENST00000484134 RAD54LQ92698 747 aa21.68■■□□□ 1.06
RPUSD3-216ENST00000484134 SEC16BQ96JE7 1060 aa21.68■■□□□ 1.06
RPUSD3-216ENST00000484134 CCDC87Q9NVE4 849 aa21.68■■□□□ 1.06
RPUSD3-216ENST00000484134 FBXL5Q9UKA1 691 aa21.68■■□□□ 1.06
RPUSD3-216ENST00000484134 SLC37A4O43826 429 aa21.67■■□□□ 1.06
RPUSD3-216ENST00000484134 CRKLP46109 303 aaKnown RBP21.67■■□□□ 1.06
RPUSD3-216ENST00000484134 RPS6KA1Q15418 735 aa21.67■■□□□ 1.06
RPUSD3-216ENST00000484134 ANKRD20A8PQ5CZ79 823 aa21.67■■□□□ 1.06
RPUSD3-216ENST00000484134 WLSQ5T9L3 541 aa21.67■■□□□ 1.06
RPUSD3-216ENST00000484134 RPAINQ86UA6 219 aa21.67■■□□□ 1.06
RPUSD3-216ENST00000484134 RAPGEF5Q92565 580 aa21.67■■□□□ 1.06
RPUSD3-216ENST00000484134 NUCKS1Q9H1E3 243 aaKnown RBP21.67■■□□□ 1.06
RPUSD3-216ENST00000484134 MKNK2Q9HBH9 465 aa21.67■■□□□ 1.06
RPUSD3-216ENST00000484134 RIC8AQ9NPQ8 531 aa21.67■■□□□ 1.06
RPUSD3-216ENST00000484134 HAUS2Q9NVX0 235 aa21.67■■□□□ 1.06
RPUSD3-216ENST00000484134 DONSONQ9NYP3 566 aa21.67■■□□□ 1.06
RPUSD3-216ENST00000484134 KIF4AO95239 1232 aa21.67■■□□□ 1.06
RPUSD3-216ENST00000484134 SSBP05455 408 aaKnown RBP eCLIP21.67■■□□□ 1.06
RPUSD3-216ENST00000484134 TSPY3P0CV98 308 aa21.67■■□□□ 1.06
RPUSD3-216ENST00000484134 TSPY8P0CW00 308 aa21.67■■□□□ 1.06
RPUSD3-216ENST00000484134 ZBTB48P10074 688 aaPredicted RBP21.67■■□□□ 1.06
RPUSD3-216ENST00000484134 RDXP35241 583 aaKnown RBP21.67■■□□□ 1.06
RPUSD3-216ENST00000484134 KLHL30Q0D2K2 578 aa21.67■■□□□ 1.06
RPUSD3-216ENST00000484134 ECM1Q16610 540 aa21.67■■□□□ 1.06
RPUSD3-216ENST00000484134 CYB5D1Q6P9G0 228 aa21.67■■□□□ 1.06
RPUSD3-216ENST00000484134 CELF1Q92879 486 aaKnown RBP21.67■■□□□ 1.06
RPUSD3-216ENST00000484134 TSG101Q99816 390 aa21.67■■□□□ 1.06
RPUSD3-216ENST00000484134 LUC7LQ9NQ29 371 aaKnown RBP21.67■■□□□ 1.06
RPUSD3-216ENST00000484134 SUFUQ9UMX1 484 aa21.67■■□□□ 1.06
RPUSD3-216ENST00000484134 SART1O43290 800 aaKnown RBP21.66■■□□□ 1.06
RPUSD3-216ENST00000484134 CEP104O60308 925 aa21.66■■□□□ 1.06
RPUSD3-216ENST00000484134 FKBP3Q00688 224 aaKnown RBP21.66■■□□□ 1.06
RPUSD3-216ENST00000484134 CUL1Q13616 776 aa21.66■■□□□ 1.06
RPUSD3-216ENST00000484134 ERFEQ4G0M1 354 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms