RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 VSIG10LQ86VR7 867 aa15.75■□□□□ 0.11
SMAD9-204ENST00000483941 PLA2G4DQ86XP0 818 aa15.75■□□□□ 0.11
SMAD9-204ENST00000483941 POTEDQ86YR6 584 aa15.75■□□□□ 0.11
SMAD9-204ENST00000483941 ANKLE1Q8NAG6 615 aa15.75■□□□□ 0.11
SMAD9-204ENST00000483941 ERMNQ8TAM6 284 aa15.75■□□□□ 0.11
SMAD9-204ENST00000483941 TIGD1Q96MW7 591 aa15.75■□□□□ 0.11
SMAD9-204ENST00000483941 KCNMB3Q9NPA1 279 aa15.75■□□□□ 0.11
SMAD9-204ENST00000483941 TCEAL9Q9UHQ7 104 aa15.75■□□□□ 0.11
SMAD9-204ENST00000483941 KCNH3Q9ULD8 1083 aa15.75■□□□□ 0.11
SMAD9-204ENST00000483941 WNT7AO00755 349 aa15.74■□□□□ 0.11
SMAD9-204ENST00000483941 SLC37A4O43826 429 aa15.74■□□□□ 0.11
SMAD9-204ENST00000483941 NR3C2P08235 984 aa15.74■□□□□ 0.11
SMAD9-204ENST00000483941 EIF2AK2P19525 551 aaKnown RBP15.74■□□□□ 0.11
SMAD9-204ENST00000483941 LRIT3Q3SXY7 679 aa15.74■□□□□ 0.11
SMAD9-204ENST00000483941 CAVIN1Q6NZI2 390 aaKnown RBP15.74■□□□□ 0.11
SMAD9-204ENST00000483941 SHC4Q6S5L8 630 aa15.74■□□□□ 0.11
SMAD9-204ENST00000483941 ELOA2Q8IYF1 753 aaPredicted RBP15.74■□□□□ 0.11
SMAD9-204ENST00000483941 TDHQ8IZJ6 230 aa15.74■□□□□ 0.11
SMAD9-204ENST00000483941 KCTD17Q8N5Z5 321 aa15.74■□□□□ 0.11
SMAD9-204ENST00000483941 GPRASP2Q96D09 838 aa15.74■□□□□ 0.11
SMAD9-204ENST00000483941 CLIC6Q96NY7 704 aa15.74■□□□□ 0.11
SMAD9-204ENST00000483941 RIT2Q99578 217 aa15.74■□□□□ 0.11
SMAD9-204ENST00000483941 WDR11Q9BZH6 1224 aa15.74■□□□□ 0.11
SMAD9-204ENST00000483941 CCSER1Q9C0I3 900 aa15.74■□□□□ 0.11
SMAD9-204ENST00000483941 TMEM60Q9H2L4 133 aa15.74■□□□□ 0.11
SMAD9-204ENST00000483941 TTC12Q9H892 705 aaPredicted RBP15.74■□□□□ 0.11
SMAD9-204ENST00000483941 JADE2Q9NQC1 790 aa15.74■□□□□ 0.11
SMAD9-204ENST00000483941 DACT1Q9NYF0 836 aa15.74■□□□□ 0.11
SMAD9-204ENST00000483941 COL20A1Q9P218 1284 aa15.74■□□□□ 0.11
SMAD9-204ENST00000483941 PRUNE2Q8WUY3 3088 aa15.73■□□□□ 0.11
SMAD9-204ENST00000483941 A0A1B0GVL5 298 aa15.73■□□□□ 0.11
SMAD9-204ENST00000483941 ASB14A6NK59 587 aa15.73■□□□□ 0.11
SMAD9-204ENST00000483941 FAM86B1E9PN63 330 aa15.73■□□□□ 0.11
SMAD9-204ENST00000483941 EIF3JO75822 258 aaKnown RBP15.73■□□□□ 0.11
SMAD9-204ENST00000483941 FAM86B2P0C5J1 330 aa15.73■□□□□ 0.11
SMAD9-204ENST00000483941 MYCLP12524 364 aaPredicted RBP15.73■□□□□ 0.11
SMAD9-204ENST00000483941 PFKFB1P16118 471 aa15.73■□□□□ 0.11
SMAD9-204ENST00000483941 TECP42680 631 aa15.73■□□□□ 0.11
SMAD9-204ENST00000483941 MTMR1Q13613 665 aa15.73■□□□□ 0.11
SMAD9-204ENST00000483941 TPRNQ4KMQ1 711 aa15.73■□□□□ 0.11
SMAD9-204ENST00000483941 KRT79Q5XKE5 535 aa15.73■□□□□ 0.11
SMAD9-204ENST00000483941 KCNV1Q6PIU1 500 aa15.73■□□□□ 0.11
SMAD9-204ENST00000483941 PLEKHH3Q7Z736 793 aa15.73■□□□□ 0.11
SMAD9-204ENST00000483941 FMR1NBQ8N0W7 255 aaPredicted RBP15.73■□□□□ 0.11
SMAD9-204ENST00000483941 IGSF22Q8N9C0 903 aa15.73■□□□□ 0.11
SMAD9-204ENST00000483941 FAM133AQ8N9E0 248 aa15.73■□□□□ 0.11
SMAD9-204ENST00000483941 IQUBQ8NA54 791 aa15.73■□□□□ 0.11
SMAD9-204ENST00000483941 RASSF8Q8NHQ8 419 aa15.73■□□□□ 0.11
SMAD9-204ENST00000483941 CALML4Q96GE6 196 aa15.73■□□□□ 0.11
SMAD9-204ENST00000483941 NUP62CLQ9H1M0 184 aa15.73■□□□□ 0.11
SMAD9-204ENST00000483941 TBC1D22BQ9NU19 505 aa15.73■□□□□ 0.11
SMAD9-204ENST00000483941 MTMR10Q9NXD2 777 aa15.73■□□□□ 0.11
SMAD9-204ENST00000483941 LRWD1Q9UFC0 647 aa15.73■□□□□ 0.11
SMAD9-204ENST00000483941 HPSEQ9Y251 543 aa15.73■□□□□ 0.11
SMAD9-204ENST00000483941 DIS3Q9Y2L1 958 aaKnown RBP15.73■□□□□ 0.11
SMAD9-204ENST00000483941 UBIAD1Q9Y5Z9 338 aa15.73■□□□□ 0.11
SMAD9-204ENST00000483941 PLXNB2O15031 1838 aa15.73■□□□□ 0.11
SMAD9-204ENST00000483941 COL11A1P12107 1806 aaPredicted RBP15.73■□□□□ 0.11
SMAD9-204ENST00000483941 IGLV3-22A0A075B6J6 115 aa15.72■□□□□ 0.11
SMAD9-204ENST00000483941 SLC15A5A6NIM6 579 aa15.72■□□□□ 0.11
SMAD9-204ENST00000483941 EDIL3O43854 480 aa15.72■□□□□ 0.11
SMAD9-204ENST00000483941 ZNF202O95125 648 aa15.72■□□□□ 0.11
SMAD9-204ENST00000483941 HMGCRP04035 888 aa15.72■□□□□ 0.11
SMAD9-204ENST00000483941 SYN1P17600 705 aa15.72■□□□□ 0.11
SMAD9-204ENST00000483941 MAGEA10P43363 369 aaPredicted RBP15.72■□□□□ 0.11
SMAD9-204ENST00000483941 NDUFA8P51970 172 aa15.72■□□□□ 0.11
SMAD9-204ENST00000483941 PDE4DQ08499 809 aa15.72■□□□□ 0.11
SMAD9-204ENST00000483941 HAUS3Q68CZ6 603 aa15.72■□□□□ 0.11
SMAD9-204ENST00000483941 ENGASEQ8NFI3 743 aa15.72■□□□□ 0.11
SMAD9-204ENST00000483941 ETNPPLQ8TBG4 499 aa15.72■□□□□ 0.11
SMAD9-204ENST00000483941 SYMPKQ92797 1274 aaKnown RBP15.72■□□□□ 0.11
SMAD9-204ENST00000483941 SDF4Q9BRK5 362 aa15.72■□□□□ 0.11
SMAD9-204ENST00000483941 ZNF577Q9BSK1 485 aa15.72■□□□□ 0.11
SMAD9-204ENST00000483941 TNMDQ9H2S6 317 aa15.72■□□□□ 0.11
SMAD9-204ENST00000483941 CUEDC2Q9H467 287 aa15.72■□□□□ 0.11
SMAD9-204ENST00000483941 DNAJC25-GNG10A0A024R161 153 aa15.71■□□□□ 0.11
SMAD9-204ENST00000483941 IPO5O00410 1097 aaKnown RBP15.71■□□□□ 0.11
SMAD9-204ENST00000483941 MSH4O15457 936 aa15.71■□□□□ 0.11
SMAD9-204ENST00000483941 GAS7O60861 476 aa15.71■□□□□ 0.11
SMAD9-204ENST00000483941 NR1I2O75469 434 aa15.71■□□□□ 0.11
SMAD9-204ENST00000483941 LIG1P18858 919 aa15.71■□□□□ 0.11
SMAD9-204ENST00000483941 ALDH5A1P51649 535 aaPredicted RBP15.71■□□□□ 0.11
SMAD9-204ENST00000483941 LRCH2Q5VUJ6 765 aa15.71■□□□□ 0.11
SMAD9-204ENST00000483941 ZNF467Q7Z7K2 595 aaPredicted RBP15.71■□□□□ 0.11
SMAD9-204ENST00000483941 CEP57L1Q8IYX8 460 aa15.71■□□□□ 0.11
SMAD9-204ENST00000483941 MSL3Q8N5Y2 521 aaKnown RBP15.71■□□□□ 0.11
SMAD9-204ENST00000483941 GIMAP8Q8ND71 665 aaPredicted RBP15.71■□□□□ 0.11
SMAD9-204ENST00000483941 HAS1Q92839 578 aa15.71■□□□□ 0.11
SMAD9-204ENST00000483941 SLC5A5Q92911 643 aa15.71■□□□□ 0.11
SMAD9-204ENST00000483941 LENG9Q96B70 501 aa15.71■□□□□ 0.11
SMAD9-204ENST00000483941 CDK5RAP3Q96JB5 506 aa15.71■□□□□ 0.11
SMAD9-204ENST00000483941 COL25A1Q9BXS0 654 aaPredicted RBP15.71■□□□□ 0.11
SMAD9-204ENST00000483941 NT5C3AQ9H0P0 336 aa15.71■□□□□ 0.11
SMAD9-204ENST00000483941 CLSTN2Q9H4D0 955 aa15.71■□□□□ 0.11
SMAD9-204ENST00000483941 MAGEF1Q9HAY2 307 aa15.71■□□□□ 0.11
SMAD9-204ENST00000483941 KCNH7Q9NS40 1196 aa15.71■□□□□ 0.11
SMAD9-204ENST00000483941 KDM3AQ9Y4C1 1321 aa15.7■□□□□ 0.1
SMAD9-204ENST00000483941 TGFB3P10600 412 aa15.7■□□□□ 0.1
SMAD9-204ENST00000483941 MRPS9P82933 396 aaKnown RBP15.7■□□□□ 0.1
SMAD9-204ENST00000483941 SNW1Q13573 536 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms