RNA–Protein interactions for RNA: ENST00000483617.5

PTPN18-212, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-212ENST00000483617 RASGRP4Q8TDF6 673 aa12.89□□□□□ -0.35
PTPN18-212ENST00000483617 MORC4Q8TE76 937 aa12.89□□□□□ -0.35
PTPN18-212ENST00000483617 CLEC4DQ8WXI8 215 aa12.89□□□□□ -0.35
PTPN18-212ENST00000483617 TOX2Q96NM4 488 aa12.89□□□□□ -0.35
PTPN18-212ENST00000483617 PURBQ96QR8 312 aaKnown RBP12.89□□□□□ -0.35
PTPN18-212ENST00000483617 VTA1Q9NP79 307 aa12.89□□□□□ -0.35
PTPN18-212ENST00000483617 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.89□□□□□ -0.35
PTPN18-212ENST00000483617 MAP3K20Q9NYL2 800 aaKnown RBP12.89□□□□□ -0.35
PTPN18-212ENST00000483617 ADD3Q9UEY8 706 aaKnown RBP12.89□□□□□ -0.35
PTPN18-212ENST00000483617 GNEQ9Y223 722 aaKnown RBP12.89□□□□□ -0.35
PTPN18-212ENST00000483617 MROH7Q68CQ1 1323 aa12.88□□□□□ -0.35
PTPN18-212ENST00000483617 LOC102724159A0A0B4J2E5 919 aa12.88□□□□□ -0.35
PTPN18-212ENST00000483617 M0R2N6 131 aa12.88□□□□□ -0.35
PTPN18-212ENST00000483617 PIK3CDO00329 1044 aa12.88□□□□□ -0.35
PTPN18-212ENST00000483617 LAD1O00515 517 aa12.88□□□□□ -0.35
PTPN18-212ENST00000483617 KIAA0355O15063 1070 aa12.88□□□□□ -0.35
PTPN18-212ENST00000483617 CTAGE5O15320 804 aa12.88□□□□□ -0.35
PTPN18-212ENST00000483617 MARCH6O60337 910 aa12.88□□□□□ -0.35
PTPN18-212ENST00000483617 CUTAO60888 179 aa12.88□□□□□ -0.35
PTPN18-212ENST00000483617 CFBP00751 764 aa12.88□□□□□ -0.35
PTPN18-212ENST00000483617 GCFC2P16383 781 aaKnown RBP12.88□□□□□ -0.35
PTPN18-212ENST00000483617 ITGB8P26012 769 aa12.88□□□□□ -0.35
PTPN18-212ENST00000483617 ALDH5A1P51649 535 aaPredicted RBP12.88□□□□□ -0.35
PTPN18-212ENST00000483617 PWP2Q15269 919 aaKnown RBP12.88□□□□□ -0.35
PTPN18-212ENST00000483617 UBE2SQ16763 222 aa12.88□□□□□ -0.35
PTPN18-212ENST00000483617 GNASQ5JWF2 1037 aa12.88□□□□□ -0.35
PTPN18-212ENST00000483617 ADALQ6DHV7 355 aa12.88□□□□□ -0.35
PTPN18-212ENST00000483617 TAPT1Q6NXT6 567 aa12.88□□□□□ -0.35
PTPN18-212ENST00000483617 RNF207Q6ZRF8 634 aa12.88□□□□□ -0.35
PTPN18-212ENST00000483617 TBCKQ8TEA7 893 aa12.88□□□□□ -0.35
PTPN18-212ENST00000483617 MAF1Q9H063 256 aa12.88□□□□□ -0.35
PTPN18-212ENST00000483617 TMEM39AQ9NV64 488 aa12.88□□□□□ -0.35
PTPN18-212ENST00000483617 PCDHB6Q9Y5E3 794 aa12.88□□□□□ -0.35
PTPN18-212ENST00000483617 MORC2Q9Y6X9 1032 aaPredicted RBP12.88□□□□□ -0.35
PTPN18-212ENST00000483617 A0A0U1RQG5 324 aaPredicted RBP12.87□□□□□ -0.35
PTPN18-212ENST00000483617 A0A1W2PQ27 194 aa12.87□□□□□ -0.35
PTPN18-212ENST00000483617 A0A1W2PQ64 194 aa12.87□□□□□ -0.35
PTPN18-212ENST00000483617 A0A1W2PQD8 194 aa12.87□□□□□ -0.35
PTPN18-212ENST00000483617 DCDC2CA8MYV0 355 aa12.87□□□□□ -0.35
PTPN18-212ENST00000483617 CCNT1O60563 726 aaKnown RBP12.87□□□□□ -0.35
PTPN18-212ENST00000483617 SMPD1P17405 629 aa12.87□□□□□ -0.35
PTPN18-212ENST00000483617 MCM7P33993 719 aa12.87□□□□□ -0.35
PTPN18-212ENST00000483617 TOB1P50616 345 aaPredicted RBP12.87□□□□□ -0.35
PTPN18-212ENST00000483617 USP11P51784 963 aa12.87□□□□□ -0.35
PTPN18-212ENST00000483617 BEX3Q00994 111 aa12.87□□□□□ -0.35
PTPN18-212ENST00000483617 FAAP100Q0VG06 881 aa12.87□□□□□ -0.35
PTPN18-212ENST00000483617 ZNF174Q15697 407 aa12.87□□□□□ -0.35
PTPN18-212ENST00000483617 LETM2Q2VYF4 491 aa12.87□□□□□ -0.35
PTPN18-212ENST00000483617 IQSEC1Q6DN90 963 aa12.87□□□□□ -0.35
PTPN18-212ENST00000483617 CCDC34Q96HJ3 373 aa12.87□□□□□ -0.35
PTPN18-212ENST00000483617 FTOQ9C0B1 505 aaKnown RBP eCLIP12.87□□□□□ -0.35
PTPN18-212ENST00000483617 PDGFCQ9NRA1 345 aa12.87□□□□□ -0.35
PTPN18-212ENST00000483617 FAM13BQ9NYF5 915 aa12.87□□□□□ -0.35
PTPN18-212ENST00000483617 FAM205CA6NFA0 338 aa12.86□□□□□ -0.35
PTPN18-212ENST00000483617 NEMFO60524 1076 aa12.86□□□□□ -0.35
PTPN18-212ENST00000483617 GADD45BO75293 160 aaPredicted RBP12.86□□□□□ -0.35
PTPN18-212ENST00000483617 RAG1P15918 1043 aa12.86□□□□□ -0.35
PTPN18-212ENST00000483617 PTGS1P23219 599 aa12.86□□□□□ -0.35
PTPN18-212ENST00000483617 MARCKSP29966 332 aaPredicted RBP12.86□□□□□ -0.35
PTPN18-212ENST00000483617 ZNF76P36508 570 aa12.86□□□□□ -0.35
PTPN18-212ENST00000483617 CLK2P49760 499 aaKnown RBP12.86□□□□□ -0.35
PTPN18-212ENST00000483617 CDK7P50613 346 aa12.86□□□□□ -0.35
PTPN18-212ENST00000483617 RPS6P62753 249 aaKnown RBP12.86□□□□□ -0.35
PTPN18-212ENST00000483617 SHHQ15465 462 aa12.86□□□□□ -0.35
PTPN18-212ENST00000483617 FSCN1Q16658 493 aaKnown RBP12.86□□□□□ -0.35
PTPN18-212ENST00000483617 C9orf50Q5SZB4 431 aa12.86□□□□□ -0.35
PTPN18-212ENST00000483617 ARL6IP4Q66PJ3 421 aaKnown RBP12.86□□□□□ -0.35
PTPN18-212ENST00000483617 USP17L6PQ6QN14 398 aa12.86□□□□□ -0.35
PTPN18-212ENST00000483617 Q7L0L9 218 aa12.86□□□□□ -0.35
PTPN18-212ENST00000483617 DEFB123Q8N688 67 aa12.86□□□□□ -0.35
PTPN18-212ENST00000483617 MRPS27Q92552 414 aaKnown RBP12.86□□□□□ -0.35
PTPN18-212ENST00000483617 VTI1AQ96AJ9 217 aa12.86□□□□□ -0.35
PTPN18-212ENST00000483617 MPHOSPH6Q99547 160 aaKnown RBP12.86□□□□□ -0.35
PTPN18-212ENST00000483617 ANO3Q9BYT9 981 aa12.86□□□□□ -0.35
PTPN18-212ENST00000483617 AP5M1Q9H0R1 490 aa12.86□□□□□ -0.35
PTPN18-212ENST00000483617 TMEM260Q9NX78 707 aa12.86□□□□□ -0.35
PTPN18-212ENST00000483617 TBX21Q9UL17 535 aa12.86□□□□□ -0.35
PTPN18-212ENST00000483617 PCDHA7Q9UN72 937 aa12.86□□□□□ -0.35
PTPN18-212ENST00000483617 Q9Y3F1 56 aa12.86□□□□□ -0.35
PTPN18-212ENST00000483617 ARVCFO00192 962 aa12.85□□□□□ -0.35
PTPN18-212ENST00000483617 MEIS2O14770 477 aa12.85□□□□□ -0.35
PTPN18-212ENST00000483617 DYNC1LI2O43237 492 aaPredicted RBP12.85□□□□□ -0.35
PTPN18-212ENST00000483617 ZEB2O60315 1214 aa12.85□□□□□ -0.35
PTPN18-212ENST00000483617 KINO60870 393 aaKnown RBP12.85□□□□□ -0.35
PTPN18-212ENST00000483617 CABYRO75952 493 aa12.85□□□□□ -0.35
PTPN18-212ENST00000483617 LETM1O95202 739 aaPredicted RBP12.85□□□□□ -0.35
PTPN18-212ENST00000483617 CMA1P23946 247 aa12.85□□□□□ -0.35
PTPN18-212ENST00000483617 TXLNAP40222 546 aa12.85□□□□□ -0.35
PTPN18-212ENST00000483617 PTGDRQ13258 359 aa12.85□□□□□ -0.35
PTPN18-212ENST00000483617 PTPAQ15257 358 aa12.85□□□□□ -0.35
PTPN18-212ENST00000483617 TMEM266Q2M3C6 531 aa12.85□□□□□ -0.35
PTPN18-212ENST00000483617 EARS2Q5JPH6 523 aaKnown RBP12.85□□□□□ -0.35
PTPN18-212ENST00000483617 CXCL17Q6UXB2 119 aa12.85□□□□□ -0.35
PTPN18-212ENST00000483617 FCHSD1Q86WN1 690 aa12.85□□□□□ -0.35
PTPN18-212ENST00000483617 FAM126BQ8IXS8 530 aa12.85□□□□□ -0.35
PTPN18-212ENST00000483617 FSIP1Q8NA03 581 aa12.85□□□□□ -0.35
PTPN18-212ENST00000483617 ZNF579Q8NAF0 562 aaKnown RBP12.85□□□□□ -0.35
PTPN18-212ENST00000483617 DNERQ8NFT8 737 aa12.85□□□□□ -0.35
PTPN18-212ENST00000483617 RAB34Q9BZG1 259 aa12.85□□□□□ -0.35
PTPN18-212ENST00000483617 DDX19AQ9NUU7 478 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms