RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 KRT9P35527 623 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 HSD17B3P37058 310 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 MAGOHP61326 146 aaKnown RBP8.54□□□□□ -1.04
COL4A5-205ENST00000483338 UAP1Q16222 522 aaPredicted RBP8.54□□□□□ -1.04
COL4A5-205ENST00000483338 SLC2A7Q6PXP3 512 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 GIGYF2Q6Y7W6 1299 aaKnown RBP8.54□□□□□ -1.04
COL4A5-205ENST00000483338 DAAM2Q86T65 1068 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 SUPT20HQ8NEM7 779 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 MAGOHBQ96A72 148 aaKnown RBP8.54□□□□□ -1.04
COL4A5-205ENST00000483338 ZNF333Q96JL9 665 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 PBKQ96KB5 322 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 NEK1Q96PY6 1258 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 CYP39A1Q9NYL5 469 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 HESX1Q9UBX0 185 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 TSPYL4Q9UJ04 414 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 PNMA3Q9UL41 463 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 PCDH11XQ9BZA7 1347 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 MAGEA13PA6NCF6 341 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 FYB1O15117 783 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 TACC1O75410 805 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 MYCLP1P12525 358 aaPredicted RBP8.54□□□□□ -1.04
COL4A5-205ENST00000483338 FDPSP14324 419 aaKnown RBP8.54□□□□□ -1.04
COL4A5-205ENST00000483338 CXCR5P32302 372 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 MTTPP55157 894 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 NSUN2Q08J23 767 aaKnown RBP eCLIP8.54□□□□□ -1.04
COL4A5-205ENST00000483338 MUM1Q2TAK8 710 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 PUS10Q3MIT2 529 aaKnown RBP8.54□□□□□ -1.04
COL4A5-205ENST00000483338 RNF10Q8N5U6 811 aaKnown RBP8.54□□□□□ -1.04
COL4A5-205ENST00000483338 CASKIN2Q8WXE0 1202 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 GATA6Q92908 595 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 SIKE1Q9BRV8 207 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 OSBPL10Q9BXB5 764 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 TAOK3Q9H2K8 898 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 KIAA1522Q9P206 1035 aaPredicted RBP8.54□□□□□ -1.04
COL4A5-205ENST00000483338 LRCH1Q9Y2L9 728 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 KIF20BQ96Q89 1820 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 RAD21O60216 631 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 HEXIM1O94992 359 aaKnown RBP8.54□□□□□ -1.04
COL4A5-205ENST00000483338 TROVE2P10155 538 aaKnown RBP eCLIP8.54□□□□□ -1.04
COL4A5-205ENST00000483338 CYP4A11Q02928 519 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 MORC3Q14149 939 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 ZNF394Q53GI3 561 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 SYDE2Q5VT97 1194 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 RBBP8NLQ8NC74 664 aaPredicted RBP8.54□□□□□ -1.04
COL4A5-205ENST00000483338 STKLD1Q8NE28 680 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 FERMT2Q96AC1 680 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 PSMB7Q99436 277 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 DUSP9Q99956 384 aaKnown RBP8.54□□□□□ -1.04
COL4A5-205ENST00000483338 NMRK1Q9NWW6 199 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 RABL2AQ9UBK7 228 aaPredicted RBP8.54□□□□□ -1.04
COL4A5-205ENST00000483338 MACROD2A1Z1Q3 448 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 KRT86O43790 486 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 ATP9AO75110 1047 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 PDE6CP51160 858 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 GEMIN4P57678 1058 aaKnown RBP8.53□□□□□ -1.04
COL4A5-205ENST00000483338 TTLL12Q14166 644 aaPredicted RBP8.53□□□□□ -1.04
COL4A5-205ENST00000483338 SLC39A14Q15043 492 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 IMMTQ16891 758 aaKnown RBP8.53□□□□□ -1.04
COL4A5-205ENST00000483338 NFRKBQ6P4R8 1299 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 UHMK1Q8TAS1 419 aaKnown RBP8.53□□□□□ -1.04
COL4A5-205ENST00000483338 DDX23Q9BUQ8 820 aaKnown RBP8.53□□□□□ -1.04
COL4A5-205ENST00000483338 LRRC4CQ9HCJ2 640 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 SNRKQ9NRH2 765 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 HMG20BQ9P0W2 317 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 SAMD15Q9P1V8 674 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 CTTNBP2NLQ9P2B4 639 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 PDP2Q9P2J9 529 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 USP20Q9Y2K6 914 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 STK24Q9Y6E0 443 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 ANKRD26Q9UPS8 1709 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 IFT172Q9UG01 1749 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 FAM237AA0A1B0GTK4 181 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 KIF28PB7ZC32 967 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 TRIM21P19474 475 aaKnown RBP8.53□□□□□ -1.04
COL4A5-205ENST00000483338 CFAP157Q5JU67 520 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 AGBL2Q5U5Z8 902 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 DAB2IPQ5VWQ8 1189 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 ZNF589Q86UQ0 364 aaPredicted RBP8.53□□□□□ -1.04
COL4A5-205ENST00000483338 DZIP1Q86YF9 867 aaKnown RBP8.53□□□□□ -1.04
COL4A5-205ENST00000483338 RAB11FIP4Q86YS3 637 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 ENDOVQ8N8Q3 282 aaKnown RBP8.53□□□□□ -1.04
COL4A5-205ENST00000483338 CENPTQ96BT3 561 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 IFT74Q96LB3 600 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 PURBQ96QR8 312 aaKnown RBP8.53□□□□□ -1.04
COL4A5-205ENST00000483338 KRT23Q9C075 422 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 TUBA8Q9NY65 449 aaPredicted RBP8.53□□□□□ -1.04
COL4A5-205ENST00000483338 A0A1W2PP64 1363 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 RGL2O15211 777 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 CCT6AP40227 531 aaKnown RBP8.53□□□□□ -1.04
COL4A5-205ENST00000483338 PLCD1P51178 756 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 USP11P51784 963 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 SLC39A6Q13433 755 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 RCN1Q15293 331 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 CDKAL1Q5VV42 579 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 ZNF662Q6ZS27 426 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 CXorf38Q8TB03 319 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 PIGOQ8TEQ8 1089 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 CATSPER2Q96P56 530 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 DDX50Q9BQ39 737 aaKnown RBP8.53□□□□□ -1.04
COL4A5-205ENST00000483338 ITGB1BP2Q9UKP3 347 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms