RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 TRPV6Q9H1D0 765 aa17.25■□□□□ 0.35
COL16A1-213ENST00000482910 MEIS1O00470 390 aa17.24■□□□□ 0.35
COL16A1-213ENST00000482910 ATP9AO75110 1047 aa17.24■□□□□ 0.35
COL16A1-213ENST00000482910 PPFIA3O75145 1194 aa17.24■□□□□ 0.35
COL16A1-213ENST00000482910 FXR1P51114 621 aaKnown RBP eCLIP17.24■□□□□ 0.35
COL16A1-213ENST00000482910 NLRP5P59047 1200 aa17.24■□□□□ 0.35
COL16A1-213ENST00000482910 FPGSQ05932 587 aa17.24■□□□□ 0.35
COL16A1-213ENST00000482910 MFSD10Q14728 455 aa17.24■□□□□ 0.35
COL16A1-213ENST00000482910 ME3Q16798 604 aa17.24■□□□□ 0.35
COL16A1-213ENST00000482910 LRIT3Q3SXY7 679 aa17.24■□□□□ 0.35
COL16A1-213ENST00000482910 FAM47CQ5HY64 1035 aa17.24■□□□□ 0.35
COL16A1-213ENST00000482910 DAGLBQ8NCG7 672 aa17.24■□□□□ 0.35
COL16A1-213ENST00000482910 GTF3C6Q969F1 213 aa17.24■□□□□ 0.35
COL16A1-213ENST00000482910 NOC4LQ9BVI4 516 aaKnown RBP17.24■□□□□ 0.35
COL16A1-213ENST00000482910 C22orf23Q9BZE7 217 aa17.24■□□□□ 0.35
COL16A1-213ENST00000482910 HIPK3Q9H422 1215 aa17.24■□□□□ 0.35
COL16A1-213ENST00000482910 BCAS3Q9H6U6 928 aa17.24■□□□□ 0.35
COL16A1-213ENST00000482910 KCNH7Q9NS40 1196 aa17.24■□□□□ 0.35
COL16A1-213ENST00000482910 NFASCO94856 1347 aa17.23■□□□□ 0.35
COL16A1-213ENST00000482910 LGALS2P05162 132 aa17.23■□□□□ 0.35
COL16A1-213ENST00000482910 ZNF286BP0CG31 522 aa17.23■□□□□ 0.35
COL16A1-213ENST00000482910 CIITAP33076 1130 aa17.23■□□□□ 0.35
COL16A1-213ENST00000482910 PPIGQ13427 754 aaKnown RBP eCLIP17.23■□□□□ 0.352e-7■■■■■ 37.5
COL16A1-213ENST00000482910 KIAA0753Q2KHM9 967 aa17.23■□□□□ 0.35
COL16A1-213ENST00000482910 TMEM199Q8N511 208 aa17.23■□□□□ 0.35
COL16A1-213ENST00000482910 KIF2CQ99661 725 aa17.23■□□□□ 0.35
COL16A1-213ENST00000482910 TRMT13Q9NUP7 481 aaKnown RBP17.23■□□□□ 0.35
COL16A1-213ENST00000482910 GTF2IRD1Q9UHL9 959 aa17.23■□□□□ 0.35
COL16A1-213ENST00000482910 PCDHA4Q9UN74 947 aa17.23■□□□□ 0.35
COL16A1-213ENST00000482910 H3BRB1 525 aa17.22■□□□□ 0.35
COL16A1-213ENST00000482910 ADAMTS3O15072 1205 aa17.22■□□□□ 0.35
COL16A1-213ENST00000482910 SORBS3O60504 671 aa17.22■□□□□ 0.35
COL16A1-213ENST00000482910 CTDNEP1O95476 244 aa17.22■□□□□ 0.35
COL16A1-213ENST00000482910 XBP1P17861 261 aa17.22■□□□□ 0.35
COL16A1-213ENST00000482910 ZNF76P36508 570 aa17.22■□□□□ 0.35
COL16A1-213ENST00000482910 SETQ01105 290 aaPredicted RBP17.22■□□□□ 0.35
COL16A1-213ENST00000482910 C7orf31Q8N865 590 aa17.22■□□□□ 0.35
COL16A1-213ENST00000482910 CYP2W1Q8TAV3 490 aa17.22■□□□□ 0.35
COL16A1-213ENST00000482910 WASF1Q92558 559 aa17.22■□□□□ 0.35
COL16A1-213ENST00000482910 TUT1Q9H6E5 874 aaKnown RBP17.22■□□□□ 0.35
COL16A1-213ENST00000482910 UPF2Q9HAU5 1272 aaKnown RBP17.22■□□□□ 0.35
COL16A1-213ENST00000482910 IGLV3-22A0A075B6J6 115 aa17.21■□□□□ 0.35
COL16A1-213ENST00000482910 FAM86B1E9PN63 330 aa17.21■□□□□ 0.35
COL16A1-213ENST00000482910 M0R2N6 131 aa17.21■□□□□ 0.35
COL16A1-213ENST00000482910 PITPNM1O00562 1244 aa17.21■□□□□ 0.35
COL16A1-213ENST00000482910 LARGE1O95461 756 aa17.21■□□□□ 0.35
COL16A1-213ENST00000482910 FAM86B2P0C5J1 330 aa17.21■□□□□ 0.35
COL16A1-213ENST00000482910 USP11P51784 963 aa17.21■□□□□ 0.35
COL16A1-213ENST00000482910 NPY5RQ15761 445 aa17.21■□□□□ 0.35
COL16A1-213ENST00000482910 GDF6Q6KF10 455 aaPredicted RBP17.21■□□□□ 0.35
COL16A1-213ENST00000482910 BLIDQ8IZY5 108 aa17.21■□□□□ 0.35
COL16A1-213ENST00000482910 SEPT1Q8WYJ6 367 aa17.21■□□□□ 0.35
COL16A1-213ENST00000482910 SDF4Q9BRK5 362 aa17.21■□□□□ 0.35
COL16A1-213ENST00000482910 PPP1R12CQ9BZL4 782 aa17.21■□□□□ 0.35
COL16A1-213ENST00000482910 AGO4Q9HCK5 861 aaKnown RBP17.21■□□□□ 0.35
COL16A1-213ENST00000482910 JPH1Q9HDC5 661 aaPredicted RBP17.21■□□□□ 0.35
COL16A1-213ENST00000482910 ORC3Q9UBD5 711 aaPredicted RBP17.21■□□□□ 0.35
COL16A1-213ENST00000482910 HDAC6Q9UBN7 1215 aa17.21■□□□□ 0.35
COL16A1-213ENST00000482910 ZNF215Q9UL58 517 aaPredicted RBP17.21■□□□□ 0.35
COL16A1-213ENST00000482910 LIMCH1Q9UPQ0 1083 aa17.21■□□□□ 0.35
COL16A1-213ENST00000482910 ARP10275 920 aa17.2■□□□□ 0.34
COL16A1-213ENST00000482910 HOXC8P31273 242 aa17.2■□□□□ 0.34
COL16A1-213ENST00000482910 CYP2C18P33260 490 aa17.2■□□□□ 0.34
COL16A1-213ENST00000482910 RBL2Q08999 1139 aa17.2■□□□□ 0.34
COL16A1-213ENST00000482910 BFSP2Q13515 415 aa17.2■□□□□ 0.34
COL16A1-213ENST00000482910 PTGISQ16647 500 aa17.2■□□□□ 0.34
COL16A1-213ENST00000482910 PLA2G4DQ86XP0 818 aa17.2■□□□□ 0.34
COL16A1-213ENST00000482910 NECAB1Q8N987 351 aa17.2■□□□□ 0.34
COL16A1-213ENST00000482910 NSUN7Q8NE18 718 aaKnown RBP17.2■□□□□ 0.34
COL16A1-213ENST00000482910 CAGE1Q8TC20 777 aa17.2■□□□□ 0.34
COL16A1-213ENST00000482910 RASGRP4Q8TDF6 673 aa17.2■□□□□ 0.34
COL16A1-213ENST00000482910 AIFM3Q96NN9 605 aa17.2■□□□□ 0.34
COL16A1-213ENST00000482910 CTAGE1Q96RT6 745 aa17.2■□□□□ 0.34
COL16A1-213ENST00000482910 ALG1Q9BT22 464 aa17.2■□□□□ 0.34
COL16A1-213ENST00000482910 PHF20Q9BVI0 1012 aa17.2■□□□□ 0.34
COL16A1-213ENST00000482910 SLC9A2Q9UBY0 812 aa17.2■□□□□ 0.34
COL16A1-213ENST00000482910 NOD1Q9Y239 953 aa17.2■□□□□ 0.34
COL16A1-213ENST00000482910 EMSYQ7Z589 1322 aa17.2■□□□□ 0.34
COL16A1-213ENST00000482910 TRIP12Q14669 1992 aaPredicted RBP17.19■□□□□ 0.34
COL16A1-213ENST00000482910 TANC1Q9C0D5 1861 aa17.19■□□□□ 0.34
COL16A1-213ENST00000482910 GSTTP1A0A1W2PQM5 241 aa17.19■□□□□ 0.34
COL16A1-213ENST00000482910 CYP2C9P11712 490 aa17.19■□□□□ 0.34
COL16A1-213ENST00000482910 CSF2RAP15509 400 aa17.19■□□□□ 0.34
COL16A1-213ENST00000482910 TCF7P36402 384 aaPredicted RBP17.19■□□□□ 0.34
COL16A1-213ENST00000482910 EPHB4P54760 987 aa17.19■□□□□ 0.34
COL16A1-213ENST00000482910 CHMP4BP1P59074 171 aa17.19■□□□□ 0.34
COL16A1-213ENST00000482910 RABEP1Q15276 862 aa17.19■□□□□ 0.34
COL16A1-213ENST00000482910 SHHQ15465 462 aa17.19■□□□□ 0.34
COL16A1-213ENST00000482910 GPR153Q6NV75 609 aa17.19■□□□□ 0.34
COL16A1-213ENST00000482910 CCDC155Q8N6L0 562 aa17.19■□□□□ 0.34
COL16A1-213ENST00000482910 ZSCAN31Q96LW9 406 aaPredicted RBP17.19■□□□□ 0.34
COL16A1-213ENST00000482910 WNT8AQ9H1J5 351 aa17.19■□□□□ 0.34
COL16A1-213ENST00000482910 IL23AQ9NPF7 189 aa17.19■□□□□ 0.34
COL16A1-213ENST00000482910 KAT6AQ92794 2004 aa17.19■□□□□ 0.34
COL16A1-213ENST00000482910 UMODL1Q5DID0 1318 aa17.19■□□□□ 0.34
COL16A1-213ENST00000482910 LGR5O75473 907 aa17.18■□□□□ 0.34
COL16A1-213ENST00000482910 PFKMP08237 780 aa17.18■□□□□ 0.34
COL16A1-213ENST00000482910 FDPSP14324 419 aaKnown RBP17.18■□□□□ 0.34
COL16A1-213ENST00000482910 RFC2P35250 354 aa17.18■□□□□ 0.34
COL16A1-213ENST00000482910 SP4Q02446 784 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms