RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.87□□□□□ -0.99
SNX13-208ENST00000482558 BRAPQ7Z569 592 aa8.87□□□□□ -0.99
SNX13-208ENST00000482558 MB21D2Q8IYB1 491 aaPredicted RBP8.87□□□□□ -0.99
SNX13-208ENST00000482558 LEO1Q8WVC0 666 aaPredicted RBP8.87□□□□□ -0.99
SNX13-208ENST00000482558 KRT23Q9C075 422 aa8.87□□□□□ -0.99
SNX13-208ENST00000482558 NUP62CLQ9H1M0 184 aa8.87□□□□□ -0.99
SNX13-208ENST00000482558 RNF41Q9H4P4 317 aaPredicted RBP8.87□□□□□ -0.99
SNX13-208ENST00000482558 NOL7Q9UMY1 257 aaKnown RBP8.87□□□□□ -0.99
SNX13-208ENST00000482558 NIP7Q9Y221 180 aaKnown RBP eCLIP8.87□□□□□ -0.99
SNX13-208ENST00000482558 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.87□□□□□ -0.99
SNX13-208ENST00000482558 TCHHQ07283 1943 aa8.87□□□□□ -0.99
SNX13-208ENST00000482558 KAT6BQ8WYB5 2073 aa8.87□□□□□ -0.99
SNX13-208ENST00000482558 PDS5AQ29RF7 1337 aaKnown RBP8.86□□□□□ -0.99
SNX13-208ENST00000482558 PNPLA7Q6ZV29 1317 aa8.86□□□□□ -0.99
SNX13-208ENST00000482558 AKAP11Q9UKA4 1901 aa8.86□□□□□ -0.99
SNX13-208ENST00000482558 CCDC189A1A4V9 331 aa8.86□□□□□ -0.99
SNX13-208ENST00000482558 PTPDC1A2A3K4 754 aa8.86□□□□□ -0.99
SNX13-208ENST00000482558 CPLX1O14810 134 aa8.86□□□□□ -0.99
SNX13-208ENST00000482558 DHX15O43143 795 aaKnown RBP8.86□□□□□ -0.99
SNX13-208ENST00000482558 IDH1O75874 414 aaKnown RBP8.86□□□□□ -0.99
SNX13-208ENST00000482558 NTSR2O95665 410 aa8.86□□□□□ -0.99
SNX13-208ENST00000482558 PDE6AP16499 860 aa8.86□□□□□ -0.99
SNX13-208ENST00000482558 SPINK2P20155 84 aa8.86□□□□□ -0.99
SNX13-208ENST00000482558 CES1P23141 567 aa8.86□□□□□ -0.99
SNX13-208ENST00000482558 SOX18P35713 384 aa8.86□□□□□ -0.99
SNX13-208ENST00000482558 GRIK1P39086 918 aa8.86□□□□□ -0.99
SNX13-208ENST00000482558 APOBRQ0VD83 1088 aa8.86□□□□□ -0.99
SNX13-208ENST00000482558 RAB33AQ14088 237 aa8.86□□□□□ -0.99
SNX13-208ENST00000482558 SART3Q15020 963 aaKnown RBP8.86□□□□□ -0.99
SNX13-208ENST00000482558 KRBA2Q6ZNG9 492 aa8.86□□□□□ -0.99
SNX13-208ENST00000482558 ZDHHC13Q8IUH4 622 aa8.86□□□□□ -0.99
SNX13-208ENST00000482558 C1orf127Q8N9H9 656 aa8.86□□□□□ -0.99
SNX13-208ENST00000482558 WASF1Q92558 559 aa8.86□□□□□ -0.99
SNX13-208ENST00000482558 TCEANC2Q96MN5 208 aa8.86□□□□□ -0.99
SNX13-208ENST00000482558 SENP7Q9BQF6 1050 aa8.86□□□□□ -0.99
SNX13-208ENST00000482558 KRTAP4-7Q9BYR0 210 aa8.86□□□□□ -0.99
SNX13-208ENST00000482558 PUS7LQ9H0K6 701 aaKnown RBP8.86□□□□□ -0.99
SNX13-208ENST00000482558 CHRDQ9H2X0 955 aa8.86□□□□□ -0.99
SNX13-208ENST00000482558 ZFYVE28Q9HCC9 887 aa8.86□□□□□ -0.99
SNX13-208ENST00000482558 RCOR1Q9UKL0 485 aa8.86□□□□□ -0.99
SNX13-208ENST00000482558 ANGEL1Q9UNK9 670 aaKnown RBP8.86□□□□□ -0.99
SNX13-208ENST00000482558 TAF6LQ9Y6J9 622 aa8.86□□□□□ -0.99
SNX13-208ENST00000482558 SPATA31A6Q5VVP1 1343 aa8.85□□□□□ -0.99
SNX13-208ENST00000482558 ZNF532Q9HCE3 1301 aa8.85□□□□□ -0.99
SNX13-208ENST00000482558 LAMA4Q16363 1823 aa8.85□□□□□ -0.99
SNX13-208ENST00000482558 CCDC196A0A1B0GTZ2 297 aa8.85□□□□□ -0.99
SNX13-208ENST00000482558 TCRBV5S4A2TA0A5A2 114 aa8.85□□□□□ -0.99
SNX13-208ENST00000482558 GOLGA6L6A8MZA4 724 aa8.85□□□□□ -0.99
SNX13-208ENST00000482558 MMP20O60882 483 aa8.85□□□□□ -0.99
SNX13-208ENST00000482558 CAND2O75155 1236 aa8.85□□□□□ -0.99
SNX13-208ENST00000482558 GHRHP01286 108 aa8.85□□□□□ -0.99
SNX13-208ENST00000482558 PSAPP07602 524 aa8.85□□□□□ -0.99
SNX13-208ENST00000482558 GNALP38405 381 aa8.85□□□□□ -0.99
SNX13-208ENST00000482558 LIFRP42702 1097 aa8.85□□□□□ -0.99
SNX13-208ENST00000482558 MASP1P48740 699 aa8.85□□□□□ -0.99
SNX13-208ENST00000482558 CAVIN4Q5BKX8 364 aa8.85□□□□□ -0.99
SNX13-208ENST00000482558 GDF6Q6KF10 455 aaPredicted RBP8.85□□□□□ -0.99
SNX13-208ENST00000482558 SYNE3Q6ZMZ3 975 aa8.85□□□□□ -0.99
SNX13-208ENST00000482558 RBM43Q6ZSC3 357 aaKnown RBP8.85□□□□□ -0.99
SNX13-208ENST00000482558 TTC6Q86TZ1 520 aa8.85□□□□□ -0.99
SNX13-208ENST00000482558 SGMS1Q86VZ5 419 aa8.85□□□□□ -0.99
SNX13-208ENST00000482558 ANKRD18AQ8IVF6 992 aa8.85□□□□□ -0.99
SNX13-208ENST00000482558 KCNG4Q8TDN1 519 aa8.85□□□□□ -0.99
SNX13-208ENST00000482558 PMEPA1Q969W9 287 aa8.85□□□□□ -0.99
SNX13-208ENST00000482558 STRBPQ96SI9 672 aaKnown RBP8.85□□□□□ -0.99
SNX13-208ENST00000482558 CEP41Q9BYV8 373 aa8.85□□□□□ -0.99
SNX13-208ENST00000482558 ANKRD2Q9GZV1 360 aa8.85□□□□□ -0.99
SNX13-208ENST00000482558 TNMDQ9H2S6 317 aa8.85□□□□□ -0.99
SNX13-208ENST00000482558 CLSTN2Q9H4D0 955 aa8.85□□□□□ -0.99
SNX13-208ENST00000482558 CNTN3Q9P232 1028 aa8.85□□□□□ -0.99
SNX13-208ENST00000482558 KANSL3Q9P2N6 904 aa8.85□□□□□ -0.99
SNX13-208ENST00000482558 USP25Q9UHP3 1055 aa8.85□□□□□ -0.99
SNX13-208ENST00000482558 COL5A3P25940 1745 aaPredicted RBP8.85□□□□□ -0.99
SNX13-208ENST00000482558 BCORQ6W2J9 1755 aa8.84□□□□□ -0.99
SNX13-208ENST00000482558 A0A1W2PQ27 194 aa8.84□□□□□ -0.99
SNX13-208ENST00000482558 A0A1W2PQ64 194 aa8.84□□□□□ -0.99
SNX13-208ENST00000482558 A0A1W2PQD8 194 aa8.84□□□□□ -0.99
SNX13-208ENST00000482558 EREGO14944 169 aa8.84□□□□□ -0.99
SNX13-208ENST00000482558 ZNF500O60304 480 aaPredicted RBP8.84□□□□□ -0.99
SNX13-208ENST00000482558 JAK2O60674 1132 aa8.84□□□□□ -0.99
SNX13-208ENST00000482558 YEATS4O95619 227 aa8.84□□□□□ -0.99
SNX13-208ENST00000482558 APPP05067 770 aa8.84□□□□□ -0.99
SNX13-208ENST00000482558 HCLS1P14317 486 aaPredicted RBP8.84□□□□□ -0.99
SNX13-208ENST00000482558 PHKA1P46020 1223 aa8.84□□□□□ -0.99
SNX13-208ENST00000482558 TERF1P54274 439 aa8.84□□□□□ -0.99
SNX13-208ENST00000482558 FZD5Q13467 585 aa8.84□□□□□ -0.99
SNX13-208ENST00000482558 ITPK1Q13572 414 aa8.84□□□□□ -0.99
SNX13-208ENST00000482558 CCDC73Q6ZRK6 1079 aa8.84□□□□□ -0.99
SNX13-208ENST00000482558 WDR75Q8IWA0 830 aaKnown RBP8.84□□□□□ -0.99
SNX13-208ENST00000482558 OR13H1Q8NG92 308 aa8.84□□□□□ -0.99
SNX13-208ENST00000482558 BICD2Q8TD16 824 aa8.84□□□□□ -0.99
SNX13-208ENST00000482558 CCDC74AQ96AQ1 378 aa8.84□□□□□ -0.99
SNX13-208ENST00000482558 C8orf76Q96K31 380 aa8.84□□□□□ -0.99
SNX13-208ENST00000482558 UBL7Q96S82 380 aaPredicted RBP8.84□□□□□ -0.99
SNX13-208ENST00000482558 APBA2Q99767 749 aa8.84□□□□□ -0.99
SNX13-208ENST00000482558 NOL10Q9BSC4 688 aaKnown RBP8.84□□□□□ -0.99
SNX13-208ENST00000482558 FUCA2Q9BTY2 467 aa8.84□□□□□ -0.99
SNX13-208ENST00000482558 NAPBQ9H115 298 aa8.84□□□□□ -0.99
SNX13-208ENST00000482558 NPHS2Q9NP85 383 aa8.84□□□□□ -0.99
SNX13-208ENST00000482558 PIH1D3Q9NQM4 214 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms