RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 AMIGO3Q86WK7 504 aa9.14□□□□□ -0.95
CBX3-206ENST00000481057 PI4K2BQ8TCG2 481 aa9.14□□□□□ -0.95
CBX3-206ENST00000481057 ALPK1Q96QP1 1244 aa9.14□□□□□ -0.95
CBX3-206ENST00000481057 CCDC113Q9H0I3 377 aa9.14□□□□□ -0.95
CBX3-206ENST00000481057 MBNL3Q9NUK0 354 aaKnown RBP9.14□□□□□ -0.95
CBX3-206ENST00000481057 OAS3Q9Y6K5 1087 aaKnown RBP9.14□□□□□ -0.95
CBX3-206ENST00000481057 ABCC6O95255 1503 aa9.14□□□□□ -0.95
CBX3-206ENST00000481057 GRB10Q13322 594 aa9.13□□□□□ -0.95
CBX3-206ENST00000481057 RASGRF1Q13972 1273 aa9.13□□□□□ -0.95
CBX3-206ENST00000481057 SV2CQ496J9 727 aa9.13□□□□□ -0.95
CBX3-206ENST00000481057 CWF19L1Q69YN2 538 aaKnown RBP9.13□□□□□ -0.95
CBX3-206ENST00000481057 BVESQ8NE79 360 aa9.13□□□□□ -0.95
CBX3-206ENST00000481057 ST13P5Q8NFI4 369 aaPredicted RBP9.13□□□□□ -0.95
CBX3-206ENST00000481057 MKL1Q969V6 931 aa9.13□□□□□ -0.95
CBX3-206ENST00000481057 LNPKQ9C0E8 428 aa9.13□□□□□ -0.95
CBX3-206ENST00000481057 SLAMF8Q9P0V8 285 aa9.13□□□□□ -0.95
CBX3-206ENST00000481057 AKT3Q9Y243 479 aa9.13□□□□□ -0.95
CBX3-206ENST00000481057 ZNF281Q9Y2X9 895 aa9.13□□□□□ -0.95
CBX3-206ENST00000481057 EMC9Q9Y3B6 208 aa9.13□□□□□ -0.95
CBX3-206ENST00000481057 TIAM2Q8IVF5 1701 aa9.12□□□□□ -0.95
CBX3-206ENST00000481057 SSU72P8A0A1W2PR75 194 aa9.12□□□□□ -0.95
CBX3-206ENST00000481057 TMEM82A0PJX8 343 aa9.12□□□□□ -0.95
CBX3-206ENST00000481057 PDPK1O15530 556 aa9.12□□□□□ -0.95
CBX3-206ENST00000481057 RNASE1P07998 156 aaKnown RBP9.12□□□□□ -0.95
CBX3-206ENST00000481057 VAV1P15498 845 aa9.12□□□□□ -0.95
CBX3-206ENST00000481057 ZNF792Q3KQV3 632 aa9.12□□□□□ -0.95
CBX3-206ENST00000481057 NBPF11Q86T75 865 aa9.12□□□□□ -0.95
CBX3-206ENST00000481057 CRACR2BQ8N4Y2 399 aaPredicted RBP9.12□□□□□ -0.95
CBX3-206ENST00000481057 PPP1R14AQ96A00 147 aa9.12□□□□□ -0.95
CBX3-206ENST00000481057 DEPDC7Q96QD5 511 aa9.12□□□□□ -0.95
CBX3-206ENST00000481057 SNTG2Q9NY99 539 aa9.12□□□□□ -0.95
CBX3-206ENST00000481057 PPIP5K1Q6PFW1 1433 aa9.12□□□□□ -0.95
CBX3-206ENST00000481057 DNAJC25-GNG10A0A024R161 153 aa9.11□□□□□ -0.95
CBX3-206ENST00000481057 FKTNO75072 461 aa9.11□□□□□ -0.95
CBX3-206ENST00000481057 RALGPS1Q5JS13 557 aa9.11□□□□□ -0.95
CBX3-206ENST00000481057 LRP10Q7Z4F1 713 aa9.11□□□□□ -0.95
CBX3-206ENST00000481057 CTU1Q7Z7A3 348 aaKnown RBP9.11□□□□□ -0.95
CBX3-206ENST00000481057 ZNF227Q86WZ6 799 aa9.11□□□□□ -0.95
CBX3-206ENST00000481057 TRIM59Q8IWR1 403 aa9.11□□□□□ -0.95
CBX3-206ENST00000481057 MRGPRX3Q96LB0 322 aa9.11□□□□□ -0.95
CBX3-206ENST00000481057 LGR4Q9BXB1 951 aa9.11□□□□□ -0.95
CBX3-206ENST00000481057 SLC12A9Q9BXP2 914 aa9.11□□□□□ -0.95
CBX3-206ENST00000481057 NOP56O00567 594 aaKnown RBP9.1□□□□□ -0.95
CBX3-206ENST00000481057 ITGAVP06756 1048 aa9.1□□□□□ -0.95
CBX3-206ENST00000481057 CD3EP07766 207 aa9.1□□□□□ -0.95
CBX3-206ENST00000481057 POU4F1Q01851 419 aa9.1□□□□□ -0.95
CBX3-206ENST00000481057 RTP2Q5QGT7 225 aa9.1□□□□□ -0.95
CBX3-206ENST00000481057 CIAPIN1Q6FI81 312 aa9.1□□□□□ -0.95
CBX3-206ENST00000481057 POMZP3Q6PJE2 187 aa9.1□□□□□ -0.95
CBX3-206ENST00000481057 CNTROBQ8N137 903 aa9.1□□□□□ -0.95
CBX3-206ENST00000481057 LRRN4CLQ8ND94 238 aa9.1□□□□□ -0.95
CBX3-206ENST00000481057 ZNF669Q96BR6 464 aaPredicted RBP9.1□□□□□ -0.95
CBX3-206ENST00000481057 TMEM59LQ9UK28 342 aa9.1□□□□□ -0.95
CBX3-206ENST00000481057 RANBP2P49792 3224 aaKnown RBP9.1□□□□□ -0.95
CBX3-206ENST00000481057 BRCA2P51587 3418 aa9.09□□□□□ -0.95
CBX3-206ENST00000481057 RPGRIP1LQ68CZ1 1315 aa9.09□□□□□ -0.95
CBX3-206ENST00000481057 CEP290O15078 2479 aa9.09□□□□□ -0.95
CBX3-206ENST00000481057 YTHDC2Q9H6S0 1430 aaKnown RBP9.09□□□□□ -0.95
CBX3-206ENST00000481057 FAM221BA6H8Z2 402 aa9.09□□□□□ -0.95
CBX3-206ENST00000481057 DDNO94850 711 aaPredicted RBP9.09□□□□□ -0.95
CBX3-206ENST00000481057 KCNH1O95259 989 aa9.09□□□□□ -0.95
CBX3-206ENST00000481057 ENDOUP21128 410 aaKnown RBP9.09□□□□□ -0.95
CBX3-206ENST00000481057 RPL10P27635 214 aaKnown RBP9.09□□□□□ -0.95
CBX3-206ENST00000481057 AMPD2Q01433 879 aa9.09□□□□□ -0.95
CBX3-206ENST00000481057 ZPBP2Q6X784 338 aa9.09□□□□□ -0.95
CBX3-206ENST00000481057 SRPK1Q96SB4 655 aaKnown RBP9.09□□□□□ -0.95
CBX3-206ENST00000481057 MCMBPQ9BTE3 642 aa9.09□□□□□ -0.95
CBX3-206ENST00000481057 TAF1DQ9H5J8 278 aaPredicted RBP9.09□□□□□ -0.95
CBX3-206ENST00000481057 RC3H2Q9HBD1 1191 aaKnown RBP9.09□□□□□ -0.95
CBX3-206ENST00000481057 DDX21Q9NR30 783 aaKnown RBP eCLIP9.09□□□□□ -0.95
CBX3-206ENST00000481057 C19orf73Q9NVV2 129 aa9.09□□□□□ -0.95
CBX3-206ENST00000481057 LRP2BPQ9P2M1 347 aa9.09□□□□□ -0.95
CBX3-206ENST00000481057 C5P01031 1676 aa9.09□□□□□ -0.95
CBX3-206ENST00000481057 CCDC7Q96M83 1385 aa9.09□□□□□ -0.95
CBX3-206ENST00000481057 IQCA1LA6NCM1 817 aa9.08□□□□□ -0.96
CBX3-206ENST00000481057 AGRPO00253 132 aa9.08□□□□□ -0.96
CBX3-206ENST00000481057 TBX1O43435 398 aa9.08□□□□□ -0.96
CBX3-206ENST00000481057 VAMP4O75379 141 aa9.08□□□□□ -0.96
CBX3-206ENST00000481057 ZGLP1P0C6A0 271 aa9.08□□□□□ -0.96
CBX3-206ENST00000481057 IFNGR1P15260 489 aa9.08□□□□□ -0.96
CBX3-206ENST00000481057 CCDC144BQ3MJ40 725 aa9.08□□□□□ -0.96
CBX3-206ENST00000481057 MTERF2Q49AM1 385 aa9.08□□□□□ -0.96
CBX3-206ENST00000481057 CBLL1Q75N03 491 aa9.08□□□□□ -0.96
CBX3-206ENST00000481057 DPH6Q7L8W6 267 aa9.08□□□□□ -0.96
CBX3-206ENST00000481057 CCDC120Q96HB5 630 aa9.08□□□□□ -0.96
CBX3-206ENST00000481057 FCRL3Q96P31 734 aaPredicted RBP9.08□□□□□ -0.96
CBX3-206ENST00000481057 PRAM1Q96QH2 718 aa9.08□□□□□ -0.96
CBX3-206ENST00000481057 G6PC3Q9BUM1 346 aa9.08□□□□□ -0.96
CBX3-206ENST00000481057 CDADC1Q9BWV3 514 aa9.08□□□□□ -0.96
CBX3-206ENST00000481057 ADAMTS10Q9H324 1103 aa9.08□□□□□ -0.96
CBX3-206ENST00000481057 AP5S1Q9NUS5 200 aa9.08□□□□□ -0.96
CBX3-206ENST00000481057 ADGRE2Q9UHX3 823 aa9.08□□□□□ -0.96
CBX3-206ENST00000481057 GSTM1P09488 218 aa9.07□□□□□ -0.96
CBX3-206ENST00000481057 HMGB2P26583 209 aaKnown RBP9.07□□□□□ -0.96
CBX3-206ENST00000481057 NOP2P46087 812 aaKnown RBP9.07□□□□□ -0.96
CBX3-206ENST00000481057 BMS1Q14692 1282 aaKnown RBP9.07□□□□□ -0.96
CBX3-206ENST00000481057 DPY19L1Q2PZI1 675 aa9.07□□□□□ -0.96
CBX3-206ENST00000481057 GTF2IRD2BQ6EKJ0 949 aa9.07□□□□□ -0.96
CBX3-206ENST00000481057 SPATC1Q76KD6 591 aa9.07□□□□□ -0.96
CBX3-206ENST00000481057 GTF2IRD2Q86UP8 949 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms